RNA–Protein interactions for RNA: ENST00000542898.5

MEFV-210, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

TSL 5

Gene MEFV, Length 3,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-210ENST00000542898 DEKP35659 375 aaKnown RBP18.69■□□□□ 0.58
MEFV-210ENST00000542898 URB2Q14146 1524 aaKnown RBP18.68■□□□□ 0.58
MEFV-210ENST00000542898 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
MEFV-210ENST00000542898 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
MEFV-210ENST00000542898 EIF5BO60841 1220 aaKnown RBP18.67■□□□□ 0.58
MEFV-210ENST00000542898 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.57
MEFV-210ENST00000542898 FAM50AQ14320 339 aaKnown RBP18.64■□□□□ 0.57
MEFV-210ENST00000542898 CUX1P39880 1505 aa18.62■□□□□ 0.57
MEFV-210ENST00000542898 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.61■□□□□ 0.57
MEFV-210ENST00000542898 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
MEFV-210ENST00000542898 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
MEFV-210ENST00000542898 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.57
MEFV-210ENST00000542898 WDR62O43379 1518 aa18.57■□□□□ 0.56
MEFV-210ENST00000542898 SOGA1O94964 1423 aa18.56■□□□□ 0.56
MEFV-210ENST00000542898 TOPBP1Q92547 1522 aa18.56■□□□□ 0.56
MEFV-210ENST00000542898 MSH5O43196 834 aa18.55■□□□□ 0.56
MEFV-210ENST00000542898 SIN3AQ96ST3 1273 aa18.54■□□□□ 0.56
MEFV-210ENST00000542898 B4GALNT3Q6L9W6 998 aa18.53■□□□□ 0.56
MEFV-210ENST00000542898 FAM9BQ8IZU0 186 aa18.52■□□□□ 0.55
MEFV-210ENST00000542898 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
MEFV-210ENST00000542898 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
MEFV-210ENST00000542898 CUX2O14529 1486 aa18.48■□□□□ 0.55
MEFV-210ENST00000542898 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
MEFV-210ENST00000542898 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
MEFV-210ENST00000542898 POLA1P09884 1462 aaPredicted RBP18.45■□□□□ 0.54
MEFV-210ENST00000542898 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
MEFV-210ENST00000542898 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
MEFV-210ENST00000542898 P3H3Q8IVL6 736 aa18.44■□□□□ 0.54
MEFV-210ENST00000542898 CLIP1P30622 1438 aa18.41■□□□□ 0.54
MEFV-210ENST00000542898 TNIKQ9UKE5 1360 aa18.41■□□□□ 0.54
MEFV-210ENST00000542898 ANP32AP39687 249 aaKnown RBP18.4■□□□□ 0.54
MEFV-210ENST00000542898 ARID3CA6NKF2 412 aa18.39■□□□□ 0.53
MEFV-210ENST00000542898 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
MEFV-210ENST00000542898 LAS1LQ9Y4W2 734 aaKnown RBP18.38■□□□□ 0.53
MEFV-210ENST00000542898 FBLN2P98095 1184 aa18.37■□□□□ 0.53
MEFV-210ENST00000542898 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
MEFV-210ENST00000542898 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
MEFV-210ENST00000542898 KANK4Q5T7N3 995 aaPredicted RBP18.35■□□□□ 0.53
MEFV-210ENST00000542898 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
MEFV-210ENST00000542898 RUSC2Q8N2Y8 1516 aa18.35■□□□□ 0.53
MEFV-210ENST00000542898 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
MEFV-210ENST00000542898 WDR97A6NE52 1622 aa18.32■□□□□ 0.52
MEFV-210ENST00000542898 DHX57Q6P158 1386 aaKnown RBP18.28■□□□□ 0.52
MEFV-210ENST00000542898 DAXXQ9UER7 740 aaPredicted RBP18.28■□□□□ 0.52
MEFV-210ENST00000542898 IL27Q8NEV9 243 aa18.27■□□□□ 0.52
MEFV-210ENST00000542898 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
MEFV-210ENST00000542898 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.51
MEFV-210ENST00000542898 PAK3O75914 559 aaPredicted RBP18.25■□□□□ 0.51
MEFV-210ENST00000542898 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
MEFV-210ENST00000542898 ARXQ96QS3 562 aa18.24■□□□□ 0.51
MEFV-210ENST00000542898 EIF4G3O43432 1585 aaKnown RBP18.22■□□□□ 0.51
MEFV-210ENST00000542898 ABCA10Q8WWZ4 1543 aa18.22■□□□□ 0.51
MEFV-210ENST00000542898 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
MEFV-210ENST00000542898 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
MEFV-210ENST00000542898 GOLGA3Q08378 1498 aa18.21■□□□□ 0.51
MEFV-210ENST00000542898 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
MEFV-210ENST00000542898 ZNF326Q5BKZ1 582 aaKnown RBP18.19■□□□□ 0.5
MEFV-210ENST00000542898 ABCA5Q8WWZ7 1642 aa18.19■□□□□ 0.5
MEFV-210ENST00000542898 NEFMP07197 916 aa18.18■□□□□ 0.5
MEFV-210ENST00000542898 TONSLQ96HA7 1378 aa18.16■□□□□ 0.5
MEFV-210ENST00000542898 FANCIQ9NVI1 1328 aa18.15■□□□□ 0.5
MEFV-210ENST00000542898 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
MEFV-210ENST00000542898 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
MEFV-210ENST00000542898 VPS8Q8N3P4 1428 aa18.06■□□□□ 0.48
MEFV-210ENST00000542898 IGF1RP08069 1367 aa18.04■□□□□ 0.48
MEFV-210ENST00000542898 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
MEFV-210ENST00000542898 CCER2I3L3R5 266 aa18.03■□□□□ 0.48
MEFV-210ENST00000542898 SNAPC4Q5SXM2 1469 aa18.03■□□□□ 0.48
MEFV-210ENST00000542898 CHIC2Q9UKJ5 165 aa18.03■□□□□ 0.48
MEFV-210ENST00000542898 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
MEFV-210ENST00000542898 GRIN2BQ13224 1484 aa18■□□□□ 0.47
MEFV-210ENST00000542898 TIMELESSQ9UNS1 1208 aa18■□□□□ 0.47
MEFV-210ENST00000542898 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
MEFV-210ENST00000542898 PPP1R15AO75807 674 aaPredicted RBP17.98■□□□□ 0.47
MEFV-210ENST00000542898 ERICH3Q5RHP9 1530 aa17.97■□□□□ 0.47
MEFV-210ENST00000542898 IPO9Q96P70 1041 aaKnown RBP17.96■□□□□ 0.47
MEFV-210ENST00000542898 CHD1O14646 1710 aa17.96■□□□□ 0.47
MEFV-210ENST00000542898 SLC4A3P48751 1232 aa17.96■□□□□ 0.47
MEFV-210ENST00000542898 CCDC184Q52MB2 194 aa17.96■□□□□ 0.47
MEFV-210ENST00000542898 ADAMTS12P58397 1594 aa17.96■□□□□ 0.46
MEFV-210ENST00000542898 BRPF3Q9ULD4 1205 aa17.93■□□□□ 0.46
MEFV-210ENST00000542898 EEA1Q15075 1411 aa17.92■□□□□ 0.46
MEFV-210ENST00000542898 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
MEFV-210ENST00000542898 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.46
MEFV-210ENST00000542898 RRP7BPQ9NSQ0 103 aa17.89■□□□□ 0.45
MEFV-210ENST00000542898 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
MEFV-210ENST00000542898 ARID4BQ4LE39 1312 aaPredicted RBP17.87■□□□□ 0.45
MEFV-210ENST00000542898 CARMIL1Q5VZK9 1371 aa17.87■□□□□ 0.45
MEFV-210ENST00000542898 SYNJ2O15056 1496 aa17.87■□□□□ 0.45
MEFV-210ENST00000542898 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
MEFV-210ENST00000542898 EIF4G2P78344 907 aaKnown RBP eCLIP17.86■□□□□ 0.45
MEFV-210ENST00000542898 FHAD1B1AJZ9 1412 aa17.85■□□□□ 0.45
MEFV-210ENST00000542898 CUL7Q14999 1698 aa17.85■□□□□ 0.45
MEFV-210ENST00000542898 TMC1Q8TDI8 760 aa17.85■□□□□ 0.45
MEFV-210ENST00000542898 FOXD1Q16676 465 aa17.84■□□□□ 0.45
MEFV-210ENST00000542898 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
MEFV-210ENST00000542898 GRIN2AQ12879 1464 aa17.84■□□□□ 0.45
MEFV-210ENST00000542898 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
MEFV-210ENST00000542898 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
MEFV-210ENST00000542898 SKAP1Q86WV1 359 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms