RNA–Protein interactions for RNA: ENST00000545051.2

SMAD7-202, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 2,211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-202ENST00000545051 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
SMAD7-202ENST00000545051 AQRO60306 1485 aaKnown RBP eCLIP21.36■■□□□ 1.01
SMAD7-202ENST00000545051 PRXQ9BXM0 1461 aa21.36■■□□□ 1.01
SMAD7-202ENST00000545051 ARAP1Q96P48 1450 aa21.31■■□□□ 1
SMAD7-202ENST00000545051 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
SMAD7-202ENST00000545051 ABCA5Q8WWZ7 1642 aa21.3■■□□□ 1
SMAD7-202ENST00000545051 CLSPNQ9HAW4 1339 aa21.3■■□□□ 1
SMAD7-202ENST00000545051 GRIN2BQ13224 1484 aa21.28■■□□□ 1
SMAD7-202ENST00000545051 PBRM1Q86U86 1689 aa21.26■□□□□ 0.99
SMAD7-202ENST00000545051 MIER1Q8N108 512 aa21.24■□□□□ 0.99
SMAD7-202ENST00000545051 RANGAP1P46060 587 aaPredicted RBP21.23■□□□□ 0.99
SMAD7-202ENST00000545051 KIF27Q86VH2 1401 aa21.22■□□□□ 0.99
SMAD7-202ENST00000545051 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
SMAD7-202ENST00000545051 YTHDC1Q96MU7 727 aaKnown RBP21.2■□□□□ 0.98
SMAD7-202ENST00000545051 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
SMAD7-202ENST00000545051 DHX57Q6P158 1386 aaKnown RBP21.19■□□□□ 0.98
SMAD7-202ENST00000545051 RRBP1Q9P2E9 1410 aaKnown RBP21.18■□□□□ 0.98
SMAD7-202ENST00000545051 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
SMAD7-202ENST00000545051 CHD1O14646 1710 aa21.1■□□□□ 0.97
SMAD7-202ENST00000545051 FBLN2P98095 1184 aa21.1■□□□□ 0.97
SMAD7-202ENST00000545051 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
SMAD7-202ENST00000545051 ADAMTS12P58397 1594 aa21.08■□□□□ 0.97
SMAD7-202ENST00000545051 KANK4Q5T7N3 995 aaPredicted RBP21.08■□□□□ 0.97
SMAD7-202ENST00000545051 OSCARQ8IYS5 282 aa21.08■□□□□ 0.97
SMAD7-202ENST00000545051 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.96
SMAD7-202ENST00000545051 ARHGAP35Q9NRY4 1499 aa21.08■□□□□ 0.96
SMAD7-202ENST00000545051 IGF1RP08069 1367 aa21.05■□□□□ 0.96
SMAD7-202ENST00000545051 CUL7Q14999 1698 aa21.05■□□□□ 0.96
SMAD7-202ENST00000545051 CCNB3Q8WWL7 1395 aa21.03■□□□□ 0.96
SMAD7-202ENST00000545051 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
SMAD7-202ENST00000545051 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
SMAD7-202ENST00000545051 MYT1Q01538 1121 aa20.98■□□□□ 0.95
SMAD7-202ENST00000545051 TIAM1Q13009 1591 aa20.97■□□□□ 0.95
SMAD7-202ENST00000545051 DNAJC5Q9H3Z4 198 aa20.97■□□□□ 0.95
SMAD7-202ENST00000545051 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
SMAD7-202ENST00000545051 CFAP43Q8NDM7 1665 aa20.88■□□□□ 0.93
SMAD7-202ENST00000545051 NUP160Q12769 1436 aa20.88■□□□□ 0.93
SMAD7-202ENST00000545051 CLASP1Q7Z460 1538 aa20.86■□□□□ 0.93
SMAD7-202ENST00000545051 CEP170Q5SW79 1584 aa20.86■□□□□ 0.93
SMAD7-202ENST00000545051 MAPKBP1O60336 1514 aa20.85■□□□□ 0.93
SMAD7-202ENST00000545051 RAB3GAP2Q9H2M9 1393 aa20.83■□□□□ 0.93
SMAD7-202ENST00000545051 LRRC9Q6ZRR7 1453 aa20.83■□□□□ 0.92
SMAD7-202ENST00000545051 PCF11O94913 1555 aaKnown RBP20.78■□□□□ 0.92
SMAD7-202ENST00000545051 SETD5Q9C0A6 1442 aa20.78■□□□□ 0.92
SMAD7-202ENST00000545051 ITGAEP38570 1179 aa20.77■□□□□ 0.91
SMAD7-202ENST00000545051 KIAA0586Q9BVV6 1533 aa20.75■□□□□ 0.91
SMAD7-202ENST00000545051 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
SMAD7-202ENST00000545051 EFCAB5A4FU69 1503 aa20.71■□□□□ 0.91
SMAD7-202ENST00000545051 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
SMAD7-202ENST00000545051 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
SMAD7-202ENST00000545051 RIMBP3CA6NJZ7 1639 aa20.69■□□□□ 0.9
SMAD7-202ENST00000545051 RIMBP3BA6NNM3 1639 aa20.69■□□□□ 0.9
SMAD7-202ENST00000545051 RIMBP3Q9UFD9 1639 aa20.69■□□□□ 0.9
SMAD7-202ENST00000545051 SUPT16HQ9Y5B9 1047 aaKnown RBP20.69■□□□□ 0.9
SMAD7-202ENST00000545051 FYCO1Q9BQS8 1478 aa20.69■□□□□ 0.9
SMAD7-202ENST00000545051 CTTNBP2Q8WZ74 1663 aa20.68■□□□□ 0.9
SMAD7-202ENST00000545051 IQGAP2Q13576 1575 aa20.68■□□□□ 0.9
SMAD7-202ENST00000545051 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
SMAD7-202ENST00000545051 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.63■□□□□ 0.89
SMAD7-202ENST00000545051 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
SMAD7-202ENST00000545051 TIMELESSQ9UNS1 1208 aa20.61■□□□□ 0.89
SMAD7-202ENST00000545051 CASKIN1Q8WXD9 1431 aa20.61■□□□□ 0.89
SMAD7-202ENST00000545051 FAM50AQ14320 339 aaKnown RBP20.6■□□□□ 0.89
SMAD7-202ENST00000545051 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.89
SMAD7-202ENST00000545051 CARMIL2Q6F5E8 1435 aa20.57■□□□□ 0.88
SMAD7-202ENST00000545051 UGGT2Q9NYU1 1516 aa20.56■□□□□ 0.88
SMAD7-202ENST00000545051 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
SMAD7-202ENST00000545051 FMN1Q68DA7 1419 aa20.51■□□□□ 0.87
SMAD7-202ENST00000545051 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
SMAD7-202ENST00000545051 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
SMAD7-202ENST00000545051 CYB5RLQ6IPT4 315 aa20.5■□□□□ 0.87
SMAD7-202ENST00000545051 FGD6Q6ZV73 1430 aa20.48■□□□□ 0.87
SMAD7-202ENST00000545051 ATP1B4Q9UN42 357 aaPredicted RBP20.47■□□□□ 0.87
SMAD7-202ENST00000545051 DISP1Q96F81 1524 aa20.47■□□□□ 0.87
SMAD7-202ENST00000545051 KIAA0556O60303 1618 aa20.47■□□□□ 0.87
SMAD7-202ENST00000545051 SAMD9Q5K651 1589 aa20.46■□□□□ 0.87
SMAD7-202ENST00000545051 KCNH8Q96L42 1107 aa20.46■□□□□ 0.87
SMAD7-202ENST00000545051 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
SMAD7-202ENST00000545051 CCDC18Q5T9S5 1454 aa20.44■□□□□ 0.86
SMAD7-202ENST00000545051 PPP1R15AO75807 674 aaPredicted RBP20.44■□□□□ 0.86
SMAD7-202ENST00000545051 PTPN23Q9H3S7 1636 aa20.43■□□□□ 0.86
SMAD7-202ENST00000545051 LRRIQ1Q96JM4 1722 aa20.42■□□□□ 0.86
SMAD7-202ENST00000545051 PTPRGP23470 1445 aa20.42■□□□□ 0.86
SMAD7-202ENST00000545051 HFM1A2PYH4 1435 aa20.41■□□□□ 0.86
SMAD7-202ENST00000545051 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
SMAD7-202ENST00000545051 SUPT6HQ7KZ85 1726 aaKnown RBP20.39■□□□□ 0.85
SMAD7-202ENST00000545051 CCER2I3L3R5 266 aa20.39■□□□□ 0.85
SMAD7-202ENST00000545051 MTUS2Q5JR59 1369 aa20.38■□□□□ 0.85
SMAD7-202ENST00000545051 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
SMAD7-202ENST00000545051 TSHZ2Q9NRE2 1034 aa20.38■□□□□ 0.85
SMAD7-202ENST00000545051 EHBP1L1Q8N3D4 1523 aa20.37■□□□□ 0.85
SMAD7-202ENST00000545051 MYOM3Q5VTT5 1437 aa20.34■□□□□ 0.85
SMAD7-202ENST00000545051 ANP32CO43423 234 aa20.34■□□□□ 0.85
SMAD7-202ENST00000545051 NCOA2Q15596 1464 aa20.33■□□□□ 0.85
SMAD7-202ENST00000545051 PTPRKQ15262 1439 aa20.31■□□□□ 0.84
SMAD7-202ENST00000545051 NAIPQ13075 1403 aa20.3■□□□□ 0.84
SMAD7-202ENST00000545051 GCC2Q8IWJ2 1684 aa20.29■□□□□ 0.84
SMAD7-202ENST00000545051 UHRF1BP1LA0JNW5 1464 aa20.26■□□□□ 0.83
SMAD7-202ENST00000545051 ADCY10Q96PN6 1610 aa20.26■□□□□ 0.83
SMAD7-202ENST00000545051 FKBP8Q14318 412 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms