RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 RAPGEF2Q9Y4G8 1499 aa9.32□□□□□ -0.92
ATXN2-215ENST00000542287 CARMIL1Q5VZK9 1371 aa9.31□□□□□ -0.92
ATXN2-215ENST00000542287 DNAJC5Q9H3Z4 198 aa9.31□□□□□ -0.92
ATXN2-215ENST00000542287 CHMP7Q8WUX9 453 aaPredicted RBP9.3□□□□□ -0.92
ATXN2-215ENST00000542287 CTTNBP2Q8WZ74 1663 aa9.3□□□□□ -0.92
ATXN2-215ENST00000542287 KIAA0586Q9BVV6 1533 aa9.28□□□□□ -0.92
ATXN2-215ENST00000542287 HRCP23327 699 aa9.28□□□□□ -0.92
ATXN2-215ENST00000542287 RIMBP3CA6NJZ7 1639 aa9.26□□□□□ -0.93
ATXN2-215ENST00000542287 RIMBP3BA6NNM3 1639 aa9.26□□□□□ -0.93
ATXN2-215ENST00000542287 RIMBP3Q9UFD9 1639 aa9.26□□□□□ -0.93
ATXN2-215ENST00000542287 IQGAP2Q13576 1575 aa9.25□□□□□ -0.93
ATXN2-215ENST00000542287 CSRNP3Q8WYN3 585 aa9.25□□□□□ -0.93
ATXN2-215ENST00000542287 UGGT2Q9NYU1 1516 aa9.24□□□□□ -0.93
ATXN2-215ENST00000542287 ARHGEF11O15085 1522 aa9.24□□□□□ -0.93
ATXN2-215ENST00000542287 FBLN2P98095 1184 aa9.22□□□□□ -0.93
ATXN2-215ENST00000542287 TRIM26Q12899 539 aaPredicted RBP9.22□□□□□ -0.93
ATXN2-215ENST00000542287 GOLGA3Q08378 1498 aa9.2□□□□□ -0.94
ATXN2-215ENST00000542287 MYT1Q01538 1121 aa9.19□□□□□ -0.94
ATXN2-215ENST00000542287 SAMD9Q5K651 1589 aa9.18□□□□□ -0.94
ATXN2-215ENST00000542287 KIAA0556O60303 1618 aa9.17□□□□□ -0.94
ATXN2-215ENST00000542287 ARAP1Q96P48 1450 aa9.17□□□□□ -0.94
ATXN2-215ENST00000542287 EFCAB5A4FU69 1503 aa9.17□□□□□ -0.94
ATXN2-215ENST00000542287 PPARGC1BQ86YN6 1023 aaKnown RBP9.17□□□□□ -0.94
ATXN2-215ENST00000542287 PRG4Q92954 1404 aaPredicted RBP9.16□□□□□ -0.94
ATXN2-215ENST00000542287 DISP1Q96F81 1524 aa9.16□□□□□ -0.94
ATXN2-215ENST00000542287 CARMIL2Q6F5E8 1435 aa9.16□□□□□ -0.94
ATXN2-215ENST00000542287 ERCC6L2Q5T890 1561 aa9.15□□□□□ -0.94
ATXN2-215ENST00000542287 JPH4Q96JJ6 628 aa9.15□□□□□ -0.94
ATXN2-215ENST00000542287 TNIKQ9UKE5 1360 aa9.12□□□□□ -0.95
ATXN2-215ENST00000542287 UHRF1BP1LA0JNW5 1464 aa9.12□□□□□ -0.95
ATXN2-215ENST00000542287 CEP162Q5TB80 1403 aa9.09□□□□□ -0.95
ATXN2-215ENST00000542287 ABCA8O94911 1581 aa9.09□□□□□ -0.95
ATXN2-215ENST00000542287 ADCY10Q96PN6 1610 aa9.07□□□□□ -0.96
ATXN2-215ENST00000542287 ABCC2Q92887 1545 aa9.07□□□□□ -0.96
ATXN2-215ENST00000542287 PTPRGP23470 1445 aa9.06□□□□□ -0.96
ATXN2-215ENST00000542287 UBTFP17480 764 aaKnown RBP9.06□□□□□ -0.96
ATXN2-215ENST00000542287 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
ATXN2-215ENST00000542287 UACAQ9BZF9 1416 aa9.05□□□□□ -0.96
ATXN2-215ENST00000542287 RAPGEF6Q8TEU7 1601 aa9.04□□□□□ -0.96
ATXN2-215ENST00000542287 TTBK1Q5TCY1 1321 aaPredicted RBP9.03□□□□□ -0.96
ATXN2-215ENST00000542287 ARHGAP35Q9NRY4 1499 aa9.03□□□□□ -0.96
ATXN2-215ENST00000542287 KDM5BQ9UGL1 1544 aa9.03□□□□□ -0.96
ATXN2-215ENST00000542287 ZCCHC11Q5TAX3 1644 aaKnown RBP9.01□□□□□ -0.97
ATXN2-215ENST00000542287 FMN1Q68DA7 1419 aa9.01□□□□□ -0.97
ATXN2-215ENST00000542287 HECW1Q76N89 1606 aa9□□□□□ -0.97
ATXN2-215ENST00000542287 CYB5RLQ6IPT4 315 aa8.99□□□□□ -0.97
ATXN2-215ENST00000542287 GLI2P10070 1586 aa8.99□□□□□ -0.97
ATXN2-215ENST00000542287 CLIP1P30622 1438 aa8.98□□□□□ -0.97
ATXN2-215ENST00000542287 FHOD3Q2V2M9 1422 aa8.98□□□□□ -0.97
ATXN2-215ENST00000542287 PLB1Q6P1J6 1458 aa8.97□□□□□ -0.97
ATXN2-215ENST00000542287 FYCO1Q9BQS8 1478 aa8.97□□□□□ -0.97
ATXN2-215ENST00000542287 CASKIN1Q8WXD9 1431 aa8.96□□□□□ -0.97
ATXN2-215ENST00000542287 NUP153P49790 1475 aaKnown RBP8.96□□□□□ -0.98
ATXN2-215ENST00000542287 RANGAP1P46060 587 aaPredicted RBP8.95□□□□□ -0.98
ATXN2-215ENST00000542287 DIP2BQ9P265 1576 aa8.95□□□□□ -0.98
ATXN2-215ENST00000542287 KIF13AQ9H1H9 1805 aa8.95□□□□□ -0.98
ATXN2-215ENST00000542287 CCDC18Q5T9S5 1454 aa8.95□□□□□ -0.98
ATXN2-215ENST00000542287 PCF11O94913 1555 aaKnown RBP8.94□□□□□ -0.98
ATXN2-215ENST00000542287 ABCC10Q5T3U5 1492 aa8.94□□□□□ -0.98
ATXN2-215ENST00000542287 LRRIQ1Q96JM4 1722 aa8.94□□□□□ -0.98
ATXN2-215ENST00000542287 ATP10BO94823 1461 aa8.93□□□□□ -0.98
ATXN2-215ENST00000542287 NPM1P06748 294 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATXN2-215ENST00000542287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.92□□□□□ -0.98
ATXN2-215ENST00000542287 CFAP43Q8NDM7 1665 aa8.92□□□□□ -0.98
ATXN2-215ENST00000542287 WDR7Q9Y4E6 1490 aa8.92□□□□□ -0.98
ATXN2-215ENST00000542287 MAP3K4Q9Y6R4 1608 aa8.92□□□□□ -0.98
ATXN2-215ENST00000542287 MAP3K1Q13233 1512 aa8.92□□□□□ -0.98
ATXN2-215ENST00000542287 ASXL2Q76L83 1435 aa8.92□□□□□ -0.98
ATXN2-215ENST00000542287 EPRSP07814 1512 aaKnown RBP8.91□□□□□ -0.98
ATXN2-215ENST00000542287 ABCA9Q8IUA7 1624 aa8.9□□□□□ -0.98
ATXN2-215ENST00000542287 ZEB1P37275 1124 aaPredicted RBP8.9□□□□□ -0.98
ATXN2-215ENST00000542287 VPS8Q8N3P4 1428 aa8.89□□□□□ -0.99
ATXN2-215ENST00000542287 P3H3Q8IVL6 736 aa8.89□□□□□ -0.99
ATXN2-215ENST00000542287 PPRC1Q5VV67 1664 aaKnown RBP8.87□□□□□ -0.99
ATXN2-215ENST00000542287 ARAP3Q8WWN8 1544 aa8.87□□□□□ -0.99
ATXN2-215ENST00000542287 MAGI3Q5TCQ9 1506 aa8.86□□□□□ -0.99
ATXN2-215ENST00000542287 CFAP74Q9C0B2 1584 aa8.86□□□□□ -0.99
ATXN2-215ENST00000542287 CDK13Q14004 1512 aaKnown RBP8.86□□□□□ -0.99
ATXN2-215ENST00000542287 KIF14Q15058 1648 aa8.85□□□□□ -0.99
ATXN2-215ENST00000542287 CCER1Q8TC90 406 aaPredicted RBP8.85□□□□□ -0.99
ATXN2-215ENST00000542287 EHBP1L1Q8N3D4 1523 aa8.85□□□□□ -0.99
ATXN2-215ENST00000542287 TIAM1Q13009 1591 aa8.85□□□□□ -0.99
ATXN2-215ENST00000542287 TROQ12816 1431 aaPredicted RBP8.85□□□□□ -0.99
ATXN2-215ENST00000542287 TEX14Q8IWB6 1497 aa8.84□□□□□ -0.99
ATXN2-215ENST00000542287 PHLDB1Q86UU1 1377 aa8.83□□□□□ -1
ATXN2-215ENST00000542287 CDK11AQ9UQ88 783 aaPredicted RBP8.83□□□□□ -1
ATXN2-215ENST00000542287 MYO5CQ9NQX4 1742 aa8.82□□□□□ -1
ATXN2-215ENST00000542287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.82□□□□□ -12e-7■■■□□ 16.3
ATXN2-215ENST00000542287 TTC37Q6PGP7 1564 aa8.81□□□□□ -1
ATXN2-215ENST00000542287 PLEKHD1A6NEE1 506 aa8.81□□□□□ -1
ATXN2-215ENST00000542287 PREX2Q70Z35 1606 aa8.81□□□□□ -1
ATXN2-215ENST00000542287 NEO1Q92859 1461 aa8.8□□□□□ -1
ATXN2-215ENST00000542287 SUPT6HQ7KZ85 1726 aaKnown RBP8.8□□□□□ -1
ATXN2-215ENST00000542287 ITSN2Q9NZM3 1697 aa8.8□□□□□ -1
ATXN2-215ENST00000542287 HNRNPUL2Q1KMD3 747 aaKnown RBP8.79□□□□□ -1
ATXN2-215ENST00000542287 SCAF1Q9H7N4 1312 aaKnown RBP8.79□□□□□ -1
ATXN2-215ENST00000542287 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
ATXN2-215ENST00000542287 CD109Q6YHK3 1445 aa8.78□□□□□ -1
ATXN2-215ENST00000542287 APLP2Q06481 763 aa8.78□□□□□ -1
ATXN2-215ENST00000542287 CDC42BPAQ5VT25 1732 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms