RNA–Protein interactions for RNA: ENST00000544537.2

PRTN3-202, Transcript of proteinase 3, humanhuman

TSL 1 (best) BASIC

Gene PRTN3, Length 1,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRTN3-202ENST00000544537 SHROOM2Q13796 1616 aa30.63■■■□□ 2.49
PRTN3-202ENST00000544537 ARHGEF11O15085 1522 aa30.63■■■□□ 2.49
PRTN3-202ENST00000544537 RIMBP3CA6NJZ7 1639 aa30.61■■■□□ 2.49
PRTN3-202ENST00000544537 RIMBP3BA6NNM3 1639 aa30.61■■■□□ 2.49
PRTN3-202ENST00000544537 RIMBP3Q9UFD9 1639 aa30.61■■■□□ 2.49
PRTN3-202ENST00000544537 CTTNBP2Q8WZ74 1663 aa30.6■■■□□ 2.49
PRTN3-202ENST00000544537 IQGAP2Q13576 1575 aa30.56■■■□□ 2.48
PRTN3-202ENST00000544537 JPH4Q96JJ6 628 aa30.48■■■□□ 2.47
PRTN3-202ENST00000544537 ERCC6L2Q5T890 1561 aa30.46■■■□□ 2.47
PRTN3-202ENST00000544537 PRG4Q92954 1404 aaPredicted RBP30.45■■■□□ 2.46
PRTN3-202ENST00000544537 GOLGA3Q08378 1498 aa30.44■■■□□ 2.46
PRTN3-202ENST00000544537 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
PRTN3-202ENST00000544537 UGGT2Q9NYU1 1516 aa30.38■■■□□ 2.45
PRTN3-202ENST00000544537 EHMT2Q96KQ7 1210 aa30.34■■■□□ 2.45
PRTN3-202ENST00000544537 CARMIL2Q6F5E8 1435 aa30.3■■■□□ 2.44
PRTN3-202ENST00000544537 DISP1Q96F81 1524 aa30.28■■■□□ 2.44
PRTN3-202ENST00000544537 KIAA0556O60303 1618 aa30.28■■■□□ 2.44
PRTN3-202ENST00000544537 UBTFP17480 764 aaKnown RBP30.27■■■□□ 2.44
PRTN3-202ENST00000544537 CYB5RLQ6IPT4 315 aa30.24■■■□□ 2.43
PRTN3-202ENST00000544537 SAMD9Q5K651 1589 aa30.18■■■□□ 2.42
PRTN3-202ENST00000544537 TNIKQ9UKE5 1360 aa30.16■■■□□ 2.42
PRTN3-202ENST00000544537 PTPRGP23470 1445 aa30.11■■■□□ 2.41
PRTN3-202ENST00000544537 RANGAP1P46060 587 aaPredicted RBP30.1■■■□□ 2.41
PRTN3-202ENST00000544537 EFCAB5A4FU69 1503 aa30.1■■■□□ 2.41
PRTN3-202ENST00000544537 TTBK1Q5TCY1 1321 aaPredicted RBP30.06■■■□□ 2.4
PRTN3-202ENST00000544537 P3H3Q8IVL6 736 aa30.02■■■□□ 2.4
PRTN3-202ENST00000544537 ADCY10Q96PN6 1610 aa29.99■■■□□ 2.39
PRTN3-202ENST00000544537 FHOD3Q2V2M9 1422 aa29.97■■■□□ 2.39
PRTN3-202ENST00000544537 ARHGAP35Q9NRY4 1499 aa29.97■■■□□ 2.39
PRTN3-202ENST00000544537 LOC105371045A0A1W2PR82 267 aa29.96■■■□□ 2.39
PRTN3-202ENST00000544537 UACAQ9BZF9 1416 aa29.94■■■□□ 2.38
PRTN3-202ENST00000544537 ABCC2Q92887 1545 aa29.91■■■□□ 2.38
PRTN3-202ENST00000544537 ABCA8O94911 1581 aa29.9■■■□□ 2.38
PRTN3-202ENST00000544537 UHRF1BP1LA0JNW5 1464 aa29.9■■■□□ 2.38
PRTN3-202ENST00000544537 PLB1Q6P1J6 1458 aa29.89■■■□□ 2.38
PRTN3-202ENST00000544537 CLIP1P30622 1438 aa29.88■■■□□ 2.37
PRTN3-202ENST00000544537 CEP162Q5TB80 1403 aa29.84■■■□□ 2.37
PRTN3-202ENST00000544537 RAPGEF6Q8TEU7 1601 aa29.83■■■□□ 2.37
PRTN3-202ENST00000544537 FMN1Q68DA7 1419 aa29.78■■■□□ 2.36
PRTN3-202ENST00000544537 NPM1P06748 294 aaKnown RBP eCLIP29.77■■■□□ 2.36
PRTN3-202ENST00000544537 KDM5BQ9UGL1 1544 aa29.76■■■□□ 2.35
PRTN3-202ENST00000544537 ZCCHC11Q5TAX3 1644 aaKnown RBP29.75■■■□□ 2.35
PRTN3-202ENST00000544537 MAPKBP1O60336 1514 aa29.72■■■□□ 2.35
PRTN3-202ENST00000544537 NUP153P49790 1475 aaKnown RBP29.68■■■□□ 2.34
PRTN3-202ENST00000544537 HECW1Q76N89 1606 aa29.67■■■□□ 2.34
PRTN3-202ENST00000544537 PCF11O94913 1555 aaKnown RBP29.64■■■□□ 2.34
PRTN3-202ENST00000544537 ATP10BO94823 1461 aa29.61■■■□□ 2.33
PRTN3-202ENST00000544537 ARID3CA6NKF2 412 aa29.6■■■□□ 2.33
PRTN3-202ENST00000544537 ASXL2Q76L83 1435 aa29.6■■■□□ 2.33
PRTN3-202ENST00000544537 CASKIN1Q8WXD9 1431 aa29.58■■■□□ 2.33
PRTN3-202ENST00000544537 FYCO1Q9BQS8 1478 aa29.55■■■□□ 2.32
PRTN3-202ENST00000544537 KIF13AQ9H1H9 1805 aa29.55■■■□□ 2.32
PRTN3-202ENST00000544537 LRRIQ1Q96JM4 1722 aa29.54■■■□□ 2.32
PRTN3-202ENST00000544537 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
PRTN3-202ENST00000544537 DIP2BQ9P265 1576 aa29.53■■■□□ 2.32
PRTN3-202ENST00000544537 TRHP20396 242 aaPredicted RBP29.53■■■□□ 2.32
PRTN3-202ENST00000544537 CDK13Q14004 1512 aaKnown RBP29.53■■■□□ 2.32
PRTN3-202ENST00000544537 EPRSP07814 1512 aaKnown RBP29.52■■■□□ 2.32
PRTN3-202ENST00000544537 ABCC10Q5T3U5 1492 aa29.52■■■□□ 2.32
PRTN3-202ENST00000544537 WDR7Q9Y4E6 1490 aa29.52■■■□□ 2.32
PRTN3-202ENST00000544537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.5■■■□□ 2.31
PRTN3-202ENST00000544537 HNRNPUL2Q1KMD3 747 aaKnown RBP29.5■■■□□ 2.31
PRTN3-202ENST00000544537 VPS8Q8N3P4 1428 aa29.46■■■□□ 2.31
PRTN3-202ENST00000544537 CCDC18Q5T9S5 1454 aa29.45■■■□□ 2.31
PRTN3-202ENST00000544537 GLI2P10070 1586 aa29.41■■■□□ 2.3
PRTN3-202ENST00000544537 FAM69CQ0P6D2 419 aa29.4■■■□□ 2.3
PRTN3-202ENST00000544537 PLEKHD1A6NEE1 506 aa29.36■■■□□ 2.29
PRTN3-202ENST00000544537 KCNH8Q96L42 1107 aa29.33■■■□□ 2.29
PRTN3-202ENST00000544537 MAP3K4Q9Y6R4 1608 aa29.31■■■□□ 2.28
PRTN3-202ENST00000544537 CDK11AQ9UQ88 783 aaPredicted RBP29.31■■■□□ 2.28
PRTN3-202ENST00000544537 CFAP43Q8NDM7 1665 aa29.31■■■□□ 2.28
PRTN3-202ENST00000544537 TSPOAP1O95153 1857 aa29.3■■■□□ 2.28
PRTN3-202ENST00000544537 TROQ12816 1431 aaPredicted RBP29.28■■■□□ 2.28
PRTN3-202ENST00000544537 ABCA9Q8IUA7 1624 aa29.27■■■□□ 2.28
PRTN3-202ENST00000544537 MAGI3Q5TCQ9 1506 aa29.25■■■□□ 2.27
PRTN3-202ENST00000544537 KIF14Q15058 1648 aa29.23■■■□□ 2.27
PRTN3-202ENST00000544537 TIAM1Q13009 1591 aa29.23■■■□□ 2.27
PRTN3-202ENST00000544537 PPRC1Q5VV67 1664 aaKnown RBP29.23■■■□□ 2.27
PRTN3-202ENST00000544537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.2■■■□□ 2.27
PRTN3-202ENST00000544537 TTC37Q6PGP7 1564 aa29.19■■■□□ 2.26
PRTN3-202ENST00000544537 CD109Q6YHK3 1445 aa29.19■■■□□ 2.26
PRTN3-202ENST00000544537 EHBP1L1Q8N3D4 1523 aa29.17■■■□□ 2.26
PRTN3-202ENST00000544537 MAP3K1Q13233 1512 aa29.16■■■□□ 2.26
PRTN3-202ENST00000544537 MTUS2Q5JR59 1369 aa29.15■■■□□ 2.26
PRTN3-202ENST00000544537 TEX14Q8IWB6 1497 aa29.12■■■□□ 2.25
PRTN3-202ENST00000544537 MYO5CQ9NQX4 1742 aa29.11■■■□□ 2.25
PRTN3-202ENST00000544537 APLP2Q06481 763 aa29.07■■■□□ 2.24
PRTN3-202ENST00000544537 LRRC9Q6ZRR7 1453 aa29.06■■■□□ 2.24
PRTN3-202ENST00000544537 SUPT6HQ7KZ85 1726 aaKnown RBP29.04■■■□□ 2.24
PRTN3-202ENST00000544537 PREX2Q70Z35 1606 aa29.01■■■□□ 2.23
PRTN3-202ENST00000544537 CFAP74Q9C0B2 1584 aa29.01■■■□□ 2.23
PRTN3-202ENST00000544537 CDC42BPAQ5VT25 1732 aa29■■■□□ 2.23
PRTN3-202ENST00000544537 PLCH2O75038 1416 aa29■■■□□ 2.23
PRTN3-202ENST00000544537 ARAP3Q8WWN8 1544 aa28.99■■■□□ 2.23
PRTN3-202ENST00000544537 KDM6BO15054 1643 aa28.98■■■□□ 2.23
PRTN3-202ENST00000544537 CDC42BPBQ9Y5S2 1711 aa28.97■■■□□ 2.23
PRTN3-202ENST00000544537 KANK4Q5T7N3 995 aaPredicted RBP28.97■■■□□ 2.23
PRTN3-202ENST00000544537 FANCAO15360 1455 aa28.97■■■□□ 2.23
PRTN3-202ENST00000544537 NEO1Q92859 1461 aa28.97■■■□□ 2.23
PRTN3-202ENST00000544537 NCOA2Q15596 1464 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms