RNA–Protein interactions for RNA: ENST00000543654.1

NPIPB4-218, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-218ENST00000543654 CUX1P39880 1505 aa10.78□□□□□ -0.68
NPIPB4-218ENST00000543654 FBLN2P98095 1184 aa10.76□□□□□ -0.69
NPIPB4-218ENST00000543654 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
NPIPB4-218ENST00000543654 DNMBPQ6XZF7 1577 aa10.76□□□□□ -0.69
NPIPB4-218ENST00000543654 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
NPIPB4-218ENST00000543654 TOPBP1Q92547 1522 aa10.72□□□□□ -0.69
NPIPB4-218ENST00000543654 ERCC6Q03468 1493 aa10.71□□□□□ -0.69
NPIPB4-218ENST00000543654 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.69
NPIPB4-218ENST00000543654 SOGA1O94964 1423 aa10.7□□□□□ -0.7
NPIPB4-218ENST00000543654 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
NPIPB4-218ENST00000543654 FGD5Q6ZNL6 1462 aa10.69□□□□□ -0.7
NPIPB4-218ENST00000543654 FAM9AQ8IZU1 332 aaPredicted RBP10.69□□□□□ -0.7
NPIPB4-218ENST00000543654 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
NPIPB4-218ENST00000543654 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
NPIPB4-218ENST00000543654 SPDYE2BA6NHP3 402 aa10.66□□□□□ -0.7
NPIPB4-218ENST00000543654 SPDYE6P0CI01 402 aa10.66□□□□□ -0.7
NPIPB4-218ENST00000543654 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
NPIPB4-218ENST00000543654 POLA1P09884 1462 aaPredicted RBP10.66□□□□□ -0.7
NPIPB4-218ENST00000543654 ABCA10Q8WWZ4 1543 aa10.64□□□□□ -0.71
NPIPB4-218ENST00000543654 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
NPIPB4-218ENST00000543654 WDR62O43379 1518 aa10.63□□□□□ -0.71
NPIPB4-218ENST00000543654 CUX2O14529 1486 aa10.63□□□□□ -0.71
NPIPB4-218ENST00000543654 GOLGA3Q08378 1498 aa10.62□□□□□ -0.71
NPIPB4-218ENST00000543654 KIF21BO75037 1637 aa10.6□□□□□ -0.71
NPIPB4-218ENST00000543654 RUSC2Q8N2Y8 1516 aa10.59□□□□□ -0.71
NPIPB4-218ENST00000543654 LOC105371045A0A1W2PR82 267 aa10.59□□□□□ -0.71
NPIPB4-218ENST00000543654 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
NPIPB4-218ENST00000543654 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
NPIPB4-218ENST00000543654 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
NPIPB4-218ENST00000543654 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
NPIPB4-218ENST00000543654 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
NPIPB4-218ENST00000543654 WDR97A6NE52 1622 aa10.57□□□□□ -0.72
NPIPB4-218ENST00000543654 THOC2Q8NI27 1593 aaKnown RBP10.56□□□□□ -0.72
NPIPB4-218ENST00000543654 PRXQ9BXM0 1461 aa10.56□□□□□ -0.72
NPIPB4-218ENST00000543654 TNIKQ9UKE5 1360 aa10.56□□□□□ -0.72
NPIPB4-218ENST00000543654 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
NPIPB4-218ENST00000543654 IGF1RP08069 1367 aa10.54□□□□□ -0.72
NPIPB4-218ENST00000543654 UBTFP17480 764 aaKnown RBP10.54□□□□□ -0.72
NPIPB4-218ENST00000543654 TARBP1Q13395 1621 aaKnown RBP10.53□□□□□ -0.72
NPIPB4-218ENST00000543654 GAPVD1Q14C86 1478 aa10.53□□□□□ -0.72
NPIPB4-218ENST00000543654 ABCA5Q8WWZ7 1642 aa10.51□□□□□ -0.73
NPIPB4-218ENST00000543654 CUL7Q14999 1698 aa10.51□□□□□ -0.73
NPIPB4-218ENST00000543654 RAPGEF2Q9Y4G8 1499 aa10.51□□□□□ -0.73
NPIPB4-218ENST00000543654 FXR2P51116 673 aaKnown RBP eCLIP10.51□□□□□ -0.73
NPIPB4-218ENST00000543654 CARMIL1Q5VZK9 1371 aa10.51□□□□□ -0.73
NPIPB4-218ENST00000543654 TDRD9Q8NDG6 1382 aaKnown RBP10.5□□□□□ -0.73
NPIPB4-218ENST00000543654 GRIN2BQ13224 1484 aa10.49□□□□□ -0.73
NPIPB4-218ENST00000543654 CLEC11AQ9Y240 323 aa10.48□□□□□ -0.73
NPIPB4-218ENST00000543654 CEP162Q5TB80 1403 aa10.48□□□□□ -0.73
NPIPB4-218ENST00000543654 SPDYE1Q8NFV5 336 aaPredicted RBP10.45□□□□□ -0.74
NPIPB4-218ENST00000543654 FHAD1B1AJZ9 1412 aa10.44□□□□□ -0.74
NPIPB4-218ENST00000543654 AQRO60306 1485 aaKnown RBP eCLIP10.43□□□□□ -0.74
NPIPB4-218ENST00000543654 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
NPIPB4-218ENST00000543654 CLIP1P30622 1438 aa10.42□□□□□ -0.74
NPIPB4-218ENST00000543654 EIF4G3O43432 1585 aaKnown RBP10.42□□□□□ -0.74
NPIPB4-218ENST00000543654 ZNF608Q9ULD9 1512 aaPredicted RBP10.42□□□□□ -0.74
NPIPB4-218ENST00000543654 ADAMTS12P58397 1594 aa10.4□□□□□ -0.74
NPIPB4-218ENST00000543654 PBRM1Q86U86 1689 aa10.4□□□□□ -0.74
NPIPB4-218ENST00000543654 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
NPIPB4-218ENST00000543654 SYNJ2O15056 1496 aa10.36□□□□□ -0.75
NPIPB4-218ENST00000543654 HAX1O00165 279 aa10.36□□□□□ -0.75
NPIPB4-218ENST00000543654 PRKAR2AP13861 404 aaKnown RBP10.36□□□□□ -0.75
NPIPB4-218ENST00000543654 EFCAB5A4FU69 1503 aa10.34□□□□□ -0.75
NPIPB4-218ENST00000543654 VPS8Q8N3P4 1428 aa10.33□□□□□ -0.76
NPIPB4-218ENST00000543654 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
NPIPB4-218ENST00000543654 GRIN2AQ12879 1464 aa10.33□□□□□ -0.76
NPIPB4-218ENST00000543654 SP7Q8TDD2 431 aaPredicted RBP10.32□□□□□ -0.76
NPIPB4-218ENST00000543654 CTTNBP2Q8WZ74 1663 aa10.31□□□□□ -0.76
NPIPB4-218ENST00000543654 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
NPIPB4-218ENST00000543654 CHADLQ6NUI6 762 aa10.3□□□□□ -0.76
NPIPB4-218ENST00000543654 ARHGAP35Q9NRY4 1499 aa10.3□□□□□ -0.76
NPIPB4-218ENST00000543654 KIAA0586Q9BVV6 1533 aa10.29□□□□□ -0.76
NPIPB4-218ENST00000543654 IQGAP2Q13576 1575 aa10.28□□□□□ -0.76
NPIPB4-218ENST00000543654 RANGAP1P46060 587 aaPredicted RBP10.28□□□□□ -0.76
NPIPB4-218ENST00000543654 EVX2Q03828 476 aa10.28□□□□□ -0.76
NPIPB4-218ENST00000543654 ARAP1Q96P48 1450 aa10.28□□□□□ -0.76
NPIPB4-218ENST00000543654 SPDYE4A6NLX3 237 aa10.27□□□□□ -0.77
NPIPB4-218ENST00000543654 NUP160Q12769 1436 aa10.26□□□□□ -0.77
NPIPB4-218ENST00000543654 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
NPIPB4-218ENST00000543654 UGGT2Q9NYU1 1516 aa10.24□□□□□ -0.77
NPIPB4-218ENST00000543654 SAMD9Q5K651 1589 aa10.23□□□□□ -0.77
NPIPB4-218ENST00000543654 CARMIL2Q6F5E8 1435 aa10.22□□□□□ -0.77
NPIPB4-218ENST00000543654 FHOD3Q2V2M9 1422 aa10.21□□□□□ -0.78
NPIPB4-218ENST00000543654 FYCO1Q9BQS8 1478 aa10.21□□□□□ -0.78
NPIPB4-218ENST00000543654 CEP170Q5SW79 1584 aa10.21□□□□□ -0.78
NPIPB4-218ENST00000543654 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
NPIPB4-218ENST00000543654 MAP3K1Q13233 1512 aa10.19□□□□□ -0.78
NPIPB4-218ENST00000543654 CASKIN1Q8WXD9 1431 aa10.19□□□□□ -0.78
NPIPB4-218ENST00000543654 C19orf67A6NJJ6 358 aa10.17□□□□□ -0.78
NPIPB4-218ENST00000543654 KIAA0556O60303 1618 aa10.17□□□□□ -0.78
NPIPB4-218ENST00000543654 P3H3Q8IVL6 736 aa10.16□□□□□ -0.78
NPIPB4-218ENST00000543654 JPH4Q96JJ6 628 aa10.16□□□□□ -0.78
NPIPB4-218ENST00000543654 DISP1Q96F81 1524 aa10.15□□□□□ -0.78
NPIPB4-218ENST00000543654 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
NPIPB4-218ENST00000543654 CHD1O14646 1710 aa10.14□□□□□ -0.79
NPIPB4-218ENST00000543654 CCDC18Q5T9S5 1454 aa10.14□□□□□ -0.79
NPIPB4-218ENST00000543654 HECW1Q76N89 1606 aa10.12□□□□□ -0.79
NPIPB4-218ENST00000543654 TIAM1Q13009 1591 aa10.12□□□□□ -0.79
NPIPB4-218ENST00000543654 PRG4Q92954 1404 aaPredicted RBP10.11□□□□□ -0.79
NPIPB4-218ENST00000543654 STAG3Q9UJ98 1225 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms