RNA–Protein interactions for RNA: ENST00000545028.2

KLHL1-202, Transcript of kelch like family member 1, humanhuman

TSL 2 BASIC

Gene KLHL1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1-202ENST00000545028 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
KLHL1-202ENST00000545028 VPS8Q8N3P4 1428 aa14.06□□□□□ -0.16
KLHL1-202ENST00000545028 EIF4G3O43432 1585 aaKnown RBP14.06□□□□□ -0.16
KLHL1-202ENST00000545028 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
KLHL1-202ENST00000545028 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
KLHL1-202ENST00000545028 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
KLHL1-202ENST00000545028 APLP2Q06481 763 aa14.04□□□□□ -0.16
KLHL1-202ENST00000545028 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
KLHL1-202ENST00000545028 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
KLHL1-202ENST00000545028 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
KLHL1-202ENST00000545028 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
KLHL1-202ENST00000545028 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
KLHL1-202ENST00000545028 ARHGAP35Q9NRY4 1499 aa13.99□□□□□ -0.17
KLHL1-202ENST00000545028 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
KLHL1-202ENST00000545028 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
KLHL1-202ENST00000545028 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
KLHL1-202ENST00000545028 CUL7Q14999 1698 aa13.92□□□□□ -0.18
KLHL1-202ENST00000545028 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.18
KLHL1-202ENST00000545028 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
KLHL1-202ENST00000545028 PRG4Q92954 1404 aaPredicted RBP13.88□□□□□ -0.19
KLHL1-202ENST00000545028 CARMIL2Q6F5E8 1435 aa13.88□□□□□ -0.19
KLHL1-202ENST00000545028 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
KLHL1-202ENST00000545028 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
KLHL1-202ENST00000545028 KCNH8Q96L42 1107 aa13.84□□□□□ -0.19
KLHL1-202ENST00000545028 FHOD3Q2V2M9 1422 aa13.84□□□□□ -0.19
KLHL1-202ENST00000545028 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.19
KLHL1-202ENST00000545028 DNAJC5Q9H3Z4 198 aa13.83□□□□□ -0.2
KLHL1-202ENST00000545028 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
KLHL1-202ENST00000545028 PTPRGP23470 1445 aa13.82□□□□□ -0.2
KLHL1-202ENST00000545028 CHD1O14646 1710 aa13.81□□□□□ -0.2
KLHL1-202ENST00000545028 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
KLHL1-202ENST00000545028 PCF11O94913 1555 aaKnown RBP13.78□□□□□ -0.2
KLHL1-202ENST00000545028 NUP160Q12769 1436 aa13.76□□□□□ -0.21
KLHL1-202ENST00000545028 ZEB1P37275 1124 aaPredicted RBP13.76□□□□□ -0.21
KLHL1-202ENST00000545028 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
KLHL1-202ENST00000545028 EFCAB5A4FU69 1503 aa13.75□□□□□ -0.21
KLHL1-202ENST00000545028 TIAM1Q13009 1591 aa13.74□□□□□ -0.21
KLHL1-202ENST00000545028 IQGAP2Q13576 1575 aa13.74□□□□□ -0.21
KLHL1-202ENST00000545028 CDK11AQ9UQ88 783 aaPredicted RBP13.73□□□□□ -0.21
KLHL1-202ENST00000545028 PLEKHD1A6NEE1 506 aa13.72□□□□□ -0.21
KLHL1-202ENST00000545028 SAMD9Q5K651 1589 aa13.71□□□□□ -0.21
KLHL1-202ENST00000545028 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
KLHL1-202ENST00000545028 LRRC9Q6ZRR7 1453 aa13.69□□□□□ -0.22
KLHL1-202ENST00000545028 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
KLHL1-202ENST00000545028 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
KLHL1-202ENST00000545028 CFAP43Q8NDM7 1665 aa13.67□□□□□ -0.22
KLHL1-202ENST00000545028 FYCO1Q9BQS8 1478 aa13.67□□□□□ -0.22
KLHL1-202ENST00000545028 MAP3K1Q13233 1512 aa13.67□□□□□ -0.22
KLHL1-202ENST00000545028 RRBP1Q9P2E9 1410 aaKnown RBP13.67□□□□□ -0.22
KLHL1-202ENST00000545028 FMN1Q68DA7 1419 aa13.66□□□□□ -0.22
KLHL1-202ENST00000545028 ITGAEP38570 1179 aa13.66□□□□□ -0.22
KLHL1-202ENST00000545028 LRRIQ1Q96JM4 1722 aa13.66□□□□□ -0.22
KLHL1-202ENST00000545028 PHLDB1Q86UU1 1377 aa13.65□□□□□ -0.22
KLHL1-202ENST00000545028 CCNB3Q8WWL7 1395 aa13.64□□□□□ -0.23
KLHL1-202ENST00000545028 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
KLHL1-202ENST00000545028 ERCC6L2Q5T890 1561 aa13.63□□□□□ -0.23
KLHL1-202ENST00000545028 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
KLHL1-202ENST00000545028 PLB1Q6P1J6 1458 aa13.62□□□□□ -0.23
KLHL1-202ENST00000545028 FAM69CQ0P6D2 419 aa13.61□□□□□ -0.23
KLHL1-202ENST00000545028 UACAQ9BZF9 1416 aa13.59□□□□□ -0.23
KLHL1-202ENST00000545028 FAM50AQ14320 339 aaKnown RBP13.59□□□□□ -0.23
KLHL1-202ENST00000545028 DISP1Q96F81 1524 aa13.59□□□□□ -0.23
KLHL1-202ENST00000545028 UGGT2Q9NYU1 1516 aa13.57□□□□□ -0.24
KLHL1-202ENST00000545028 CLASP1Q7Z460 1538 aa13.56□□□□□ -0.24
KLHL1-202ENST00000545028 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
KLHL1-202ENST00000545028 KIAA0556O60303 1618 aa13.54□□□□□ -0.24
KLHL1-202ENST00000545028 CDK13Q14004 1512 aaKnown RBP13.52□□□□□ -0.24
KLHL1-202ENST00000545028 RIMBP3CA6NJZ7 1639 aa13.52□□□□□ -0.25
KLHL1-202ENST00000545028 RIMBP3BA6NNM3 1639 aa13.52□□□□□ -0.25
KLHL1-202ENST00000545028 RIMBP3Q9UFD9 1639 aa13.52□□□□□ -0.25
KLHL1-202ENST00000545028 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
KLHL1-202ENST00000545028 CFDP1Q9UEE9 299 aaPredicted RBP13.5□□□□□ -0.25
KLHL1-202ENST00000545028 EPRSP07814 1512 aaKnown RBP13.5□□□□□ -0.25
KLHL1-202ENST00000545028 HECW1Q76N89 1606 aa13.5□□□□□ -0.25
KLHL1-202ENST00000545028 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
KLHL1-202ENST00000545028 NCOA2Q15596 1464 aa13.49□□□□□ -0.25
KLHL1-202ENST00000545028 FGD6Q6ZV73 1430 aa13.47□□□□□ -0.25
KLHL1-202ENST00000545028 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
KLHL1-202ENST00000545028 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.25
KLHL1-202ENST00000545028 EHBP1L1Q8N3D4 1523 aa13.46□□□□□ -0.25
KLHL1-202ENST00000545028 SUPT6HQ7KZ85 1726 aaKnown RBP13.46□□□□□ -0.26
KLHL1-202ENST00000545028 NUP153P49790 1475 aaKnown RBP13.44□□□□□ -0.26
KLHL1-202ENST00000545028 CHIC2Q9UKJ5 165 aa13.44□□□□□ -0.26
KLHL1-202ENST00000545028 ATP10BO94823 1461 aa13.43□□□□□ -0.26
KLHL1-202ENST00000545028 RAPGEF6Q8TEU7 1601 aa13.43□□□□□ -0.26
KLHL1-202ENST00000545028 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
KLHL1-202ENST00000545028 ASXL2Q76L83 1435 aa13.42□□□□□ -0.26
KLHL1-202ENST00000545028 PTPRKQ15262 1439 aa13.41□□□□□ -0.26
KLHL1-202ENST00000545028 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
KLHL1-202ENST00000545028 SETD5Q9C0A6 1442 aa13.41□□□□□ -0.26
KLHL1-202ENST00000545028 ABCC2Q92887 1545 aa13.4□□□□□ -0.26
KLHL1-202ENST00000545028 SHROOM2Q13796 1616 aa13.4□□□□□ -0.26
KLHL1-202ENST00000545028 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.27
KLHL1-202ENST00000545028 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
KLHL1-202ENST00000545028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.38□□□□□ -0.27
KLHL1-202ENST00000545028 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
KLHL1-202ENST00000545028 TSPY4P0CV99 314 aa13.37□□□□□ -0.27
KLHL1-202ENST00000545028 TSPY10P0CW01 314 aa13.37□□□□□ -0.27
KLHL1-202ENST00000545028 ZNF644Q9H582 1327 aaPredicted RBP13.36□□□□□ -0.27
KLHL1-202ENST00000545028 TROQ12816 1431 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms