RNA–Protein interactions for RNA: ENST00000540256.1

PPFIBP1-211, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 424 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-211ENST00000540256 BAZ1BQ9UIG0 1483 aaKnown RBP10.6□□□□□ -0.71
PPFIBP1-211ENST00000540256 NCAPD3P42695 1498 aa10.58□□□□□ -0.72
PPFIBP1-211ENST00000540256 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
PPFIBP1-211ENST00000540256 FBLN2P98095 1184 aa10.58□□□□□ -0.72
PPFIBP1-211ENST00000540256 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
PPFIBP1-211ENST00000540256 KIF21BO75037 1637 aa10.52□□□□□ -0.73
PPFIBP1-211ENST00000540256 CEP164Q9UPV0 1460 aa10.52□□□□□ -0.73
PPFIBP1-211ENST00000540256 SOGA1O94964 1423 aa10.51□□□□□ -0.73
PPFIBP1-211ENST00000540256 OSCARQ8IYS5 282 aa10.51□□□□□ -0.73
PPFIBP1-211ENST00000540256 PRDM2Q13029 1718 aa10.5□□□□□ -0.73
PPFIBP1-211ENST00000540256 ABCC8Q09428 1581 aa10.49□□□□□ -0.73
PPFIBP1-211ENST00000540256 RBM42Q9BTD8 480 aaKnown RBP10.48□□□□□ -0.73
PPFIBP1-211ENST00000540256 VPS8Q8N3P4 1428 aa10.46□□□□□ -0.74
PPFIBP1-211ENST00000540256 UBTFP17480 764 aaKnown RBP10.44□□□□□ -0.74
PPFIBP1-211ENST00000540256 CLIP1P30622 1438 aa10.42□□□□□ -0.74
PPFIBP1-211ENST00000540256 MIER1Q8N108 512 aa10.42□□□□□ -0.74
PPFIBP1-211ENST00000540256 RUSC2Q8N2Y8 1516 aa10.4□□□□□ -0.74
PPFIBP1-211ENST00000540256 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
PPFIBP1-211ENST00000540256 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
PPFIBP1-211ENST00000540256 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
PPFIBP1-211ENST00000540256 LAMC3Q9Y6N6 1575 aa10.38□□□□□ -0.75
PPFIBP1-211ENST00000540256 CUX2O14529 1486 aa10.36□□□□□ -0.75
PPFIBP1-211ENST00000540256 ERICH3Q5RHP9 1530 aa10.35□□□□□ -0.75
PPFIBP1-211ENST00000540256 AKT1S1Q96B36 256 aa10.33□□□□□ -0.76
PPFIBP1-211ENST00000540256 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
PPFIBP1-211ENST00000540256 TTBK1Q5TCY1 1321 aaPredicted RBP10.33□□□□□ -0.76
PPFIBP1-211ENST00000540256 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
PPFIBP1-211ENST00000540256 DHX57Q6P158 1386 aaKnown RBP10.31□□□□□ -0.76
PPFIBP1-211ENST00000540256 RRBP1Q9P2E9 1410 aaKnown RBP10.3□□□□□ -0.76
PPFIBP1-211ENST00000540256 SSUH2Q9Y2M2 353 aa10.29□□□□□ -0.76
PPFIBP1-211ENST00000540256 CFTRP13569 1480 aa10.29□□□□□ -0.76
PPFIBP1-211ENST00000540256 PRXQ9BXM0 1461 aa10.29□□□□□ -0.76
PPFIBP1-211ENST00000540256 TOP2BQ02880 1626 aa10.29□□□□□ -0.76
PPFIBP1-211ENST00000540256 RAPGEF2Q9Y4G8 1499 aa10.27□□□□□ -0.77
PPFIBP1-211ENST00000540256 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
PPFIBP1-211ENST00000540256 SPDYE4A6NLX3 237 aa10.26□□□□□ -0.77
PPFIBP1-211ENST00000540256 YTHDC1Q96MU7 727 aaKnown RBP10.26□□□□□ -0.77
PPFIBP1-211ENST00000540256 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
PPFIBP1-211ENST00000540256 MAP3K1Q13233 1512 aa10.25□□□□□ -0.77
PPFIBP1-211ENST00000540256 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
PPFIBP1-211ENST00000540256 SUPT16HQ9Y5B9 1047 aaKnown RBP10.25□□□□□ -0.77
PPFIBP1-211ENST00000540256 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
PPFIBP1-211ENST00000540256 PDS5BQ9NTI5 1447 aa10.24□□□□□ -0.77
PPFIBP1-211ENST00000540256 KIF21AQ7Z4S6 1674 aa10.22□□□□□ -0.77
PPFIBP1-211ENST00000540256 ARAP1Q96P48 1450 aa10.21□□□□□ -0.78
PPFIBP1-211ENST00000540256 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
PPFIBP1-211ENST00000540256 CCNB3Q8WWL7 1395 aa10.17□□□□□ -0.78
PPFIBP1-211ENST00000540256 FKBP8Q14318 412 aa10.15□□□□□ -0.78
PPFIBP1-211ENST00000540256 ANP32EQ9BTT0 268 aa10.15□□□□□ -0.78
PPFIBP1-211ENST00000540256 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.78
PPFIBP1-211ENST00000540256 KIF27Q86VH2 1401 aa10.15□□□□□ -0.79
PPFIBP1-211ENST00000540256 NESP48681 1621 aa10.15□□□□□ -0.79
PPFIBP1-211ENST00000540256 ERCC6Q03468 1493 aa10.14□□□□□ -0.79
PPFIBP1-211ENST00000540256 DNMBPQ6XZF7 1577 aa10.14□□□□□ -0.79
PPFIBP1-211ENST00000540256 CCER2I3L3R5 266 aa10.13□□□□□ -0.79
PPFIBP1-211ENST00000540256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.13□□□□□ -0.79
PPFIBP1-211ENST00000540256 PITPNM1O00562 1244 aa10.12□□□□□ -0.79
PPFIBP1-211ENST00000540256 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
PPFIBP1-211ENST00000540256 THOC2Q8NI27 1593 aaKnown RBP10.1□□□□□ -0.79
PPFIBP1-211ENST00000540256 KANK4Q5T7N3 995 aaPredicted RBP10.1□□□□□ -0.79
PPFIBP1-211ENST00000540256 SPDYE1Q8NFV5 336 aaPredicted RBP10.1□□□□□ -0.79
PPFIBP1-211ENST00000540256 MRC2Q9UBG0 1479 aa10.1□□□□□ -0.79
PPFIBP1-211ENST00000540256 SETD5Q9C0A6 1442 aa10.09□□□□□ -0.79
PPFIBP1-211ENST00000540256 ARHGAP35Q9NRY4 1499 aa10.09□□□□□ -0.79
PPFIBP1-211ENST00000540256 WDR62O43379 1518 aa10.08□□□□□ -0.8
PPFIBP1-211ENST00000540256 CLEC11AQ9Y240 323 aa10.08□□□□□ -0.8
PPFIBP1-211ENST00000540256 MAPKBP1O60336 1514 aa10.07□□□□□ -0.8
PPFIBP1-211ENST00000540256 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
PPFIBP1-211ENST00000540256 PROM2Q8N271 834 aa10.06□□□□□ -0.8
PPFIBP1-211ENST00000540256 CUX1P39880 1505 aa10.06□□□□□ -0.8
PPFIBP1-211ENST00000540256 RAB3GAP2Q9H2M9 1393 aa10.05□□□□□ -0.8
PPFIBP1-211ENST00000540256 PPP1R15AO75807 674 aaPredicted RBP10.05□□□□□ -0.8
PPFIBP1-211ENST00000540256 TOPBP1Q92547 1522 aa10.05□□□□□ -0.8
PPFIBP1-211ENST00000540256 TIAM1Q13009 1591 aa10.05□□□□□ -0.8
PPFIBP1-211ENST00000540256 ERICH6BQ5W0A0 696 aa10.04□□□□□ -0.8
PPFIBP1-211ENST00000540256 FHAD1B1AJZ9 1412 aa10.04□□□□□ -0.8
PPFIBP1-211ENST00000540256 LRRC9Q6ZRR7 1453 aa10.03□□□□□ -0.8
PPFIBP1-211ENST00000540256 IGF1RP08069 1367 aa10.01□□□□□ -0.81
PPFIBP1-211ENST00000540256 URB2Q14146 1524 aaKnown RBP10.01□□□□□ -0.81
PPFIBP1-211ENST00000540256 AQRO60306 1485 aaKnown RBP eCLIP10□□□□□ -0.81
PPFIBP1-211ENST00000540256 NEFLP07196 543 aa10□□□□□ -0.81
PPFIBP1-211ENST00000540256 FGD5Q6ZNL6 1462 aa9.98□□□□□ -0.81
PPFIBP1-211ENST00000540256 STAG3Q9UJ98 1225 aa9.98□□□□□ -0.81
PPFIBP1-211ENST00000540256 PRR29P0C7W0 189 aa9.97□□□□□ -0.81
PPFIBP1-211ENST00000540256 MYT1LQ9UL68 1186 aa9.97□□□□□ -0.81
PPFIBP1-211ENST00000540256 POLA1P09884 1462 aaPredicted RBP9.97□□□□□ -0.81
PPFIBP1-211ENST00000540256 CFAP43Q8NDM7 1665 aa9.96□□□□□ -0.81
PPFIBP1-211ENST00000540256 PIP4P2Q8N4L2 257 aa9.96□□□□□ -0.82
PPFIBP1-211ENST00000540256 IFT140Q96RY7 1462 aa9.96□□□□□ -0.82
PPFIBP1-211ENST00000540256 ANP32CO43423 234 aa9.95□□□□□ -0.82
PPFIBP1-211ENST00000540256 FXR2P51116 673 aaKnown RBP eCLIP9.95□□□□□ -0.82
PPFIBP1-211ENST00000540256 RBM19Q9Y4C8 960 aaKnown RBP9.95□□□□□ -0.82
PPFIBP1-211ENST00000540256 FANCIQ9NVI1 1328 aa9.95□□□□□ -0.82
PPFIBP1-211ENST00000540256 PBRM1Q86U86 1689 aa9.94□□□□□ -0.82
PPFIBP1-211ENST00000540256 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
PPFIBP1-211ENST00000540256 EFCAB5A4FU69 1503 aa9.94□□□□□ -0.82
PPFIBP1-211ENST00000540256 ABCA10Q8WWZ4 1543 aa9.94□□□□□ -0.82
PPFIBP1-211ENST00000540256 CARMIL1Q5VZK9 1371 aa9.94□□□□□ -0.82
PPFIBP1-211ENST00000540256 POTEHQ6S545 545 aa9.94□□□□□ -0.82
PPFIBP1-211ENST00000540256 FYCO1Q9BQS8 1478 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms