RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 DHX57Q6P158 1386 aaKnown RBP19.89■□□□□ 0.78
PPME1-208ENST00000543525 MAP3K1Q13233 1512 aa19.89■□□□□ 0.77
PPME1-208ENST00000543525 CCNB3Q8WWL7 1395 aa19.87■□□□□ 0.77
PPME1-208ENST00000543525 DNMBPQ6XZF7 1577 aa19.85■□□□□ 0.77
PPME1-208ENST00000543525 TIAM1Q13009 1591 aa19.83■□□□□ 0.77
PPME1-208ENST00000543525 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
PPME1-208ENST00000543525 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
PPME1-208ENST00000543525 ABCA10Q8WWZ4 1543 aa19.8■□□□□ 0.76
PPME1-208ENST00000543525 RIMBP3CA6NJZ7 1639 aa19.79■□□□□ 0.76
PPME1-208ENST00000543525 RIMBP3BA6NNM3 1639 aa19.79■□□□□ 0.76
PPME1-208ENST00000543525 RIMBP3Q9UFD9 1639 aa19.79■□□□□ 0.76
PPME1-208ENST00000543525 TOPBP1Q92547 1522 aa19.78■□□□□ 0.76
PPME1-208ENST00000543525 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
PPME1-208ENST00000543525 LRRC9Q6ZRR7 1453 aa19.75■□□□□ 0.75
PPME1-208ENST00000543525 MIER1Q8N108 512 aa19.74■□□□□ 0.75
PPME1-208ENST00000543525 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
PPME1-208ENST00000543525 GTF3C3Q9Y5Q9 886 aa19.72■□□□□ 0.75
PPME1-208ENST00000543525 CUL7Q14999 1698 aa19.72■□□□□ 0.75
PPME1-208ENST00000543525 CFAP43Q8NDM7 1665 aa19.71■□□□□ 0.75
PPME1-208ENST00000543525 EFCAB5A4FU69 1503 aa19.7■□□□□ 0.74
PPME1-208ENST00000543525 URB2Q14146 1524 aaKnown RBP19.7■□□□□ 0.74
PPME1-208ENST00000543525 PCF11O94913 1555 aaKnown RBP19.68■□□□□ 0.74
PPME1-208ENST00000543525 ITGAEP38570 1179 aa19.68■□□□□ 0.74
PPME1-208ENST00000543525 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
PPME1-208ENST00000543525 FYCO1Q9BQS8 1478 aa19.65■□□□□ 0.74
PPME1-208ENST00000543525 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
PPME1-208ENST00000543525 AQRO60306 1485 aaKnown RBP eCLIP19.64■□□□□ 0.744e-7■■■■□ 22.3
PPME1-208ENST00000543525 CTTNBP2Q8WZ74 1663 aa19.64■□□□□ 0.73
PPME1-208ENST00000543525 PHLDB1Q86UU1 1377 aa19.63■□□□□ 0.73
PPME1-208ENST00000543525 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
PPME1-208ENST00000543525 P3H3Q8IVL6 736 aa19.63■□□□□ 0.73
PPME1-208ENST00000543525 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
PPME1-208ENST00000543525 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
PPME1-208ENST00000543525 FHOD3Q2V2M9 1422 aa19.62■□□□□ 0.73
PPME1-208ENST00000543525 WDR97A6NE52 1622 aa19.61■□□□□ 0.73
PPME1-208ENST00000543525 ATP1B4Q9UN42 357 aaPredicted RBP19.59■□□□□ 0.73
PPME1-208ENST00000543525 CYB5RLQ6IPT4 315 aa19.58■□□□□ 0.72
PPME1-208ENST00000543525 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
PPME1-208ENST00000543525 FMN1Q68DA7 1419 aa19.57■□□□□ 0.72
PPME1-208ENST00000543525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.55■□□□□ 0.723e-6■□□□□ 10.4
PPME1-208ENST00000543525 MAPKBP1O60336 1514 aa19.55■□□□□ 0.72
PPME1-208ENST00000543525 TRHP20396 242 aaPredicted RBP19.55■□□□□ 0.72
PPME1-208ENST00000543525 ZNF608Q9ULD9 1512 aaPredicted RBP19.54■□□□□ 0.72
PPME1-208ENST00000543525 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
PPME1-208ENST00000543525 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
PPME1-208ENST00000543525 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
PPME1-208ENST00000543525 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
PPME1-208ENST00000543525 SAMD9Q5K651 1589 aa19.48■□□□□ 0.71
PPME1-208ENST00000543525 SNAPC4Q5SXM2 1469 aa19.47■□□□□ 0.71
PPME1-208ENST00000543525 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
PPME1-208ENST00000543525 FGD6Q6ZV73 1430 aa19.43■□□□□ 0.7
PPME1-208ENST00000543525 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
PPME1-208ENST00000543525 GRIN2BQ13224 1484 aa19.39■□□□□ 0.69
PPME1-208ENST00000543525 TARBP1Q13395 1621 aaKnown RBP19.37■□□□□ 0.69
PPME1-208ENST00000543525 EIF4G3O43432 1585 aaKnown RBP19.37■□□□□ 0.69
PPME1-208ENST00000543525 SIN3AQ96ST3 1273 aa19.35■□□□□ 0.69
PPME1-208ENST00000543525 EHBP1L1Q8N3D4 1523 aa19.34■□□□□ 0.69
PPME1-208ENST00000543525 LRRIQ1Q96JM4 1722 aa19.33■□□□□ 0.69
PPME1-208ENST00000543525 NCOA2Q15596 1464 aa19.33■□□□□ 0.68
PPME1-208ENST00000543525 SUPT6HQ7KZ85 1726 aaKnown RBP19.33■□□□□ 0.68
PPME1-208ENST00000543525 MYOM3Q5VTT5 1437 aa19.33■□□□□ 0.68
PPME1-208ENST00000543525 CHD1O14646 1710 aa19.31■□□□□ 0.68
PPME1-208ENST00000543525 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
PPME1-208ENST00000543525 HFM1A2PYH4 1435 aa19.3■□□□□ 0.68
PPME1-208ENST00000543525 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
PPME1-208ENST00000543525 FBLN2P98095 1184 aa19.27■□□□□ 0.68
PPME1-208ENST00000543525 PTPN23Q9H3S7 1636 aa19.27■□□□□ 0.68
PPME1-208ENST00000543525 PPP1R15AO75807 674 aaPredicted RBP19.26■□□□□ 0.67
PPME1-208ENST00000543525 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
PPME1-208ENST00000543525 HECW1Q76N89 1606 aa19.25■□□□□ 0.67
PPME1-208ENST00000543525 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
PPME1-208ENST00000543525 PTPRKQ15262 1439 aa19.25■□□□□ 0.67
PPME1-208ENST00000543525 IQGAP2Q13576 1575 aa19.24■□□□□ 0.67
PPME1-208ENST00000543525 ADAMTS12P58397 1594 aa19.24■□□□□ 0.67
PPME1-208ENST00000543525 NAIPQ13075 1403 aa19.22■□□□□ 0.67
PPME1-208ENST00000543525 TONSLQ96HA7 1378 aa19.21■□□□□ 0.66
PPME1-208ENST00000543525 TCOF1Q13428 1488 aaKnown RBP19.19■□□□□ 0.66
PPME1-208ENST00000543525 MAGI3Q5TCQ9 1506 aa19.19■□□□□ 0.66
PPME1-208ENST00000543525 DDX10Q13206 875 aaKnown RBP19.17■□□□□ 0.66
PPME1-208ENST00000543525 EPRSP07814 1512 aaKnown RBP19.17■□□□□ 0.66
PPME1-208ENST00000543525 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
PPME1-208ENST00000543525 AKNAQ7Z591 1439 aa19.12■□□□□ 0.65
PPME1-208ENST00000543525 MIA2Q96PC5 1412 aa19.12■□□□□ 0.65
PPME1-208ENST00000543525 GCC2Q8IWJ2 1684 aa19.11■□□□□ 0.65
PPME1-208ENST00000543525 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.65
PPME1-208ENST00000543525 KIAA0586Q9BVV6 1533 aa19.07■□□□□ 0.64
PPME1-208ENST00000543525 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
PPME1-208ENST00000543525 KCNH8Q96L42 1107 aa19.06■□□□□ 0.64
PPME1-208ENST00000543525 RRP7BPQ9NSQ0 103 aa19.06■□□□□ 0.64
PPME1-208ENST00000543525 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
PPME1-208ENST00000543525 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
PPME1-208ENST00000543525 ANP32CO43423 234 aa19.05■□□□□ 0.64
PPME1-208ENST00000543525 CHIC2Q9UKJ5 165 aa19.04■□□□□ 0.64
PPME1-208ENST00000543525 HIRIP3Q9BW71 556 aaPredicted RBP19.04■□□□□ 0.64
PPME1-208ENST00000543525 KIAA0556O60303 1618 aa19.03■□□□□ 0.64
PPME1-208ENST00000543525 TRIM52Q96A61 297 aa19.02■□□□□ 0.63
PPME1-208ENST00000543525 MAGI1Q96QZ7 1491 aaPredicted RBP19.01■□□□□ 0.63
PPME1-208ENST00000543525 DISP1Q96F81 1524 aa19■□□□□ 0.63
PPME1-208ENST00000543525 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
PPME1-208ENST00000543525 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms