RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 NESP48681 1621 aa17.81■□□□□ 0.44
NPC1-202ENST00000540608 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
NPC1-202ENST00000540608 ITGAEP38570 1179 aa17.79■□□□□ 0.44
NPC1-202ENST00000540608 RAB3GAP2Q9H2M9 1393 aa17.79■□□□□ 0.44
NPC1-202ENST00000540608 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
NPC1-202ENST00000540608 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
NPC1-202ENST00000540608 ABCA10Q8WWZ4 1543 aa17.77■□□□□ 0.44
NPC1-202ENST00000540608 LRRC9Q6ZRR7 1453 aa17.75■□□□□ 0.43
NPC1-202ENST00000540608 MAPKBP1O60336 1514 aa17.75■□□□□ 0.43
NPC1-202ENST00000540608 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
NPC1-202ENST00000540608 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
NPC1-202ENST00000540608 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
NPC1-202ENST00000540608 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
NPC1-202ENST00000540608 PDS5BQ9NTI5 1447 aa17.71■□□□□ 0.43
NPC1-202ENST00000540608 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
NPC1-202ENST00000540608 FHOD3Q2V2M9 1422 aa17.69■□□□□ 0.42
NPC1-202ENST00000540608 SUPT16HQ9Y5B9 1047 aaKnown RBP17.68■□□□□ 0.42
NPC1-202ENST00000540608 CFAP43Q8NDM7 1665 aa17.68■□□□□ 0.42
NPC1-202ENST00000540608 CUL7Q14999 1698 aa17.67■□□□□ 0.42
NPC1-202ENST00000540608 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
NPC1-202ENST00000540608 ATP1B4Q9UN42 357 aaPredicted RBP17.65■□□□□ 0.42
NPC1-202ENST00000540608 EFCAB5A4FU69 1503 aa17.63■□□□□ 0.41
NPC1-202ENST00000540608 KIF21AQ7Z4S6 1674 aa17.63■□□□□ 0.41
NPC1-202ENST00000540608 CTTNBP2Q8WZ74 1663 aa17.63■□□□□ 0.41
NPC1-202ENST00000540608 WDR97A6NE52 1622 aa17.63■□□□□ 0.41
NPC1-202ENST00000540608 FAM50AQ14320 339 aaKnown RBP17.62■□□□□ 0.41
NPC1-202ENST00000540608 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
NPC1-202ENST00000540608 FYCO1Q9BQS8 1478 aa17.61■□□□□ 0.41
NPC1-202ENST00000540608 CASKIN1Q8WXD9 1431 aa17.59■□□□□ 0.41
NPC1-202ENST00000540608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
NPC1-202ENST00000540608 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.41
NPC1-202ENST00000540608 TDRD9Q8NDG6 1382 aaKnown RBP17.58■□□□□ 0.41
NPC1-202ENST00000540608 AQRO60306 1485 aaKnown RBP eCLIP17.57■□□□□ 0.43e-6■■■■□ 22.7
NPC1-202ENST00000540608 ABCA5Q8WWZ7 1642 aa17.57■□□□□ 0.4
NPC1-202ENST00000540608 KCNH8Q96L42 1107 aa17.56■□□□□ 0.4
NPC1-202ENST00000540608 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
NPC1-202ENST00000540608 SNAPC4Q5SXM2 1469 aa17.53■□□□□ 0.4
NPC1-202ENST00000540608 FMN1Q68DA7 1419 aa17.53■□□□□ 0.4
NPC1-202ENST00000540608 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
NPC1-202ENST00000540608 PPP1R15AO75807 674 aaPredicted RBP17.51■□□□□ 0.39
NPC1-202ENST00000540608 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
NPC1-202ENST00000540608 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
NPC1-202ENST00000540608 LRRIQ1Q96JM4 1722 aa17.46■□□□□ 0.39
NPC1-202ENST00000540608 WDR62O43379 1518 aa17.46■□□□□ 0.38
NPC1-202ENST00000540608 FGD6Q6ZV73 1430 aa17.45■□□□□ 0.38
NPC1-202ENST00000540608 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
NPC1-202ENST00000540608 TARBP1Q13395 1621 aaKnown RBP17.44■□□□□ 0.38
NPC1-202ENST00000540608 THOC2Q8NI27 1593 aaKnown RBP17.44■□□□□ 0.38
NPC1-202ENST00000540608 MTUS2Q5JR59 1369 aa17.43■□□□□ 0.38
NPC1-202ENST00000540608 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
NPC1-202ENST00000540608 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
NPC1-202ENST00000540608 GRIN2BQ13224 1484 aa17.42■□□□□ 0.38
NPC1-202ENST00000540608 HFM1A2PYH4 1435 aa17.39■□□□□ 0.37
NPC1-202ENST00000540608 CCDC18Q5T9S5 1454 aa17.39■□□□□ 0.37
NPC1-202ENST00000540608 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
NPC1-202ENST00000540608 PTPRKQ15262 1439 aa17.38■□□□□ 0.37
NPC1-202ENST00000540608 ANP32CO43423 234 aa17.38■□□□□ 0.37
NPC1-202ENST00000540608 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
NPC1-202ENST00000540608 HIRIP3Q9BW71 556 aaPredicted RBP17.37■□□□□ 0.37
NPC1-202ENST00000540608 NCOA2Q15596 1464 aa17.37■□□□□ 0.37
NPC1-202ENST00000540608 PTPN23Q9H3S7 1636 aa17.35■□□□□ 0.37
NPC1-202ENST00000540608 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
NPC1-202ENST00000540608 MYOM3Q5VTT5 1437 aa17.34■□□□□ 0.37
NPC1-202ENST00000540608 FKBP8Q14318 412 aa17.34■□□□□ 0.37
NPC1-202ENST00000540608 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.36
NPC1-202ENST00000540608 EHBP1L1Q8N3D4 1523 aa17.32■□□□□ 0.36
NPC1-202ENST00000540608 NAIPQ13075 1403 aa17.32■□□□□ 0.36
NPC1-202ENST00000540608 MAGI3Q5TCQ9 1506 aa17.32■□□□□ 0.36
NPC1-202ENST00000540608 UGGT2Q9NYU1 1516 aa17.29■□□□□ 0.36
NPC1-202ENST00000540608 ADAMTS12P58397 1594 aa17.29■□□□□ 0.36
NPC1-202ENST00000540608 ARHGEF11O15085 1522 aa17.28■□□□□ 0.36
NPC1-202ENST00000540608 IQGAP2Q13576 1575 aa17.28■□□□□ 0.36
NPC1-202ENST00000540608 BCANQ96GW7 911 aa17.28■□□□□ 0.36
NPC1-202ENST00000540608 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
NPC1-202ENST00000540608 NEFLP07196 543 aa17.26■□□□□ 0.35
NPC1-202ENST00000540608 TRIM52Q96A61 297 aa17.26■□□□□ 0.35
NPC1-202ENST00000540608 HECW1Q76N89 1606 aa17.25■□□□□ 0.35
NPC1-202ENST00000540608 KDM5BQ9UGL1 1544 aa17.24■□□□□ 0.35
NPC1-202ENST00000540608 EPRSP07814 1512 aaKnown RBP17.22■□□□□ 0.35
NPC1-202ENST00000540608 CDK13Q14004 1512 aaKnown RBP17.21■□□□□ 0.35
NPC1-202ENST00000540608 ZNF608Q9ULD9 1512 aaPredicted RBP17.21■□□□□ 0.34
NPC1-202ENST00000540608 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.34
NPC1-202ENST00000540608 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
NPC1-202ENST00000540608 RRP7BPQ9NSQ0 103 aa17.18■□□□□ 0.34
NPC1-202ENST00000540608 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
NPC1-202ENST00000540608 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
NPC1-202ENST00000540608 AKNAQ7Z591 1439 aa17.17■□□□□ 0.34
NPC1-202ENST00000540608 GCC2Q8IWJ2 1684 aa17.17■□□□□ 0.34
NPC1-202ENST00000540608 DENND4BO75064 1496 aaPredicted RBP17.15■□□□□ 0.34
NPC1-202ENST00000540608 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
NPC1-202ENST00000540608 KDM6BO15054 1643 aa17.13■□□□□ 0.33
NPC1-202ENST00000540608 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
NPC1-202ENST00000540608 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
NPC1-202ENST00000540608 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
NPC1-202ENST00000540608 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
NPC1-202ENST00000540608 KIAA0556O60303 1618 aa17.1■□□□□ 0.33
NPC1-202ENST00000540608 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
NPC1-202ENST00000540608 MPHOSPH9Q99550 1183 aa17.1■□□□□ 0.33
NPC1-202ENST00000540608 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
NPC1-202ENST00000540608 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms