RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 HIRIP3Q9BW71 556 aaPredicted RBP24.52■■□□□ 1.52
TPBG-203ENST00000543496 NEFLP07196 543 aa24.48■■□□□ 1.51
TPBG-203ENST00000543496 FAM50AQ14320 339 aaKnown RBP24.48■■□□□ 1.51
TPBG-203ENST00000543496 TRIM52Q96A61 297 aa24.48■■□□□ 1.51
TPBG-203ENST00000543496 PPP1R15AO75807 674 aaPredicted RBP24.45■■□□□ 1.51
TPBG-203ENST00000543496 TIAM1Q13009 1591 aa24.45■■□□□ 1.5
TPBG-203ENST00000543496 RBM19Q9Y4C8 960 aaKnown RBP24.42■■□□□ 1.5
TPBG-203ENST00000543496 PHLDB1Q86UU1 1377 aa24.41■■□□□ 1.5
TPBG-203ENST00000543496 ANP32CO43423 234 aa24.38■■□□□ 1.49
TPBG-203ENST00000543496 LRRC9Q6ZRR7 1453 aa24.37■■□□□ 1.49
TPBG-203ENST00000543496 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
TPBG-203ENST00000543496 MAP3K1Q13233 1512 aa24.33■■□□□ 1.49
TPBG-203ENST00000543496 CCER2I3L3R5 266 aa24.33■■□□□ 1.49
TPBG-203ENST00000543496 IGF1RP08069 1367 aa24.32■■□□□ 1.48
TPBG-203ENST00000543496 P3H3Q8IVL6 736 aa24.31■■□□□ 1.48
TPBG-203ENST00000543496 TIMELESSQ9UNS1 1208 aa24.28■■□□□ 1.48
TPBG-203ENST00000543496 CFTRP13569 1480 aa24.27■■□□□ 1.48
TPBG-203ENST00000543496 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
TPBG-203ENST00000543496 NCAPD3P42695 1498 aa24.25■■□□□ 1.47
TPBG-203ENST00000543496 CARMIL1Q5VZK9 1371 aa24.25■■□□□ 1.47
TPBG-203ENST00000543496 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
TPBG-203ENST00000543496 PCF11O94913 1555 aaKnown RBP24.19■■□□□ 1.46
TPBG-203ENST00000543496 TONSLQ96HA7 1378 aa24.18■■□□□ 1.46
TPBG-203ENST00000543496 CFAP43Q8NDM7 1665 aa24.17■■□□□ 1.46
TPBG-203ENST00000543496 MSH5O43196 834 aa24.14■■□□□ 1.46
TPBG-203ENST00000543496 IRX6P78412 446 aaPredicted RBP24.14■■□□□ 1.45
TPBG-203ENST00000543496 HNRNPUQ00839 825 aaKnown RBP eCLIP24.11■■□□□ 1.45
TPBG-203ENST00000543496 FHOD3Q2V2M9 1422 aa24.11■■□□□ 1.45
TPBG-203ENST00000543496 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.45
TPBG-203ENST00000543496 CCDC18Q5T9S5 1454 aa24.04■■□□□ 1.44
TPBG-203ENST00000543496 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
TPBG-203ENST00000543496 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
TPBG-203ENST00000543496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.43
TPBG-203ENST00000543496 FYCO1Q9BQS8 1478 aa23.99■■□□□ 1.43
TPBG-203ENST00000543496 FGD6Q6ZV73 1430 aa23.99■■□□□ 1.43
TPBG-203ENST00000543496 CASKIN1Q8WXD9 1431 aa23.96■■□□□ 1.43
TPBG-203ENST00000543496 ERICH6Q7L0X2 663 aa23.96■■□□□ 1.43
TPBG-203ENST00000543496 UACAQ9BZF9 1416 aa23.96■■□□□ 1.43
TPBG-203ENST00000543496 FANCIQ9NVI1 1328 aa23.96■■□□□ 1.43
TPBG-203ENST00000543496 PTPRKQ15262 1439 aa23.95■■□□□ 1.42
TPBG-203ENST00000543496 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
TPBG-203ENST00000543496 HFM1A2PYH4 1435 aa23.92■■□□□ 1.42
TPBG-203ENST00000543496 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
TPBG-203ENST00000543496 MTUS2Q5JR59 1369 aa23.9■■□□□ 1.42
TPBG-203ENST00000543496 WASHC2AQ641Q2 1341 aa23.89■■□□□ 1.41
TPBG-203ENST00000543496 HSPA5P11021 654 aaKnown RBP23.88■■□□□ 1.41
TPBG-203ENST00000543496 AQRO60306 1485 aaKnown RBP eCLIP23.87■■□□□ 1.41
TPBG-203ENST00000543496 EFCAB5A4FU69 1503 aa23.87■■□□□ 1.41
TPBG-203ENST00000543496 NAIPQ13075 1403 aa23.86■■□□□ 1.41
TPBG-203ENST00000543496 CCDC184Q52MB2 194 aa23.85■■□□□ 1.41
TPBG-203ENST00000543496 KDM5BQ9UGL1 1544 aa23.85■■□□□ 1.41
TPBG-203ENST00000543496 RAD54L2Q9Y4B4 1467 aa23.83■■□□□ 1.41
TPBG-203ENST00000543496 PPP4R2Q9NY27 417 aa23.82■■□□□ 1.4
TPBG-203ENST00000543496 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
TPBG-203ENST00000543496 RRP7BPQ9NSQ0 103 aa23.79■■□□□ 1.4
TPBG-203ENST00000543496 FAM9BQ8IZU0 186 aa23.79■■□□□ 1.4
TPBG-203ENST00000543496 SNAPC4Q5SXM2 1469 aa23.78■■□□□ 1.4
TPBG-203ENST00000543496 B4GALNT3Q6L9W6 998 aa23.77■■□□□ 1.4
TPBG-203ENST00000543496 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
TPBG-203ENST00000543496 EIF4G2P78344 907 aaKnown RBP eCLIP23.77■■□□□ 1.4
TPBG-203ENST00000543496 NCOA2Q15596 1464 aa23.76■■□□□ 1.39
TPBG-203ENST00000543496 CTTNBP2Q8WZ74 1663 aa23.76■■□□□ 1.39
TPBG-203ENST00000543496 ERICH6BQ5W0A0 696 aa23.76■■□□□ 1.39
TPBG-203ENST00000543496 MYOM3Q5VTT5 1437 aa23.76■■□□□ 1.39
TPBG-203ENST00000543496 ANO8Q9HCE9 1232 aaPredicted RBP23.74■■□□□ 1.39
TPBG-203ENST00000543496 FANCD2Q9BXW9 1451 aa23.73■■□□□ 1.39
TPBG-203ENST00000543496 CNTLNQ9NXG0 1405 aa23.72■■□□□ 1.39
TPBG-203ENST00000543496 MRS2Q9HD23 443 aa23.71■■□□□ 1.39
TPBG-203ENST00000543496 LRRIQ1Q96JM4 1722 aa23.71■■□□□ 1.39
TPBG-203ENST00000543496 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.39
TPBG-203ENST00000543496 C11orf95C9JLR9 678 aaPredicted RBP23.7■■□□□ 1.38
TPBG-203ENST00000543496 PRKRIP1Q9H875 184 aaPredicted RBP23.69■■□□□ 1.38
TPBG-203ENST00000543496 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
TPBG-203ENST00000543496 CC2D2AQ9P2K1 1620 aa23.68■■□□□ 1.38
TPBG-203ENST00000543496 CUL7Q14999 1698 aa23.67■■□□□ 1.38
TPBG-203ENST00000543496 SUPT6HQ7KZ85 1726 aaKnown RBP23.66■■□□□ 1.38
TPBG-203ENST00000543496 FOXD1Q16676 465 aa23.65■■□□□ 1.38
TPBG-203ENST00000543496 L3MBTL2Q969R5 705 aa23.65■■□□□ 1.38
TPBG-203ENST00000543496 DENND4BO75064 1496 aaPredicted RBP23.65■■□□□ 1.38
TPBG-203ENST00000543496 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.38
TPBG-203ENST00000543496 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
TPBG-203ENST00000543496 CCDC7Q96M83 1385 aa23.63■■□□□ 1.37
TPBG-203ENST00000543496 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
TPBG-203ENST00000543496 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
TPBG-203ENST00000543496 MPHOSPH9Q99550 1183 aa23.6■■□□□ 1.37
TPBG-203ENST00000543496 EHBP1L1Q8N3D4 1523 aa23.6■■□□□ 1.37
TPBG-203ENST00000543496 KDM6BO15054 1643 aa23.59■■□□□ 1.37
TPBG-203ENST00000543496 NCOA1Q15788 1441 aa23.59■■□□□ 1.37
TPBG-203ENST00000543496 HECW1Q76N89 1606 aa23.59■■□□□ 1.37
TPBG-203ENST00000543496 DEKP35659 375 aaKnown RBP23.58■■□□□ 1.37
TPBG-203ENST00000543496 UGGT2Q9NYU1 1516 aa23.57■■□□□ 1.36
TPBG-203ENST00000543496 SAMD9Q5K651 1589 aa23.57■■□□□ 1.36
TPBG-203ENST00000543496 CNGB1Q14028 1251 aaPredicted RBP23.57■■□□□ 1.36
TPBG-203ENST00000543496 GCC2Q8IWJ2 1684 aa23.55■■□□□ 1.36
TPBG-203ENST00000543496 MAGI3Q5TCQ9 1506 aa23.55■■□□□ 1.36
TPBG-203ENST00000543496 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
TPBG-203ENST00000543496 NBPF8Q3BBV2 869 aa23.54■■□□□ 1.36
TPBG-203ENST00000543496 NBR1Q14596 966 aa23.53■■□□□ 1.36
TPBG-203ENST00000543496 NOP58Q9Y2X3 529 aaKnown RBP23.53■■□□□ 1.36
TPBG-203ENST00000543496 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms