RNA–Protein interactions for RNA: ENST00000542688.5

ACSF3-213, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 5

Gene ACSF3, Length 2,024 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-213ENST00000542688 ERICH6BQ5W0A0 696 aa23.96■■□□□ 1.43
ACSF3-213ENST00000542688 PRKCSHP14314 528 aaPredicted RBP23.95■■□□□ 1.42
ACSF3-213ENST00000542688 RAB3GAP2Q9H2M9 1393 aa23.95■■□□□ 1.42
ACSF3-213ENST00000542688 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.42
ACSF3-213ENST00000542688 WDR97A6NE52 1622 aa23.94■■□□□ 1.42
ACSF3-213ENST00000542688 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
ACSF3-213ENST00000542688 KANK4Q5T7N3 995 aaPredicted RBP23.94■■□□□ 1.42
ACSF3-213ENST00000542688 PRXQ9BXM0 1461 aa23.93■■□□□ 1.42
ACSF3-213ENST00000542688 SETD5Q9C0A6 1442 aa23.88■■□□□ 1.41
ACSF3-213ENST00000542688 BIVM-ERCC5R4GMW8 1640 aa23.87■■□□□ 1.41
ACSF3-213ENST00000542688 TRIM52Q96A61 297 aa23.87■■□□□ 1.41
ACSF3-213ENST00000542688 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
ACSF3-213ENST00000542688 MAP3K1Q13233 1512 aa23.84■■□□□ 1.41
ACSF3-213ENST00000542688 DEKP35659 375 aaKnown RBP23.81■■□□□ 1.4
ACSF3-213ENST00000542688 PPP4R2Q9NY27 417 aa23.73■■□□□ 1.39
ACSF3-213ENST00000542688 TIAM1Q13009 1591 aa23.72■■□□□ 1.39
ACSF3-213ENST00000542688 ARHGAP35Q9NRY4 1499 aa23.69■■□□□ 1.38
ACSF3-213ENST00000542688 HNRNPUQ00839 825 aaKnown RBP eCLIP23.63■■□□□ 1.37
ACSF3-213ENST00000542688 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
ACSF3-213ENST00000542688 NOP58Q9Y2X3 529 aaKnown RBP23.63■■□□□ 1.37
ACSF3-213ENST00000542688 KIF27Q86VH2 1401 aa23.62■■□□□ 1.37
ACSF3-213ENST00000542688 LRRC9Q6ZRR7 1453 aa23.58■■□□□ 1.37
ACSF3-213ENST00000542688 TONSLQ96HA7 1378 aa23.55■■□□□ 1.36
ACSF3-213ENST00000542688 CFAP43Q8NDM7 1665 aa23.55■■□□□ 1.36
ACSF3-213ENST00000542688 FHAD1B1AJZ9 1412 aa23.53■■□□□ 1.36
ACSF3-213ENST00000542688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
ACSF3-213ENST00000542688 IRX6P78412 446 aaPredicted RBP23.52■■□□□ 1.36
ACSF3-213ENST00000542688 CFTRP13569 1480 aa23.5■■□□□ 1.35
ACSF3-213ENST00000542688 RTL5Q5HYW3 569 aaPredicted RBP23.49■■□□□ 1.35
ACSF3-213ENST00000542688 PRDM2Q13029 1718 aa23.48■■□□□ 1.35
ACSF3-213ENST00000542688 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
ACSF3-213ENST00000542688 HIRIP3Q9BW71 556 aaPredicted RBP23.47■■□□□ 1.35
ACSF3-213ENST00000542688 FAM50AQ14320 339 aaKnown RBP23.43■■□□□ 1.34
ACSF3-213ENST00000542688 ANP32AP39687 249 aaKnown RBP23.42■■□□□ 1.34
ACSF3-213ENST00000542688 NBR1Q14596 966 aa23.4■■□□□ 1.34
ACSF3-213ENST00000542688 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.34
ACSF3-213ENST00000542688 CUX1P39880 1505 aa23.39■■□□□ 1.34
ACSF3-213ENST00000542688 ZBED9Q6R2W3 1325 aa23.38■■□□□ 1.33
ACSF3-213ENST00000542688 NCOA2Q15596 1464 aa23.37■■□□□ 1.33
ACSF3-213ENST00000542688 IPO9Q96P70 1041 aaKnown RBP23.36■■□□□ 1.33
ACSF3-213ENST00000542688 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
ACSF3-213ENST00000542688 B4GALNT3Q6L9W6 998 aa23.35■■□□□ 1.33
ACSF3-213ENST00000542688 CCDC18Q5T9S5 1454 aa23.34■■□□□ 1.33
ACSF3-213ENST00000542688 CNTLNQ9NXG0 1405 aa23.33■■□□□ 1.33
ACSF3-213ENST00000542688 ANO8Q9HCE9 1232 aaPredicted RBP23.33■■□□□ 1.32
ACSF3-213ENST00000542688 PAK3O75914 559 aaPredicted RBP23.31■■□□□ 1.32
ACSF3-213ENST00000542688 ZBTB47Q9UFB7 747 aaPredicted RBP23.3■■□□□ 1.32
ACSF3-213ENST00000542688 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
ACSF3-213ENST00000542688 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
ACSF3-213ENST00000542688 HFM1A2PYH4 1435 aa23.27■■□□□ 1.32
ACSF3-213ENST00000542688 LAMC3Q9Y6N6 1575 aa23.26■■□□□ 1.31
ACSF3-213ENST00000542688 KDM5BQ9UGL1 1544 aa23.26■■□□□ 1.31
ACSF3-213ENST00000542688 FYCO1Q9BQS8 1478 aa23.26■■□□□ 1.31
ACSF3-213ENST00000542688 PTPN23Q9H3S7 1636 aa23.25■■□□□ 1.31
ACSF3-213ENST00000542688 WASHC2AQ641Q2 1341 aa23.24■■□□□ 1.31
ACSF3-213ENST00000542688 USP35Q9P2H5 1018 aa23.21■■□□□ 1.31
ACSF3-213ENST00000542688 SMG6Q86US8 1419 aaKnown RBP23.21■■□□□ 1.31
ACSF3-213ENST00000542688 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.312e-6■■■■□ 26.1
ACSF3-213ENST00000542688 SALL2Q9Y467 1007 aaPredicted RBP23.2■■□□□ 1.3
ACSF3-213ENST00000542688 FGD6Q6ZV73 1430 aa23.19■■□□□ 1.3
ACSF3-213ENST00000542688 HSPA5P11021 654 aaKnown RBP23.17■■□□□ 1.3
ACSF3-213ENST00000542688 EIF4G2P78344 907 aaKnown RBP eCLIP23.17■■□□□ 1.3
ACSF3-213ENST00000542688 NESP48681 1621 aa23.16■■□□□ 1.3
ACSF3-213ENST00000542688 EFCAB5A4FU69 1503 aa23.16■■□□□ 1.3
ACSF3-213ENST00000542688 PRKRIP1Q9H875 184 aaPredicted RBP23.16■■□□□ 1.3
ACSF3-213ENST00000542688 MRS2Q9HD23 443 aa23.16■■□□□ 1.3
ACSF3-213ENST00000542688 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
ACSF3-213ENST00000542688 IGF1RP08069 1367 aa23.14■■□□□ 1.3
ACSF3-213ENST00000542688 CASKIN1Q8WXD9 1431 aa23.14■■□□□ 1.3
ACSF3-213ENST00000542688 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
ACSF3-213ENST00000542688 RNF123Q5XPI4 1314 aa23.13■■□□□ 1.29
ACSF3-213ENST00000542688 FMN1Q68DA7 1419 aa23.13■■□□□ 1.29
ACSF3-213ENST00000542688 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
ACSF3-213ENST00000542688 NCOA1Q15788 1441 aa23.12■■□□□ 1.29
ACSF3-213ENST00000542688 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
ACSF3-213ENST00000542688 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
ACSF3-213ENST00000542688 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
ACSF3-213ENST00000542688 POLR1AO95602 1720 aaPredicted RBP23.11■■□□□ 1.29
ACSF3-213ENST00000542688 C11orf95C9JLR9 678 aaPredicted RBP23.1■■□□□ 1.29
ACSF3-213ENST00000542688 CCDC7Q96M83 1385 aa23.1■■□□□ 1.29
ACSF3-213ENST00000542688 HECW1Q76N89 1606 aa23.1■■□□□ 1.29
ACSF3-213ENST00000542688 NAIPQ13075 1403 aa23.08■■□□□ 1.29
ACSF3-213ENST00000542688 NUDCQ9Y266 331 aa23.08■■□□□ 1.28
ACSF3-213ENST00000542688 IL27Q8NEV9 243 aa23.07■■□□□ 1.28
ACSF3-213ENST00000542688 PPM1GO15355 546 aaPredicted RBP23.06■■□□□ 1.28
ACSF3-213ENST00000542688 CCDC184Q52MB2 194 aa23.06■■□□□ 1.28
ACSF3-213ENST00000542688 UBE2Q2Q8WVN8 375 aa23.04■■□□□ 1.28
ACSF3-213ENST00000542688 WASHC2CQ9Y4E1 1318 aa23.04■■□□□ 1.28
ACSF3-213ENST00000542688 PDS5BQ9NTI5 1447 aa23.02■■□□□ 1.28
ACSF3-213ENST00000542688 GCC2Q8IWJ2 1684 aa23.01■■□□□ 1.27
ACSF3-213ENST00000542688 AKNAQ7Z591 1439 aa23.01■■□□□ 1.27
ACSF3-213ENST00000542688 TCERG1O14776 1098 aaKnown RBP22.98■■□□□ 1.27
ACSF3-213ENST00000542688 PTPRKQ15262 1439 aa22.98■■□□□ 1.27
ACSF3-213ENST00000542688 NEFMP07197 916 aa22.98■■□□□ 1.27
ACSF3-213ENST00000542688 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
ACSF3-213ENST00000542688 ATP1B4Q9UN42 357 aaPredicted RBP22.96■■□□□ 1.27
ACSF3-213ENST00000542688 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
ACSF3-213ENST00000542688 FHOD3Q2V2M9 1422 aa22.96■■□□□ 1.27
ACSF3-213ENST00000542688 MYOM3Q5VTT5 1437 aa22.95■■□□□ 1.26
ACSF3-213ENST00000542688 MTUS2Q5JR59 1369 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms