RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
NPIPA1-206ENST00000541836 MSH5O43196 834 aa19.29■□□□□ 0.68
NPIPA1-206ENST00000541836 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
NPIPA1-206ENST00000541836 ANP32CO43423 234 aa19.27■□□□□ 0.68
NPIPA1-206ENST00000541836 CCER2I3L3R5 266 aa19.27■□□□□ 0.67
NPIPA1-206ENST00000541836 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
NPIPA1-206ENST00000541836 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
NPIPA1-206ENST00000541836 ARHGAP35Q9NRY4 1499 aa19.24■□□□□ 0.67
NPIPA1-206ENST00000541836 CUX1P39880 1505 aa19.23■□□□□ 0.67
NPIPA1-206ENST00000541836 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
NPIPA1-206ENST00000541836 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
NPIPA1-206ENST00000541836 ERICH6Q7L0X2 663 aa19.17■□□□□ 0.66
NPIPA1-206ENST00000541836 FANCIQ9NVI1 1328 aa19.15■□□□□ 0.66
NPIPA1-206ENST00000541836 TIMELESSQ9UNS1 1208 aa19.15■□□□□ 0.66
NPIPA1-206ENST00000541836 IRX6P78412 446 aaPredicted RBP19.14■□□□□ 0.65
NPIPA1-206ENST00000541836 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
NPIPA1-206ENST00000541836 CFTRP13569 1480 aa19.13■□□□□ 0.65
NPIPA1-206ENST00000541836 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
NPIPA1-206ENST00000541836 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
NPIPA1-206ENST00000541836 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.65
NPIPA1-206ENST00000541836 PRKCSHP14314 528 aaPredicted RBP19.07■□□□□ 0.64
NPIPA1-206ENST00000541836 LRRC9Q6ZRR7 1453 aa19.07■□□□□ 0.64
NPIPA1-206ENST00000541836 MAP3K1Q13233 1512 aa19.04■□□□□ 0.64
NPIPA1-206ENST00000541836 CADPSQ9ULU8 1353 aa19.04■□□□□ 0.64
NPIPA1-206ENST00000541836 TONSLQ96HA7 1378 aa19.02■□□□□ 0.63
NPIPA1-206ENST00000541836 ATP1B4Q9UN42 357 aaPredicted RBP19■□□□□ 0.63
NPIPA1-206ENST00000541836 IGF1RP08069 1367 aa18.94■□□□□ 0.62
NPIPA1-206ENST00000541836 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
NPIPA1-206ENST00000541836 PPP4R2Q9NY27 417 aa18.93■□□□□ 0.62
NPIPA1-206ENST00000541836 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
NPIPA1-206ENST00000541836 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
NPIPA1-206ENST00000541836 DEKP35659 375 aaKnown RBP18.91■□□□□ 0.62
NPIPA1-206ENST00000541836 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
NPIPA1-206ENST00000541836 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
NPIPA1-206ENST00000541836 PRDM2Q13029 1718 aa18.87■□□□□ 0.61
NPIPA1-206ENST00000541836 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
NPIPA1-206ENST00000541836 B4GALNT3Q6L9W6 998 aa18.87■□□□□ 0.61
NPIPA1-206ENST00000541836 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
NPIPA1-206ENST00000541836 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
NPIPA1-206ENST00000541836 CFAP43Q8NDM7 1665 aa18.86■□□□□ 0.61
NPIPA1-206ENST00000541836 NESP48681 1621 aa18.85■□□□□ 0.61
NPIPA1-206ENST00000541836 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
NPIPA1-206ENST00000541836 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
NPIPA1-206ENST00000541836 WASHC2AQ641Q2 1341 aa18.82■□□□□ 0.6
NPIPA1-206ENST00000541836 CCDC184Q52MB2 194 aa18.81■□□□□ 0.6
NPIPA1-206ENST00000541836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.81■□□□□ 0.64e-8■■■■□ 26
NPIPA1-206ENST00000541836 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
NPIPA1-206ENST00000541836 NBR1Q14596 966 aa18.8■□□□□ 0.6
NPIPA1-206ENST00000541836 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
NPIPA1-206ENST00000541836 FAM9BQ8IZU0 186 aa18.79■□□□□ 0.6
NPIPA1-206ENST00000541836 NOP58Q9Y2X3 529 aaKnown RBP18.79■□□□□ 0.6
NPIPA1-206ENST00000541836 FHOD3Q2V2M9 1422 aa18.78■□□□□ 0.6
NPIPA1-206ENST00000541836 FGD6Q6ZV73 1430 aa18.77■□□□□ 0.59
NPIPA1-206ENST00000541836 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
NPIPA1-206ENST00000541836 HFM1A2PYH4 1435 aa18.75■□□□□ 0.59
NPIPA1-206ENST00000541836 PAK3O75914 559 aaPredicted RBP18.74■□□□□ 0.59
NPIPA1-206ENST00000541836 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
NPIPA1-206ENST00000541836 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
NPIPA1-206ENST00000541836 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
NPIPA1-206ENST00000541836 MRS2Q9HD23 443 aa18.73■□□□□ 0.59
NPIPA1-206ENST00000541836 PTPN23Q9H3S7 1636 aa18.71■□□□□ 0.59
NPIPA1-206ENST00000541836 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
NPIPA1-206ENST00000541836 ZBED9Q6R2W3 1325 aa18.71■□□□□ 0.59
NPIPA1-206ENST00000541836 CNTLNQ9NXG0 1405 aa18.7■□□□□ 0.58
NPIPA1-206ENST00000541836 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.585e-7■■■■□ 22.4
NPIPA1-206ENST00000541836 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
NPIPA1-206ENST00000541836 PRKRIP1Q9H875 184 aaPredicted RBP18.7■□□□□ 0.58
NPIPA1-206ENST00000541836 NAIPQ13075 1403 aa18.69■□□□□ 0.58
NPIPA1-206ENST00000541836 NCOA2Q15596 1464 aa18.67■□□□□ 0.58
NPIPA1-206ENST00000541836 MTUS2Q5JR59 1369 aa18.67■□□□□ 0.58
NPIPA1-206ENST00000541836 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
NPIPA1-206ENST00000541836 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
NPIPA1-206ENST00000541836 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
NPIPA1-206ENST00000541836 DNMBPQ6XZF7 1577 aa18.64■□□□□ 0.57
NPIPA1-206ENST00000541836 C11orf95C9JLR9 678 aaPredicted RBP18.64■□□□□ 0.57
NPIPA1-206ENST00000541836 FMN1Q68DA7 1419 aa18.64■□□□□ 0.57
NPIPA1-206ENST00000541836 ANP32AP39687 249 aaKnown RBP18.62■□□□□ 0.57
NPIPA1-206ENST00000541836 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
NPIPA1-206ENST00000541836 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
NPIPA1-206ENST00000541836 EFCAB5A4FU69 1503 aa18.6■□□□□ 0.57
NPIPA1-206ENST00000541836 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
NPIPA1-206ENST00000541836 IPO9Q96P70 1041 aaKnown RBP18.59■□□□□ 0.57
NPIPA1-206ENST00000541836 CCDC136Q96JN2 1154 aa18.58■□□□□ 0.57
NPIPA1-206ENST00000541836 AKNAQ7Z591 1439 aa18.58■□□□□ 0.56
NPIPA1-206ENST00000541836 TDRD9Q8NDG6 1382 aaKnown RBP18.58■□□□□ 0.56
NPIPA1-206ENST00000541836 ABCA10Q8WWZ4 1543 aa18.58■□□□□ 0.56
NPIPA1-206ENST00000541836 CHIC2Q9UKJ5 165 aa18.58■□□□□ 0.56
NPIPA1-206ENST00000541836 NCOA1Q15788 1441 aa18.58■□□□□ 0.56
NPIPA1-206ENST00000541836 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
NPIPA1-206ENST00000541836 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
NPIPA1-206ENST00000541836 L3MBTL2Q969R5 705 aa18.57■□□□□ 0.56
NPIPA1-206ENST00000541836 ZBTB47Q9UFB7 747 aaPredicted RBP18.56■□□□□ 0.56
NPIPA1-206ENST00000541836 PDS5BQ9NTI5 1447 aa18.55■□□□□ 0.56
NPIPA1-206ENST00000541836 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
NPIPA1-206ENST00000541836 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
NPIPA1-206ENST00000541836 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
NPIPA1-206ENST00000541836 DENND4BO75064 1496 aaPredicted RBP18.52■□□□□ 0.56
NPIPA1-206ENST00000541836 SMG6Q86US8 1419 aaKnown RBP18.52■□□□□ 0.55
NPIPA1-206ENST00000541836 FOXD1Q16676 465 aa18.51■□□□□ 0.55
NPIPA1-206ENST00000541836 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms