RNA–Protein interactions for RNA: ENST00000543818.5

LRTM2-208, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LRTM2, Length 3,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-208ENST00000543818 TRIM52Q96A61 297 aa17.58■□□□□ 0.4
LRTM2-208ENST00000543818 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
LRTM2-208ENST00000543818 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
LRTM2-208ENST00000543818 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
LRTM2-208ENST00000543818 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
LRTM2-208ENST00000543818 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
LRTM2-208ENST00000543818 MTUS2Q5JR59 1369 aa17.48■□□□□ 0.39
LRTM2-208ENST00000543818 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
LRTM2-208ENST00000543818 FKBP8Q14318 412 aa17.47■□□□□ 0.39
LRTM2-208ENST00000543818 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
LRTM2-208ENST00000543818 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
LRTM2-208ENST00000543818 RRP7BPQ9NSQ0 103 aa17.44■□□□□ 0.38
LRTM2-208ENST00000543818 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
LRTM2-208ENST00000543818 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
LRTM2-208ENST00000543818 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
LRTM2-208ENST00000543818 POLR3GLQ9BT43 218 aa17.42■□□□□ 0.38
LRTM2-208ENST00000543818 AQRO60306 1485 aaKnown RBP eCLIP17.42■□□□□ 0.38
LRTM2-208ENST00000543818 ARAP1Q96P48 1450 aa17.36■□□□□ 0.37
LRTM2-208ENST00000543818 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
LRTM2-208ENST00000543818 TSHZ2Q9NRE2 1034 aa17.36■□□□□ 0.37
LRTM2-208ENST00000543818 KIF21BO75037 1637 aa17.36■□□□□ 0.37
LRTM2-208ENST00000543818 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
LRTM2-208ENST00000543818 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
LRTM2-208ENST00000543818 ZNF326Q5BKZ1 582 aaKnown RBP17.35■□□□□ 0.37
LRTM2-208ENST00000543818 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
LRTM2-208ENST00000543818 TOPBP1Q92547 1522 aa17.34■□□□□ 0.37
LRTM2-208ENST00000543818 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
LRTM2-208ENST00000543818 KCNH8Q96L42 1107 aa17.31■□□□□ 0.36
LRTM2-208ENST00000543818 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
LRTM2-208ENST00000543818 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
LRTM2-208ENST00000543818 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
LRTM2-208ENST00000543818 NBR1Q14596 966 aa17.24■□□□□ 0.35
LRTM2-208ENST00000543818 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
LRTM2-208ENST00000543818 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
LRTM2-208ENST00000543818 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.35
LRTM2-208ENST00000543818 FOXD1Q16676 465 aa17.19■□□□□ 0.34
LRTM2-208ENST00000543818 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
LRTM2-208ENST00000543818 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
LRTM2-208ENST00000543818 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
LRTM2-208ENST00000543818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
LRTM2-208ENST00000543818 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
LRTM2-208ENST00000543818 PLEKHD1A6NEE1 506 aa17.15■□□□□ 0.34
LRTM2-208ENST00000543818 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
LRTM2-208ENST00000543818 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
LRTM2-208ENST00000543818 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
LRTM2-208ENST00000543818 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
LRTM2-208ENST00000543818 BIVM-ERCC5R4GMW8 1640 aa17.13■□□□□ 0.33
LRTM2-208ENST00000543818 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
LRTM2-208ENST00000543818 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
LRTM2-208ENST00000543818 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
LRTM2-208ENST00000543818 TONSLQ96HA7 1378 aa17.1■□□□□ 0.33
LRTM2-208ENST00000543818 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
LRTM2-208ENST00000543818 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
LRTM2-208ENST00000543818 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
LRTM2-208ENST00000543818 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
LRTM2-208ENST00000543818 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
LRTM2-208ENST00000543818 DEKP35659 375 aaKnown RBP17.06■□□□□ 0.32
LRTM2-208ENST00000543818 NPM1P06748 294 aaKnown RBP eCLIP17.05■□□□□ 0.32
LRTM2-208ENST00000543818 KDM2AQ9Y2K7 1162 aa17.04■□□□□ 0.32
LRTM2-208ENST00000543818 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
LRTM2-208ENST00000543818 IRX6P78412 446 aaPredicted RBP17.04■□□□□ 0.32
LRTM2-208ENST00000543818 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
LRTM2-208ENST00000543818 ANP32CO43423 234 aa17.04■□□□□ 0.32
LRTM2-208ENST00000543818 TSPY4P0CV99 314 aa17.04■□□□□ 0.32
LRTM2-208ENST00000543818 TSPY10P0CW01 314 aa17.04■□□□□ 0.32
LRTM2-208ENST00000543818 DHX57Q6P158 1386 aaKnown RBP17.03■□□□□ 0.32
LRTM2-208ENST00000543818 SETD5Q9C0A6 1442 aa17.02■□□□□ 0.31
LRTM2-208ENST00000543818 DAXXQ9UER7 740 aaPredicted RBP17.01■□□□□ 0.31
LRTM2-208ENST00000543818 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
LRTM2-208ENST00000543818 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
LRTM2-208ENST00000543818 ANP32AP39687 249 aaKnown RBP16.97■□□□□ 0.31
LRTM2-208ENST00000543818 SNAPC4Q5SXM2 1469 aa16.96■□□□□ 0.31
LRTM2-208ENST00000543818 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
LRTM2-208ENST00000543818 HNRNPMP52272 730 aaKnown RBP eCLIP16.95■□□□□ 0.3
LRTM2-208ENST00000543818 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
LRTM2-208ENST00000543818 CCDC136Q96JN2 1154 aa16.91■□□□□ 0.3
LRTM2-208ENST00000543818 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
LRTM2-208ENST00000543818 CARMIL2Q6F5E8 1435 aa16.9■□□□□ 0.3
LRTM2-208ENST00000543818 KIF21AQ7Z4S6 1674 aa16.9■□□□□ 0.3
LRTM2-208ENST00000543818 CASKIN1Q8WXD9 1431 aa16.89■□□□□ 0.29
LRTM2-208ENST00000543818 HNRNPUQ00839 825 aaKnown RBP eCLIP16.89■□□□□ 0.29
LRTM2-208ENST00000543818 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.89■□□□□ 0.29
LRTM2-208ENST00000543818 IFT140Q96RY7 1462 aa16.87■□□□□ 0.29
LRTM2-208ENST00000543818 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
LRTM2-208ENST00000543818 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
LRTM2-208ENST00000543818 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
LRTM2-208ENST00000543818 PCF11O94913 1555 aaKnown RBP16.86■□□□□ 0.29
LRTM2-208ENST00000543818 MPHOSPH9Q99550 1183 aa16.86■□□□□ 0.29
LRTM2-208ENST00000543818 CHGAP10645 457 aaKnown RBP16.85■□□□□ 0.29
LRTM2-208ENST00000543818 FGD6Q6ZV73 1430 aa16.85■□□□□ 0.29
LRTM2-208ENST00000543818 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
LRTM2-208ENST00000543818 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
LRTM2-208ENST00000543818 TIAM1Q13009 1591 aa16.84■□□□□ 0.29
LRTM2-208ENST00000543818 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
LRTM2-208ENST00000543818 RRBP1Q9P2E9 1410 aaKnown RBP16.83■□□□□ 0.29
LRTM2-208ENST00000543818 PTPRGP23470 1445 aa16.83■□□□□ 0.28
LRTM2-208ENST00000543818 PRG4Q92954 1404 aaPredicted RBP16.81■□□□□ 0.28
LRTM2-208ENST00000543818 PKD2Q13563 968 aa16.81■□□□□ 0.28
LRTM2-208ENST00000543818 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
LRTM2-208ENST00000543818 PPP1R15AO75807 674 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms