RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 KIAA0586Q9BVV6 1533 aa22.45■■□□□ 1.18
SP140-213ENST00000543928 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
SP140-213ENST00000543928 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
SP140-213ENST00000543928 JPH4Q96JJ6 628 aa22.37■■□□□ 1.17
SP140-213ENST00000543928 CTTNBP2Q8WZ74 1663 aa22.36■■□□□ 1.17
SP140-213ENST00000543928 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
SP140-213ENST00000543928 IQGAP2Q13576 1575 aa22.36■■□□□ 1.17
SP140-213ENST00000543928 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
SP140-213ENST00000543928 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.17
SP140-213ENST00000543928 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.17
SP140-213ENST00000543928 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.17
SP140-213ENST00000543928 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
SP140-213ENST00000543928 UBTFP17480 764 aaKnown RBP22.3■■□□□ 1.16
SP140-213ENST00000543928 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
SP140-213ENST00000543928 UGGT2Q9NYU1 1516 aa22.26■■□□□ 1.15
SP140-213ENST00000543928 ARAP1Q96P48 1450 aa22.21■■□□□ 1.15
SP140-213ENST00000543928 CARMIL2Q6F5E8 1435 aa22.2■■□□□ 1.14
SP140-213ENST00000543928 DISP1Q96F81 1524 aa22.19■■□□□ 1.14
SP140-213ENST00000543928 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
SP140-213ENST00000543928 CYB5RLQ6IPT4 315 aa22.16■■□□□ 1.14
SP140-213ENST00000543928 KIAA0556O60303 1618 aa22.16■■□□□ 1.14
SP140-213ENST00000543928 LOC105371045A0A1W2PR82 267 aa22.14■■□□□ 1.13
SP140-213ENST00000543928 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
SP140-213ENST00000543928 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
SP140-213ENST00000543928 SAMD9Q5K651 1589 aa22.1■■□□□ 1.13
SP140-213ENST00000543928 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
SP140-213ENST00000543928 P3H3Q8IVL6 736 aa22.08■■□□□ 1.13
SP140-213ENST00000543928 PTPRGP23470 1445 aa22.07■■□□□ 1.12
SP140-213ENST00000543928 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
SP140-213ENST00000543928 ARHGAP35Q9NRY4 1499 aa22.01■■□□□ 1.11
SP140-213ENST00000543928 FHOD3Q2V2M9 1422 aa22■■□□□ 1.11
SP140-213ENST00000543928 CLIP1P30622 1438 aa21.97■■□□□ 1.11
SP140-213ENST00000543928 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
SP140-213ENST00000543928 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
SP140-213ENST00000543928 ADCY10Q96PN6 1610 aa21.91■■□□□ 1.1
SP140-213ENST00000543928 PLB1Q6P1J6 1458 aa21.91■■□□□ 1.1
SP140-213ENST00000543928 ABCA8O94911 1581 aa21.89■■□□□ 1.09
SP140-213ENST00000543928 ABCC2Q92887 1545 aa21.89■■□□□ 1.09
SP140-213ENST00000543928 UHRF1BP1LA0JNW5 1464 aa21.89■■□□□ 1.09
SP140-213ENST00000543928 FMN1Q68DA7 1419 aa21.85■■□□□ 1.09
SP140-213ENST00000543928 NPM1P06748 294 aaKnown RBP eCLIP21.83■■□□□ 1.09
SP140-213ENST00000543928 RAPGEF6Q8TEU7 1601 aa21.83■■□□□ 1.08
SP140-213ENST00000543928 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
SP140-213ENST00000543928 KDM5BQ9UGL1 1544 aa21.79■■□□□ 1.08
SP140-213ENST00000543928 NUP153P49790 1475 aaKnown RBP21.77■■□□□ 1.07
SP140-213ENST00000543928 ARID3CA6NKF2 412 aa21.76■■□□□ 1.07
SP140-213ENST00000543928 ZCCHC11Q5TAX3 1644 aaKnown RBP21.75■■□□□ 1.07
SP140-213ENST00000543928 ATP1B4Q9UN42 357 aaPredicted RBP21.74■■□□□ 1.07
SP140-213ENST00000543928 PCF11O94913 1555 aaKnown RBP21.73■■□□□ 1.07
SP140-213ENST00000543928 ATP10BO94823 1461 aa21.72■■□□□ 1.07
SP140-213ENST00000543928 HECW1Q76N89 1606 aa21.72■■□□□ 1.07
SP140-213ENST00000543928 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
SP140-213ENST00000543928 MAPKBP1O60336 1514 aa21.71■■□□□ 1.07
SP140-213ENST00000543928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
SP140-213ENST00000543928 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
SP140-213ENST00000543928 FYCO1Q9BQS8 1478 aa21.67■■□□□ 1.06
SP140-213ENST00000543928 ASXL2Q76L83 1435 aa21.67■■□□□ 1.06
SP140-213ENST00000543928 EPRSP07814 1512 aaKnown RBP21.66■■□□□ 1.06
SP140-213ENST00000543928 VPS8Q8N3P4 1428 aa21.65■■□□□ 1.06
SP140-213ENST00000543928 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
SP140-213ENST00000543928 TRHP20396 242 aaPredicted RBP21.62■■□□□ 1.05
SP140-213ENST00000543928 LRRIQ1Q96JM4 1722 aa21.62■■□□□ 1.05
SP140-213ENST00000543928 WDR7Q9Y4E6 1490 aa21.61■■□□□ 1.05
SP140-213ENST00000543928 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
SP140-213ENST00000543928 ABCC10Q5T3U5 1492 aa21.58■■□□□ 1.05
SP140-213ENST00000543928 PLEKHD1A6NEE1 506 aa21.56■■□□□ 1.04
SP140-213ENST00000543928 DIP2BQ9P265 1576 aa21.56■■□□□ 1.04
SP140-213ENST00000543928 FAM69CQ0P6D2 419 aa21.55■■□□□ 1.04
SP140-213ENST00000543928 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
SP140-213ENST00000543928 CDK11AQ9UQ88 783 aaPredicted RBP21.54■■□□□ 1.04
SP140-213ENST00000543928 KIF13AQ9H1H9 1805 aa21.53■■□□□ 1.04
SP140-213ENST00000543928 GLI2P10070 1586 aa21.49■■□□□ 1.03
SP140-213ENST00000543928 TROQ12816 1431 aaPredicted RBP21.47■■□□□ 1.03
SP140-213ENST00000543928 MAGI3Q5TCQ9 1506 aa21.46■■□□□ 1.03
SP140-213ENST00000543928 CFAP43Q8NDM7 1665 aa21.45■■□□□ 1.02
SP140-213ENST00000543928 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
SP140-213ENST00000543928 APLP2Q06481 763 aa21.42■■□□□ 1.02
SP140-213ENST00000543928 MAP3K1Q13233 1512 aa21.41■■□□□ 1.02
SP140-213ENST00000543928 MTUS2Q5JR59 1369 aa21.41■■□□□ 1.02
SP140-213ENST00000543928 ABCA9Q8IUA7 1624 aa21.4■■□□□ 1.02
SP140-213ENST00000543928 MAP3K4Q9Y6R4 1608 aa21.4■■□□□ 1.02
SP140-213ENST00000543928 KIF14Q15058 1648 aa21.4■■□□□ 1.02
SP140-213ENST00000543928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.39■■□□□ 1.01
SP140-213ENST00000543928 TSPOAP1O95153 1857 aa21.38■■□□□ 1.01
SP140-213ENST00000543928 EHBP1L1Q8N3D4 1523 aa21.38■■□□□ 1.01
SP140-213ENST00000543928 CD109Q6YHK3 1445 aa21.38■■□□□ 1.01
SP140-213ENST00000543928 TTC37Q6PGP7 1564 aa21.36■■□□□ 1.01
SP140-213ENST00000543928 LRRC9Q6ZRR7 1453 aa21.35■■□□□ 1.01
SP140-213ENST00000543928 KANK4Q5T7N3 995 aaPredicted RBP21.35■■□□□ 1.01
SP140-213ENST00000543928 PPRC1Q5VV67 1664 aaKnown RBP21.33■■□□□ 1
SP140-213ENST00000543928 TEX14Q8IWB6 1497 aa21.29■■□□□ 1
SP140-213ENST00000543928 SUPT6HQ7KZ85 1726 aaKnown RBP21.27■■□□□ 1
SP140-213ENST00000543928 PLCH2O75038 1416 aa21.27■■□□□ 1
SP140-213ENST00000543928 MYO5CQ9NQX4 1742 aa21.26■□□□□ 0.99
SP140-213ENST00000543928 NCOA2Q15596 1464 aa21.26■□□□□ 0.99
SP140-213ENST00000543928 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
SP140-213ENST00000543928 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
SP140-213ENST00000543928 ARAP3Q8WWN8 1544 aa21.22■□□□□ 0.99
SP140-213ENST00000543928 GPATCH8Q9UKJ3 1502 aaKnown RBP21.22■□□□□ 0.99
SP140-213ENST00000543928 PREX2Q70Z35 1606 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms