RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 NOM1Q5C9Z4 860 aaKnown RBP11.75□□□□□ -0.53
SCN8A-203ENST00000545061 NEFHP12036 1026 aa11.73□□□□□ -0.53
SCN8A-203ENST00000545061 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
SCN8A-203ENST00000545061 NOP58Q9Y2X3 529 aaKnown RBP11.71□□□□□ -0.53
SCN8A-203ENST00000545061 DRC7Q8IY82 874 aa11.71□□□□□ -0.54
SCN8A-203ENST00000545061 RRP12Q5JTH9 1297 aaKnown RBP11.7□□□□□ -0.54
SCN8A-203ENST00000545061 GPS2Q13227 327 aa11.68□□□□□ -0.54
SCN8A-203ENST00000545061 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
SCN8A-203ENST00000545061 HNRNPUQ00839 825 aaKnown RBP eCLIP11.67□□□□□ -0.54
SCN8A-203ENST00000545061 HTATSF1O43719 755 aaKnown RBP11.66□□□□□ -0.54
SCN8A-203ENST00000545061 TRIM52Q96A61 297 aa11.66□□□□□ -0.54
SCN8A-203ENST00000545061 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
SCN8A-203ENST00000545061 HMMRO75330 724 aa11.65□□□□□ -0.54
SCN8A-203ENST00000545061 MEX3CQ5U5Q3 659 aaKnown RBP11.65□□□□□ -0.55
SCN8A-203ENST00000545061 DEKP35659 375 aaKnown RBP11.64□□□□□ -0.55
SCN8A-203ENST00000545061 TEX35Q5T0J7 233 aa11.64□□□□□ -0.55
SCN8A-203ENST00000545061 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
SCN8A-203ENST00000545061 SYAP1Q96A49 352 aaPredicted RBP11.62□□□□□ -0.55
SCN8A-203ENST00000545061 FAM50AQ14320 339 aaKnown RBP11.61□□□□□ -0.55
SCN8A-203ENST00000545061 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
SCN8A-203ENST00000545061 NISCHQ9Y2I1 1504 aa11.6□□□□□ -0.55
SCN8A-203ENST00000545061 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
SCN8A-203ENST00000545061 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.58□□□□□ -0.56
SCN8A-203ENST00000545061 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
SCN8A-203ENST00000545061 ZNF771Q7L3S4 317 aaPredicted RBP11.58□□□□□ -0.56
SCN8A-203ENST00000545061 TPM4P67936 248 aa11.58□□□□□ -0.56
SCN8A-203ENST00000545061 HSP90B1P14625 803 aaKnown RBP11.58□□□□□ -0.56
SCN8A-203ENST00000545061 MTERF4Q7Z6M4 381 aaKnown RBP11.57□□□□□ -0.56
SCN8A-203ENST00000545061 CWC15Q9P013 229 aaKnown RBP11.56□□□□□ -0.56
SCN8A-203ENST00000545061 CCDC70Q6NSX1 233 aa11.56□□□□□ -0.56
SCN8A-203ENST00000545061 CHMP4BQ9H444 224 aaKnown RBP11.56□□□□□ -0.56
SCN8A-203ENST00000545061 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
SCN8A-203ENST00000545061 TMC1Q8TDI8 760 aa11.55□□□□□ -0.56
SCN8A-203ENST00000545061 RDXP35241 583 aaKnown RBP11.55□□□□□ -0.56
SCN8A-203ENST00000545061 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
SCN8A-203ENST00000545061 PHF14O94880 888 aa11.54□□□□□ -0.56
SCN8A-203ENST00000545061 HSCBQ8IWL3 235 aa11.54□□□□□ -0.56
SCN8A-203ENST00000545061 CCDC34Q96HJ3 373 aa11.54□□□□□ -0.56
SCN8A-203ENST00000545061 GBP4Q96PP9 640 aa11.54□□□□□ -0.56
SCN8A-203ENST00000545061 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
SCN8A-203ENST00000545061 PKNOX2Q96KN3 472 aa11.53□□□□□ -0.56
SCN8A-203ENST00000545061 CCDC66A2RUB6 948 aa11.52□□□□□ -0.56
SCN8A-203ENST00000545061 MAP7D2Q96T17 732 aa11.52□□□□□ -0.57
SCN8A-203ENST00000545061 PRM3Q9NNZ6 103 aa11.51□□□□□ -0.57
SCN8A-203ENST00000545061 ARID3AQ99856 593 aa11.49□□□□□ -0.57
SCN8A-203ENST00000545061 TAF3Q5VWG9 929 aa11.49□□□□□ -0.57
SCN8A-203ENST00000545061 TULP1O00294 542 aaPredicted RBP11.49□□□□□ -0.57
SCN8A-203ENST00000545061 NEXNQ0ZGT2 675 aa11.48□□□□□ -0.57
SCN8A-203ENST00000545061 MCCP23508 829 aa11.48□□□□□ -0.57
SCN8A-203ENST00000545061 DCTN1Q14203 1278 aa11.48□□□□□ -0.57
SCN8A-203ENST00000545061 SCAF1Q9H7N4 1312 aaKnown RBP11.48□□□□□ -0.57
SCN8A-203ENST00000545061 FAM9BQ8IZU0 186 aa11.47□□□□□ -0.57
SCN8A-203ENST00000545061 CDR1P51861 262 aa11.47□□□□□ -0.57
SCN8A-203ENST00000545061 DYDC1Q8WWB3 177 aa11.47□□□□□ -0.57
SCN8A-203ENST00000545061 FGD1P98174 961 aa11.47□□□□□ -0.57
SCN8A-203ENST00000545061 TPM3P06753 285 aa11.47□□□□□ -0.57
SCN8A-203ENST00000545061 CSPP1Q1MSJ5 1256 aa11.46□□□□□ -0.57
SCN8A-203ENST00000545061 CEP89Q96ST8 783 aa11.46□□□□□ -0.58
SCN8A-203ENST00000545061 INCENPQ9NQS7 918 aa11.45□□□□□ -0.58
SCN8A-203ENST00000545061 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
SCN8A-203ENST00000545061 CLSTN1O94985 981 aa11.45□□□□□ -0.58
SCN8A-203ENST00000545061 TAF7LQ5H9L4 462 aa11.44□□□□□ -0.58
SCN8A-203ENST00000545061 FTSJ3Q8IY81 847 aaKnown RBP11.43□□□□□ -0.58
SCN8A-203ENST00000545061 ACBD3Q9H3P7 528 aa11.43□□□□□ -0.58
SCN8A-203ENST00000545061 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
SCN8A-203ENST00000545061 PATL2C9JE40 543 aaKnown RBP11.42□□□□□ -0.58
SCN8A-203ENST00000545061 MS4A1P11836 297 aa11.42□□□□□ -0.58
SCN8A-203ENST00000545061 AK7Q96M32 723 aa11.42□□□□□ -0.58
SCN8A-203ENST00000545061 TPRNQ4KMQ1 711 aa11.41□□□□□ -0.58
SCN8A-203ENST00000545061 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
SCN8A-203ENST00000545061 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.58
SCN8A-203ENST00000545061 USP8P40818 1118 aa11.4□□□□□ -0.58
SCN8A-203ENST00000545061 ZRSR2Q15696 482 aaKnown RBP11.4□□□□□ -0.58
SCN8A-203ENST00000545061 H0YHG0 523 aa11.39□□□□□ -0.59
SCN8A-203ENST00000545061 PES1O00541 588 aaKnown RBP11.38□□□□□ -0.59
SCN8A-203ENST00000545061 KCNJ4P48050 445 aa11.38□□□□□ -0.59
SCN8A-203ENST00000545061 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
SCN8A-203ENST00000545061 ARGLU1Q9NWB6 273 aaPredicted RBP11.37□□□□□ -0.59
SCN8A-203ENST00000545061 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
SCN8A-203ENST00000545061 RUFY1Q96T51 708 aa11.36□□□□□ -0.59
SCN8A-203ENST00000545061 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
SCN8A-203ENST00000545061 HSP90B2PQ58FF3 399 aa11.35□□□□□ -0.59
SCN8A-203ENST00000545061 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.35□□□□□ -0.59
SCN8A-203ENST00000545061 GOLGA6L7A0A1B0GV03 622 aa11.35□□□□□ -0.59
SCN8A-203ENST00000545061 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.35□□□□□ -0.59
SCN8A-203ENST00000545061 DEF6Q9H4E7 631 aa11.34□□□□□ -0.59
SCN8A-203ENST00000545061 TPM1P09493 284 aa11.33□□□□□ -0.6
SCN8A-203ENST00000545061 TSPYL1Q9H0U9 437 aa11.32□□□□□ -0.6
SCN8A-203ENST00000545061 DDX11L8A8MPP1 907 aa11.31□□□□□ -0.6
SCN8A-203ENST00000545061 HSP90AB3PQ58FF7 597 aa11.29□□□□□ -0.6
SCN8A-203ENST00000545061 MYO6Q9UM54 1294 aa11.29□□□□□ -0.6
SCN8A-203ENST00000545061 SALL2Q9Y467 1007 aaPredicted RBP11.29□□□□□ -0.6
SCN8A-203ENST00000545061 NAP1L2Q9ULW6 460 aaPredicted RBP11.29□□□□□ -0.6
SCN8A-203ENST00000545061 LEKR1Q6ZMV7 388 aa11.28□□□□□ -0.6
SCN8A-203ENST00000545061 ERCC4Q92889 916 aaPredicted RBP11.27□□□□□ -0.6
SCN8A-203ENST00000545061 KIF3AQ9Y496 699 aa11.27□□□□□ -0.6
SCN8A-203ENST00000545061 LOC105371045A0A1W2PR82 267 aa11.27□□□□□ -0.61
SCN8A-203ENST00000545061 TPM2P07951 284 aa11.27□□□□□ -0.61
SCN8A-203ENST00000545061 KIF16BQ96L93 1317 aa11.27□□□□□ -0.61
SCN8A-203ENST00000545061 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms