RNA–Protein interactions for RNA: ENST00000542200.2

AP3B2-209, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2 BASIC

Gene AP3B2, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-209ENST00000542200 TOPBP1Q92547 1522 aa14.42□□□□□ -0.1
AP3B2-209ENST00000542200 DNMBPQ6XZF7 1577 aa14.4□□□□□ -0.1
AP3B2-209ENST00000542200 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
AP3B2-209ENST00000542200 FHOD3Q2V2M9 1422 aa14.4□□□□□ -0.1
AP3B2-209ENST00000542200 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
AP3B2-209ENST00000542200 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
AP3B2-209ENST00000542200 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
AP3B2-209ENST00000542200 ABCA10Q8WWZ4 1543 aa14.36□□□□□ -0.11
AP3B2-209ENST00000542200 TIAM1Q13009 1591 aa14.36□□□□□ -0.11
AP3B2-209ENST00000542200 PHLDB1Q86UU1 1377 aa14.35□□□□□ -0.11
AP3B2-209ENST00000542200 LRRC9Q6ZRR7 1453 aa14.34□□□□□ -0.11
AP3B2-209ENST00000542200 RAB3GAP2Q9H2M9 1393 aa14.34□□□□□ -0.11
AP3B2-209ENST00000542200 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
AP3B2-209ENST00000542200 PDS5BQ9NTI5 1447 aa14.3□□□□□ -0.12
AP3B2-209ENST00000542200 PCF11O94913 1555 aaKnown RBP14.29□□□□□ -0.12
AP3B2-209ENST00000542200 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
AP3B2-209ENST00000542200 MAP3K1Q13233 1512 aa14.27□□□□□ -0.12
AP3B2-209ENST00000542200 SETD5Q9C0A6 1442 aa14.27□□□□□ -0.12
AP3B2-209ENST00000542200 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
AP3B2-209ENST00000542200 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
AP3B2-209ENST00000542200 SIN3AQ96ST3 1273 aa14.25□□□□□ -0.13
AP3B2-209ENST00000542200 FMN1Q68DA7 1419 aa14.23□□□□□ -0.13
AP3B2-209ENST00000542200 CASKIN1Q8WXD9 1431 aa14.23□□□□□ -0.13
AP3B2-209ENST00000542200 CUL7Q14999 1698 aa14.23□□□□□ -0.13
AP3B2-209ENST00000542200 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
AP3B2-209ENST00000542200 EFCAB5A4FU69 1503 aa14.22□□□□□ -0.13
AP3B2-209ENST00000542200 ARID3CA6NKF2 412 aa14.21□□□□□ -0.13
AP3B2-209ENST00000542200 CFAP43Q8NDM7 1665 aa14.18□□□□□ -0.14
AP3B2-209ENST00000542200 CTTNBP2Q8WZ74 1663 aa14.17□□□□□ -0.14
AP3B2-209ENST00000542200 MAPKBP1O60336 1514 aa14.16□□□□□ -0.14
AP3B2-209ENST00000542200 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
AP3B2-209ENST00000542200 KIF21AQ7Z4S6 1674 aa14.15□□□□□ -0.14
AP3B2-209ENST00000542200 FGD6Q6ZV73 1430 aa14.14□□□□□ -0.15
AP3B2-209ENST00000542200 ABCA5Q8WWZ7 1642 aa14.14□□□□□ -0.15
AP3B2-209ENST00000542200 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
AP3B2-209ENST00000542200 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
AP3B2-209ENST00000542200 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
AP3B2-209ENST00000542200 PELP1Q8IZL8 1130 aaKnown RBP14.11□□□□□ -0.15
AP3B2-209ENST00000542200 CHIC2Q9UKJ5 165 aa14.11□□□□□ -0.15
AP3B2-209ENST00000542200 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
AP3B2-209ENST00000542200 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
AP3B2-209ENST00000542200 NCOA2Q15596 1464 aa14.08□□□□□ -0.16
AP3B2-209ENST00000542200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.06□□□□□ -0.16
AP3B2-209ENST00000542200 SAMD9Q5K651 1589 aa14.06□□□□□ -0.16
AP3B2-209ENST00000542200 MYOM3Q5VTT5 1437 aa14.05□□□□□ -0.16
AP3B2-209ENST00000542200 TONSLQ96HA7 1378 aa14.05□□□□□ -0.16
AP3B2-209ENST00000542200 TARBP1Q13395 1621 aaKnown RBP14.05□□□□□ -0.16
AP3B2-209ENST00000542200 GRIN2BQ13224 1484 aa14.05□□□□□ -0.16
AP3B2-209ENST00000542200 PTPRKQ15262 1439 aa14.05□□□□□ -0.16
AP3B2-209ENST00000542200 TRIM52Q96A61 297 aa14.05□□□□□ -0.16
AP3B2-209ENST00000542200 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
AP3B2-209ENST00000542200 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
AP3B2-209ENST00000542200 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
AP3B2-209ENST00000542200 FBLN2P98095 1184 aa14.03□□□□□ -0.16
AP3B2-209ENST00000542200 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
AP3B2-209ENST00000542200 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.17
AP3B2-209ENST00000542200 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
AP3B2-209ENST00000542200 HFM1A2PYH4 1435 aa14□□□□□ -0.17
AP3B2-209ENST00000542200 IQGAP2Q13576 1575 aa13.99□□□□□ -0.17
AP3B2-209ENST00000542200 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
AP3B2-209ENST00000542200 SUPT6HQ7KZ85 1726 aaKnown RBP13.99□□□□□ -0.17
AP3B2-209ENST00000542200 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
AP3B2-209ENST00000542200 NAIPQ13075 1403 aa13.98□□□□□ -0.17
AP3B2-209ENST00000542200 UACAQ9BZF9 1416 aa13.97□□□□□ -0.17
AP3B2-209ENST00000542200 CDK13Q14004 1512 aaKnown RBP13.97□□□□□ -0.17
AP3B2-209ENST00000542200 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
AP3B2-209ENST00000542200 MAGI3Q5TCQ9 1506 aa13.97□□□□□ -0.17
AP3B2-209ENST00000542200 EPRSP07814 1512 aaKnown RBP13.96□□□□□ -0.17
AP3B2-209ENST00000542200 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.17
AP3B2-209ENST00000542200 ADAMTS12P58397 1594 aa13.95□□□□□ -0.18
AP3B2-209ENST00000542200 ERCC6Q03468 1493 aa13.95□□□□□ -0.18
AP3B2-209ENST00000542200 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
AP3B2-209ENST00000542200 PTPN23Q9H3S7 1636 aa13.95□□□□□ -0.18
AP3B2-209ENST00000542200 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
AP3B2-209ENST00000542200 UGGT2Q9NYU1 1516 aa13.94□□□□□ -0.18
AP3B2-209ENST00000542200 HECW1Q76N89 1606 aa13.94□□□□□ -0.18
AP3B2-209ENST00000542200 FOXD1Q16676 465 aa13.92□□□□□ -0.18
AP3B2-209ENST00000542200 ANP32CO43423 234 aa13.92□□□□□ -0.18
AP3B2-209ENST00000542200 CDK11AQ9UQ88 783 aaPredicted RBP13.91□□□□□ -0.18
AP3B2-209ENST00000542200 ZNF644Q9H582 1327 aaPredicted RBP13.9□□□□□ -0.18
AP3B2-209ENST00000542200 ZNF777Q9ULD5 760 aaPredicted RBP13.9□□□□□ -0.18
AP3B2-209ENST00000542200 KIAA0586Q9BVV6 1533 aa13.88□□□□□ -0.19
AP3B2-209ENST00000542200 MPHOSPH9Q99550 1183 aa13.88□□□□□ -0.19
AP3B2-209ENST00000542200 ARHGEF11O15085 1522 aa13.86□□□□□ -0.19
AP3B2-209ENST00000542200 WDR62O43379 1518 aa13.86□□□□□ -0.19
AP3B2-209ENST00000542200 SUPT16HQ9Y5B9 1047 aaKnown RBP13.86□□□□□ -0.19
AP3B2-209ENST00000542200 GRIN2AQ12879 1464 aa13.85□□□□□ -0.19
AP3B2-209ENST00000542200 MIA2Q96PC5 1412 aa13.85□□□□□ -0.19
AP3B2-209ENST00000542200 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
AP3B2-209ENST00000542200 CFDP1Q9UEE9 299 aaPredicted RBP13.84□□□□□ -0.19
AP3B2-209ENST00000542200 TCOF1Q13428 1488 aaKnown RBP13.84□□□□□ -0.19
AP3B2-209ENST00000542200 DISP1Q96F81 1524 aa13.84□□□□□ -0.19
AP3B2-209ENST00000542200 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
AP3B2-209ENST00000542200 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
AP3B2-209ENST00000542200 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
AP3B2-209ENST00000542200 NUP153P49790 1475 aaKnown RBP13.82□□□□□ -0.2
AP3B2-209ENST00000542200 KIAA0556O60303 1618 aa13.81□□□□□ -0.2
AP3B2-209ENST00000542200 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
AP3B2-209ENST00000542200 HSPA5P11021 654 aaKnown RBP13.81□□□□□ -0.2
AP3B2-209ENST00000542200 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms