RNA–Protein interactions for RNA: ENST00000544916.5

PHC1-214, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 3,626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-214ENST00000544916 ANP32CO43423 234 aa14.47□□□□□ -0.09
PHC1-214ENST00000544916 KIF27Q86VH2 1401 aa14.46□□□□□ -0.1
PHC1-214ENST00000544916 RAD54L2Q9Y4B4 1467 aa14.45□□□□□ -0.1
PHC1-214ENST00000544916 HNRNPUQ00839 825 aaKnown RBP eCLIP14.45□□□□□ -0.1
PHC1-214ENST00000544916 TDRD9Q8NDG6 1382 aaKnown RBP14.45□□□□□ -0.1
PHC1-214ENST00000544916 NBR1Q14596 966 aa14.44□□□□□ -0.1
PHC1-214ENST00000544916 CFTRP13569 1480 aa14.44□□□□□ -0.1
PHC1-214ENST00000544916 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
PHC1-214ENST00000544916 FBLN2P98095 1184 aa14.41□□□□□ -0.1
PHC1-214ENST00000544916 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
PHC1-214ENST00000544916 CARMIL1Q5VZK9 1371 aa14.38□□□□□ -0.11
PHC1-214ENST00000544916 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
PHC1-214ENST00000544916 FGD5Q6ZNL6 1462 aa14.38□□□□□ -0.11
PHC1-214ENST00000544916 CLSPNQ9HAW4 1339 aa14.37□□□□□ -0.11
PHC1-214ENST00000544916 TOP2BQ02880 1626 aa14.37□□□□□ -0.11
PHC1-214ENST00000544916 IGF1RP08069 1367 aa14.37□□□□□ -0.11
PHC1-214ENST00000544916 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
PHC1-214ENST00000544916 FAM9BQ8IZU0 186 aa14.33□□□□□ -0.11
PHC1-214ENST00000544916 DHX57Q6P158 1386 aaKnown RBP14.32□□□□□ -0.12
PHC1-214ENST00000544916 KIF21BO75037 1637 aa14.31□□□□□ -0.12
PHC1-214ENST00000544916 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
PHC1-214ENST00000544916 PRXQ9BXM0 1461 aa14.27□□□□□ -0.12
PHC1-214ENST00000544916 B4GALNT3Q6L9W6 998 aa14.27□□□□□ -0.13
PHC1-214ENST00000544916 NPM2Q86SE8 214 aaKnown RBP14.26□□□□□ -0.13
PHC1-214ENST00000544916 FHOD3Q2V2M9 1422 aa14.25□□□□□ -0.13
PHC1-214ENST00000544916 RTN4Q9NQC3 1192 aaKnown RBP14.24□□□□□ -0.13
PHC1-214ENST00000544916 ZNF326Q5BKZ1 582 aaKnown RBP14.21□□□□□ -0.14
PHC1-214ENST00000544916 RTL5Q5HYW3 569 aaPredicted RBP14.2□□□□□ -0.14
PHC1-214ENST00000544916 CHIC2Q9UKJ5 165 aa14.2□□□□□ -0.14
PHC1-214ENST00000544916 POLA1P09884 1462 aaPredicted RBP14.2□□□□□ -0.14
PHC1-214ENST00000544916 ARHGAP35Q9NRY4 1499 aa14.2□□□□□ -0.14
PHC1-214ENST00000544916 SALL2Q9Y467 1007 aaPredicted RBP14.19□□□□□ -0.14
PHC1-214ENST00000544916 MSH5O43196 834 aa14.19□□□□□ -0.14
PHC1-214ENST00000544916 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
PHC1-214ENST00000544916 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
PHC1-214ENST00000544916 AQRO60306 1485 aaKnown RBP eCLIP14.17□□□□□ -0.14
PHC1-214ENST00000544916 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
PHC1-214ENST00000544916 RAB3GAP2Q9H2M9 1393 aa14.16□□□□□ -0.14
PHC1-214ENST00000544916 DEKP35659 375 aaKnown RBP14.16□□□□□ -0.14
PHC1-214ENST00000544916 CCNB3Q8WWL7 1395 aa14.15□□□□□ -0.14
PHC1-214ENST00000544916 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
PHC1-214ENST00000544916 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
PHC1-214ENST00000544916 PDS5BQ9NTI5 1447 aa14.12□□□□□ -0.15
PHC1-214ENST00000544916 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.15
PHC1-214ENST00000544916 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
PHC1-214ENST00000544916 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
PHC1-214ENST00000544916 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
PHC1-214ENST00000544916 MTUS2Q5JR59 1369 aa14.06□□□□□ -0.16
PHC1-214ENST00000544916 PHLDB1Q86UU1 1377 aa14.06□□□□□ -0.16
PHC1-214ENST00000544916 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
PHC1-214ENST00000544916 CCDC136Q96JN2 1154 aa14.06□□□□□ -0.16
PHC1-214ENST00000544916 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
PHC1-214ENST00000544916 ANP32AP39687 249 aaKnown RBP14.05□□□□□ -0.16
PHC1-214ENST00000544916 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
PHC1-214ENST00000544916 PPP1R15AO75807 674 aaPredicted RBP14.02□□□□□ -0.16
PHC1-214ENST00000544916 FOXD1Q16676 465 aa14.02□□□□□ -0.16
PHC1-214ENST00000544916 EIF5BO60841 1220 aaKnown RBP14.02□□□□□ -0.17
PHC1-214ENST00000544916 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.17
PHC1-214ENST00000544916 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
PHC1-214ENST00000544916 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
PHC1-214ENST00000544916 ZBTB47Q9UFB7 747 aaPredicted RBP14□□□□□ -0.17
PHC1-214ENST00000544916 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
PHC1-214ENST00000544916 CCDC184Q52MB2 194 aa13.99□□□□□ -0.17
PHC1-214ENST00000544916 PPP4R2Q9NY27 417 aa13.99□□□□□ -0.17
PHC1-214ENST00000544916 CCER2I3L3R5 266 aa13.98□□□□□ -0.17
PHC1-214ENST00000544916 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
PHC1-214ENST00000544916 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
PHC1-214ENST00000544916 SETD5Q9C0A6 1442 aa13.96□□□□□ -0.17
PHC1-214ENST00000544916 ANO8Q9HCE9 1232 aaPredicted RBP13.96□□□□□ -0.18
PHC1-214ENST00000544916 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
PHC1-214ENST00000544916 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
PHC1-214ENST00000544916 FHAD1B1AJZ9 1412 aa13.93□□□□□ -0.18
PHC1-214ENST00000544916 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
PHC1-214ENST00000544916 DAXXQ9UER7 740 aaPredicted RBP13.93□□□□□ -0.18
PHC1-214ENST00000544916 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
PHC1-214ENST00000544916 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
PHC1-214ENST00000544916 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
PHC1-214ENST00000544916 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
PHC1-214ENST00000544916 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
PHC1-214ENST00000544916 ARXQ96QS3 562 aa13.9□□□□□ -0.18
PHC1-214ENST00000544916 FANCIQ9NVI1 1328 aa13.87□□□□□ -0.19
PHC1-214ENST00000544916 NEFMP07197 916 aa13.86□□□□□ -0.19
PHC1-214ENST00000544916 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
PHC1-214ENST00000544916 TMC1Q8TDI8 760 aa13.86□□□□□ -0.19
PHC1-214ENST00000544916 RRBP1Q9P2E9 1410 aaKnown RBP13.85□□□□□ -0.19
PHC1-214ENST00000544916 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
PHC1-214ENST00000544916 PRDM2Q13029 1718 aa13.84□□□□□ -0.19
PHC1-214ENST00000544916 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.19
PHC1-214ENST00000544916 FMN1Q68DA7 1419 aa13.83□□□□□ -0.2
PHC1-214ENST00000544916 PRKCSHP14314 528 aaPredicted RBP13.83□□□□□ -0.2
PHC1-214ENST00000544916 JPH4Q96JJ6 628 aa13.83□□□□□ -0.2
PHC1-214ENST00000544916 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
PHC1-214ENST00000544916 CDK13Q14004 1512 aaKnown RBP13.81□□□□□ -0.2
PHC1-214ENST00000544916 SNAPC4Q5SXM2 1469 aa13.81□□□□□ -0.2
PHC1-214ENST00000544916 WASHC2AQ641Q2 1341 aa13.8□□□□□ -0.2
PHC1-214ENST00000544916 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
PHC1-214ENST00000544916 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
PHC1-214ENST00000544916 SLC4A3P48751 1232 aa13.78□□□□□ -0.2
PHC1-214ENST00000544916 MYT1LQ9UL68 1186 aa13.78□□□□□ -0.2
PHC1-214ENST00000544916 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms