RNA–Protein interactions for RNA: ENST00000540249.5

PDHA1-212, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene PDHA1, Length 3,277 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-212ENST00000540249 ANP32CO43423 234 aa19.2■□□□□ 0.66
PDHA1-212ENST00000540249 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
PDHA1-212ENST00000540249 PHLDB1Q86UU1 1377 aa19.19■□□□□ 0.66
PDHA1-212ENST00000540249 CUX2O14529 1486 aa19.19■□□□□ 0.66
PDHA1-212ENST00000540249 WDR97A6NE52 1622 aa19.18■□□□□ 0.66
PDHA1-212ENST00000540249 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
PDHA1-212ENST00000540249 BIVM-ERCC5R4GMW8 1640 aa19.13■□□□□ 0.65
PDHA1-212ENST00000540249 IGF1RP08069 1367 aa19.12■□□□□ 0.65
PDHA1-212ENST00000540249 PPP1R15AO75807 674 aaPredicted RBP19.12■□□□□ 0.65
PDHA1-212ENST00000540249 CARMIL1Q5VZK9 1371 aa19.11■□□□□ 0.65
PDHA1-212ENST00000540249 RBM19Q9Y4C8 960 aaKnown RBP19.1■□□□□ 0.65
PDHA1-212ENST00000540249 CNGB1Q14028 1251 aaPredicted RBP19.09■□□□□ 0.65
PDHA1-212ENST00000540249 HNRNPUQ00839 825 aaKnown RBP eCLIP19.06■□□□□ 0.64
PDHA1-212ENST00000540249 TONSLQ96HA7 1378 aa19.05■□□□□ 0.64
PDHA1-212ENST00000540249 LRRC9Q6ZRR7 1453 aa19.04■□□□□ 0.64
PDHA1-212ENST00000540249 FHOD3Q2V2M9 1422 aa19.04■□□□□ 0.64
PDHA1-212ENST00000540249 CHIC2Q9UKJ5 165 aa19.01■□□□□ 0.63
PDHA1-212ENST00000540249 TIAM1Q13009 1591 aa19.01■□□□□ 0.63
PDHA1-212ENST00000540249 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
PDHA1-212ENST00000540249 CFTRP13569 1480 aa18.97■□□□□ 0.63
PDHA1-212ENST00000540249 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
PDHA1-212ENST00000540249 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
PDHA1-212ENST00000540249 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
PDHA1-212ENST00000540249 CCER2I3L3R5 266 aa18.93■□□□□ 0.62
PDHA1-212ENST00000540249 FGD5Q6ZNL6 1462 aa18.93■□□□□ 0.62
PDHA1-212ENST00000540249 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
PDHA1-212ENST00000540249 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
PDHA1-212ENST00000540249 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
PDHA1-212ENST00000540249 FAM9BQ8IZU0 186 aa18.9■□□□□ 0.62
PDHA1-212ENST00000540249 ERICH6Q7L0X2 663 aa18.89■□□□□ 0.61
PDHA1-212ENST00000540249 FOXD1Q16676 465 aa18.88■□□□□ 0.61
PDHA1-212ENST00000540249 PCF11O94913 1555 aaKnown RBP18.87■□□□□ 0.61
PDHA1-212ENST00000540249 RAD54L2Q9Y4B4 1467 aa18.87■□□□□ 0.61
PDHA1-212ENST00000540249 MSH5O43196 834 aa18.86■□□□□ 0.61
PDHA1-212ENST00000540249 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
PDHA1-212ENST00000540249 CCDC184Q52MB2 194 aa18.85■□□□□ 0.61
PDHA1-212ENST00000540249 TIMELESSQ9UNS1 1208 aa18.85■□□□□ 0.61
PDHA1-212ENST00000540249 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
PDHA1-212ENST00000540249 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
PDHA1-212ENST00000540249 HSPA5P11021 654 aaKnown RBP18.84■□□□□ 0.61
PDHA1-212ENST00000540249 HMGXB3Q12766 1538 aa18.83■□□□□ 0.6
PDHA1-212ENST00000540249 CCDC18Q5T9S5 1454 aa18.81■□□□□ 0.6
PDHA1-212ENST00000540249 PTPRKQ15262 1439 aa18.8■□□□□ 0.6
PDHA1-212ENST00000540249 B4GALNT3Q6L9W6 998 aa18.78■□□□□ 0.6
PDHA1-212ENST00000540249 FGD6Q6ZV73 1430 aa18.78■□□□□ 0.6
PDHA1-212ENST00000540249 WASHC2AQ641Q2 1341 aa18.77■□□□□ 0.6
PDHA1-212ENST00000540249 MAP3K1Q13233 1512 aa18.75■□□□□ 0.59
PDHA1-212ENST00000540249 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.593e-6■■■□□ 18.4
PDHA1-212ENST00000540249 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
PDHA1-212ENST00000540249 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
PDHA1-212ENST00000540249 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDHA1-212ENST00000540249 ZNF326Q5BKZ1 582 aaKnown RBP18.71■□□□□ 0.59
PDHA1-212ENST00000540249 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
PDHA1-212ENST00000540249 CASKIN1Q8WXD9 1431 aa18.7■□□□□ 0.58
PDHA1-212ENST00000540249 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
PDHA1-212ENST00000540249 L3MBTL2Q969R5 705 aa18.69■□□□□ 0.58
PDHA1-212ENST00000540249 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
PDHA1-212ENST00000540249 FYCO1Q9BQS8 1478 aa18.67■□□□□ 0.58
PDHA1-212ENST00000540249 NAIPQ13075 1403 aa18.66■□□□□ 0.58
PDHA1-212ENST00000540249 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
PDHA1-212ENST00000540249 NESP48681 1621 aa18.65■□□□□ 0.58
PDHA1-212ENST00000540249 HFM1A2PYH4 1435 aa18.64■□□□□ 0.57
PDHA1-212ENST00000540249 FMN1Q68DA7 1419 aa18.64■□□□□ 0.57
PDHA1-212ENST00000540249 NCOA2Q15596 1464 aa18.63■□□□□ 0.57
PDHA1-212ENST00000540249 MPHOSPH9Q99550 1183 aa18.63■□□□□ 0.57
PDHA1-212ENST00000540249 PPP4R2Q9NY27 417 aa18.62■□□□□ 0.57
PDHA1-212ENST00000540249 NBR1Q14596 966 aa18.61■□□□□ 0.57
PDHA1-212ENST00000540249 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
PDHA1-212ENST00000540249 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
PDHA1-212ENST00000540249 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
PDHA1-212ENST00000540249 MYOM3Q5VTT5 1437 aa18.59■□□□□ 0.57
PDHA1-212ENST00000540249 NBPF8Q3BBV2 869 aa18.57■□□□□ 0.56
PDHA1-212ENST00000540249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.56■□□□□ 0.56
PDHA1-212ENST00000540249 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
PDHA1-212ENST00000540249 FANCIQ9NVI1 1328 aa18.54■□□□□ 0.56
PDHA1-212ENST00000540249 TOPBP1Q92547 1522 aa18.54■□□□□ 0.56
PDHA1-212ENST00000540249 SALL2Q9Y467 1007 aaPredicted RBP18.53■□□□□ 0.56
PDHA1-212ENST00000540249 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
PDHA1-212ENST00000540249 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
PDHA1-212ENST00000540249 EFCAB5A4FU69 1503 aa18.51■□□□□ 0.55
PDHA1-212ENST00000540249 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
PDHA1-212ENST00000540249 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
PDHA1-212ENST00000540249 CCDC7Q96M83 1385 aa18.5■□□□□ 0.55
PDHA1-212ENST00000540249 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
PDHA1-212ENST00000540249 KIF7Q2M1P5 1343 aa18.49■□□□□ 0.55
PDHA1-212ENST00000540249 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
PDHA1-212ENST00000540249 KDM5BQ9UGL1 1544 aa18.47■□□□□ 0.55
PDHA1-212ENST00000540249 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
PDHA1-212ENST00000540249 AKNAQ7Z591 1439 aa18.45■□□□□ 0.54
PDHA1-212ENST00000540249 KDM6BO15054 1643 aa18.45■□□□□ 0.54
PDHA1-212ENST00000540249 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
PDHA1-212ENST00000540249 PRDM2Q13029 1718 aa18.45■□□□□ 0.54
PDHA1-212ENST00000540249 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
PDHA1-212ENST00000540249 ZBED9Q6R2W3 1325 aa18.44■□□□□ 0.54
PDHA1-212ENST00000540249 CC2D2AQ9P2K1 1620 aa18.43■□□□□ 0.54
PDHA1-212ENST00000540249 DEKP35659 375 aaKnown RBP18.43■□□□□ 0.54
PDHA1-212ENST00000540249 NPM2Q86SE8 214 aaKnown RBP18.42■□□□□ 0.54
PDHA1-212ENST00000540249 DENND4BO75064 1496 aaPredicted RBP18.42■□□□□ 0.54
PDHA1-212ENST00000540249 MAGI3Q5TCQ9 1506 aa18.42■□□□□ 0.54
PDHA1-212ENST00000540249 KDM2AQ9Y2K7 1162 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms