RNA–Protein interactions for RNA: ENST00000540256.1

PPFIBP1-211, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 424 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-211ENST00000540256 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
PPFIBP1-211ENST00000540256 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
PPFIBP1-211ENST00000540256 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
PPFIBP1-211ENST00000540256 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
PPFIBP1-211ENST00000540256 FOXD1Q16676 465 aa14.67□□□□□ -0.06
PPFIBP1-211ENST00000540256 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
PPFIBP1-211ENST00000540256 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
PPFIBP1-211ENST00000540256 NISCHQ9Y2I1 1504 aa14.01□□□□□ -0.17
PPFIBP1-211ENST00000540256 ADRA2BP18089 450 aa14.01□□□□□ -0.17
PPFIBP1-211ENST00000540256 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
PPFIBP1-211ENST00000540256 MSH5O43196 834 aa13.55□□□□□ -0.24
PPFIBP1-211ENST00000540256 PPP4R3CPQ6ZMV5 832 aa12.83□□□□□ -0.36
PPFIBP1-211ENST00000540256 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
PPFIBP1-211ENST00000540256 MAPK8IP2Q13387 824 aaPredicted RBP12.76□□□□□ -0.37
PPFIBP1-211ENST00000540256 POTEDQ86YR6 584 aa12.59□□□□□ -0.39
PPFIBP1-211ENST00000540256 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
PPFIBP1-211ENST00000540256 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
PPFIBP1-211ENST00000540256 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
PPFIBP1-211ENST00000540256 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
PPFIBP1-211ENST00000540256 KCNA4P22459 653 aa12.39□□□□□ -0.43
PPFIBP1-211ENST00000540256 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.45
PPFIBP1-211ENST00000540256 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
PPFIBP1-211ENST00000540256 HOXD11P31277 338 aaPredicted RBP12.26□□□□□ -0.45
PPFIBP1-211ENST00000540256 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
PPFIBP1-211ENST00000540256 ZCCHC6Q5VYS8 1495 aaKnown RBP11.91□□□□□ -0.5
PPFIBP1-211ENST00000540256 DNAJC5BQ9UF47 199 aa11.91□□□□□ -0.5
PPFIBP1-211ENST00000540256 HRCP23327 699 aa11.83□□□□□ -0.52
PPFIBP1-211ENST00000540256 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
PPFIBP1-211ENST00000540256 SHROOM4Q9ULL8 1493 aa11.75□□□□□ -0.53
PPFIBP1-211ENST00000540256 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
PPFIBP1-211ENST00000540256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.54
PPFIBP1-211ENST00000540256 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
PPFIBP1-211ENST00000540256 ABCC9O60706 1549 aa11.66□□□□□ -0.54
PPFIBP1-211ENST00000540256 MYO15BQ96JP2 1530 aa11.64□□□□□ -0.55
PPFIBP1-211ENST00000540256 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
PPFIBP1-211ENST00000540256 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
PPFIBP1-211ENST00000540256 NACADO15069 1562 aa11.58□□□□□ -0.55
PPFIBP1-211ENST00000540256 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
PPFIBP1-211ENST00000540256 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
PPFIBP1-211ENST00000540256 PCGF6Q9BYE7 350 aa11.47□□□□□ -0.57
PPFIBP1-211ENST00000540256 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
PPFIBP1-211ENST00000540256 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
PPFIBP1-211ENST00000540256 CACNB1Q02641 598 aaPredicted RBP11.42□□□□□ -0.58
PPFIBP1-211ENST00000540256 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
PPFIBP1-211ENST00000540256 TRIM26Q12899 539 aaPredicted RBP11.41□□□□□ -0.58
PPFIBP1-211ENST00000540256 ZBTB22O15209 634 aa11.4□□□□□ -0.58
PPFIBP1-211ENST00000540256 PELP1Q8IZL8 1130 aaKnown RBP11.39□□□□□ -0.59
PPFIBP1-211ENST00000540256 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
PPFIBP1-211ENST00000540256 MYCNP04198 464 aaPredicted RBP11.33□□□□□ -0.6
PPFIBP1-211ENST00000540256 UNC13AQ9UPW8 1703 aa11.3□□□□□ -0.6
PPFIBP1-211ENST00000540256 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
PPFIBP1-211ENST00000540256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
PPFIBP1-211ENST00000540256 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.61
PPFIBP1-211ENST00000540256 PPARGC1BQ86YN6 1023 aaKnown RBP11.25□□□□□ -0.61
PPFIBP1-211ENST00000540256 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
PPFIBP1-211ENST00000540256 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
PPFIBP1-211ENST00000540256 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
PPFIBP1-211ENST00000540256 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
PPFIBP1-211ENST00000540256 SPINK5Q9NQ38 1064 aaPredicted RBP11.22□□□□□ -0.61
PPFIBP1-211ENST00000540256 APLP2Q06481 763 aa11.18□□□□□ -0.62
PPFIBP1-211ENST00000540256 CAPN15O75808 1086 aa11.17□□□□□ -0.62
PPFIBP1-211ENST00000540256 RSF1Q96T23 1441 aaPredicted RBP11.15□□□□□ -0.62
PPFIBP1-211ENST00000540256 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
PPFIBP1-211ENST00000540256 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
PPFIBP1-211ENST00000540256 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
PPFIBP1-211ENST00000540256 ATF5Q9Y2D1 282 aaPredicted RBP11.06□□□□□ -0.64
PPFIBP1-211ENST00000540256 BICRAQ9NZM4 1560 aa11.05□□□□□ -0.64
PPFIBP1-211ENST00000540256 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
PPFIBP1-211ENST00000540256 DSG3P32926 999 aa11.01□□□□□ -0.65
PPFIBP1-211ENST00000540256 MYT1Q01538 1121 aa11□□□□□ -0.65
PPFIBP1-211ENST00000540256 ABCB7O75027 752 aa10.96□□□□□ -0.65
PPFIBP1-211ENST00000540256 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
PPFIBP1-211ENST00000540256 POLA2Q14181 598 aa10.88□□□□□ -0.67
PPFIBP1-211ENST00000540256 BAZ1AQ9NRL2 1556 aaPredicted RBP10.88□□□□□ -0.67
PPFIBP1-211ENST00000540256 ACIN1Q9UKV3 1341 aaKnown RBP10.87□□□□□ -0.67
PPFIBP1-211ENST00000540256 SMARCA4P51532 1647 aa10.83□□□□□ -0.68
PPFIBP1-211ENST00000540256 CENPBP07199 599 aaPredicted RBP10.82□□□□□ -0.68
PPFIBP1-211ENST00000540256 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
PPFIBP1-211ENST00000540256 EIF4G1Q04637 1599 aaKnown RBP10.81□□□□□ -0.68
PPFIBP1-211ENST00000540256 MROH2BQ7Z745 1585 aa10.8□□□□□ -0.68
PPFIBP1-211ENST00000540256 EEA1Q15075 1411 aa10.79□□□□□ -0.68
PPFIBP1-211ENST00000540256 CECR2Q9BXF3 1484 aa10.77□□□□□ -0.69
PPFIBP1-211ENST00000540256 PEG3Q9GZU2 1588 aa10.75□□□□□ -0.69
PPFIBP1-211ENST00000540256 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
PPFIBP1-211ENST00000540256 CCER1Q8TC90 406 aaPredicted RBP10.75□□□□□ -0.69
PPFIBP1-211ENST00000540256 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
PPFIBP1-211ENST00000540256 SMARCA2P51531 1590 aa10.74□□□□□ -0.69
PPFIBP1-211ENST00000540256 DIEXFQ68CQ4 756 aaKnown RBP10.73□□□□□ -0.69
PPFIBP1-211ENST00000540256 NEUROD1Q13562 356 aa10.71□□□□□ -0.69
PPFIBP1-211ENST00000540256 WIZO95785 1651 aa10.7□□□□□ -0.7
PPFIBP1-211ENST00000540256 TOP2AP11388 1531 aaKnown RBP10.69□□□□□ -0.7
PPFIBP1-211ENST00000540256 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
PPFIBP1-211ENST00000540256 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
PPFIBP1-211ENST00000540256 ZNF316A6NFI3 1004 aaPredicted RBP10.66□□□□□ -0.7
PPFIBP1-211ENST00000540256 ZBTB12Q9Y330 459 aaPredicted RBP10.66□□□□□ -0.7
PPFIBP1-211ENST00000540256 CEP162Q5TB80 1403 aa10.66□□□□□ -0.7
PPFIBP1-211ENST00000540256 GTF3C3Q9Y5Q9 886 aa10.63□□□□□ -0.71
PPFIBP1-211ENST00000540256 CLSPNQ9HAW4 1339 aa10.62□□□□□ -0.71
PPFIBP1-211ENST00000540256 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
PPFIBP1-211ENST00000540256 CCDC88BA6NC98 1476 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms