RNA–Protein interactions for RNA: ENST00000539835.1

PRB3-203, Transcript of proline rich protein BstNI subfamily 3, humanhuman

TSL 2

Gene PRB3, Length 476 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRB3-203ENST00000539835 ARHGEF11O15085 1522 aa8.7□□□□□ -1.02
PRB3-203ENST00000539835 LAMC3Q9Y6N6 1575 aa8.69□□□□□ -1.02
PRB3-203ENST00000539835 SSUH2Q9Y2M2 353 aa8.69□□□□□ -1.02
PRB3-203ENST00000539835 PDS5BQ9NTI5 1447 aa8.68□□□□□ -1.02
PRB3-203ENST00000539835 HMGXB3Q12766 1538 aa8.67□□□□□ -1.02
PRB3-203ENST00000539835 WDR62O43379 1518 aa8.65□□□□□ -1.02
PRB3-203ENST00000539835 PRKAR2AP13861 404 aaKnown RBP8.65□□□□□ -1.02
PRB3-203ENST00000539835 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
PRB3-203ENST00000539835 ARAP1Q96P48 1450 aa8.6□□□□□ -1.03
PRB3-203ENST00000539835 EHMT2Q96KQ7 1210 aa8.6□□□□□ -1.03
PRB3-203ENST00000539835 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
PRB3-203ENST00000539835 EVX2Q03828 476 aa8.57□□□□□ -1.04
PRB3-203ENST00000539835 CADPSQ9ULU8 1353 aa8.56□□□□□ -1.04
PRB3-203ENST00000539835 BAZ1BQ9UIG0 1483 aaKnown RBP8.54□□□□□ -1.04
PRB3-203ENST00000539835 CHADLQ6NUI6 762 aa8.53□□□□□ -1.04
PRB3-203ENST00000539835 C19orf67A6NJJ6 358 aa8.5□□□□□ -1.05
PRB3-203ENST00000539835 SMARCA4P51532 1647 aa8.5□□□□□ -1.05
PRB3-203ENST00000539835 KDM4FA0A1W2PPD8 638 aa8.46□□□□□ -1.06
PRB3-203ENST00000539835 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.06
PRB3-203ENST00000539835 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
PRB3-203ENST00000539835 ZNF608Q9ULD9 1512 aaPredicted RBP8.44□□□□□ -1.06
PRB3-203ENST00000539835 RSF1Q96T23 1441 aaPredicted RBP8.44□□□□□ -1.06
PRB3-203ENST00000539835 URB2Q14146 1524 aaKnown RBP8.44□□□□□ -1.06
PRB3-203ENST00000539835 FANCD2Q9BXW9 1451 aa8.42□□□□□ -1.06
PRB3-203ENST00000539835 GABBR2O75899 941 aa8.4□□□□□ -1.06
PRB3-203ENST00000539835 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.06
PRB3-203ENST00000539835 SPDYE4A6NLX3 237 aa8.39□□□□□ -1.07
PRB3-203ENST00000539835 STAG3Q9UJ98 1225 aa8.39□□□□□ -1.07
PRB3-203ENST00000539835 CD44P16070 742 aaKnown RBP8.36□□□□□ -1.07
PRB3-203ENST00000539835 IFT140Q96RY7 1462 aa8.33□□□□□ -1.08
PRB3-203ENST00000539835 CHD1O14646 1710 aa8.32□□□□□ -1.08
PRB3-203ENST00000539835 FBXO41Q8TF61 875 aa8.32□□□□□ -1.08
PRB3-203ENST00000539835 CFTRP13569 1480 aa8.32□□□□□ -1.08
PRB3-203ENST00000539835 MROH2BQ7Z745 1585 aa8.31□□□□□ -1.08
PRB3-203ENST00000539835 CREBZFQ9NS37 354 aa8.3□□□□□ -1.08
PRB3-203ENST00000539835 CLASP1Q7Z460 1538 aa8.29□□□□□ -1.08
PRB3-203ENST00000539835 AQRO60306 1485 aaKnown RBP eCLIP8.28□□□□□ -1.08
PRB3-203ENST00000539835 SOCS7O14512 581 aa8.28□□□□□ -1.08
PRB3-203ENST00000539835 ILDR2Q71H61 639 aa8.28□□□□□ -1.08
PRB3-203ENST00000539835 CLCN6P51797 869 aa8.27□□□□□ -1.09
PRB3-203ENST00000539835 EIF4G3O43432 1585 aaKnown RBP8.27□□□□□ -1.09
PRB3-203ENST00000539835 LMTK3Q96Q04 1460 aa8.26□□□□□ -1.09
PRB3-203ENST00000539835 ZRANB1Q9UGI0 708 aa8.25□□□□□ -1.09
PRB3-203ENST00000539835 GAPVD1Q14C86 1478 aa8.24□□□□□ -1.09
PRB3-203ENST00000539835 ERCC6L2Q5T890 1561 aa8.23□□□□□ -1.09
PRB3-203ENST00000539835 LHX8Q68G74 356 aa8.22□□□□□ -1.09
PRB3-203ENST00000539835 KIF13AQ9H1H9 1805 aa8.22□□□□□ -1.09
PRB3-203ENST00000539835 HECW2Q9P2P5 1572 aa8.21□□□□□ -1.1
PRB3-203ENST00000539835 TOPBP1Q92547 1522 aa8.2□□□□□ -1.1
PRB3-203ENST00000539835 PAK3O75914 559 aaPredicted RBP8.2□□□□□ -1.1
PRB3-203ENST00000539835 ZNF579Q8NAF0 562 aaKnown RBP8.2□□□□□ -1.1
PRB3-203ENST00000539835 DCBLD2Q96PD2 775 aa8.2□□□□□ -1.1
PRB3-203ENST00000539835 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
PRB3-203ENST00000539835 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
PRB3-203ENST00000539835 TARBP1Q13395 1621 aaKnown RBP8.18□□□□□ -1.1
PRB3-203ENST00000539835 SYNJ2O15056 1496 aa8.14□□□□□ -1.11
PRB3-203ENST00000539835 CHMP7Q8WUX9 453 aaPredicted RBP8.14□□□□□ -1.11
PRB3-203ENST00000539835 SYNJ1O43426 1573 aa8.14□□□□□ -1.11
PRB3-203ENST00000539835 GALR2O43603 387 aaPredicted RBP8.13□□□□□ -1.11
PRB3-203ENST00000539835 MNX1P50219 401 aaPredicted RBP8.13□□□□□ -1.11
PRB3-203ENST00000539835 WIZO95785 1651 aa8.13□□□□□ -1.11
PRB3-203ENST00000539835 TDRD9Q8NDG6 1382 aaKnown RBP8.12□□□□□ -1.11
PRB3-203ENST00000539835 FAM69CQ0P6D2 419 aa8.12□□□□□ -1.11
PRB3-203ENST00000539835 PROM2Q8N271 834 aa8.12□□□□□ -1.11
PRB3-203ENST00000539835 ADGRL1O94910 1474 aa8.12□□□□□ -1.11
PRB3-203ENST00000539835 SNAPC4Q5SXM2 1469 aa8.12□□□□□ -1.11
PRB3-203ENST00000539835 PHF12Q96QT6 1004 aa8.11□□□□□ -1.11
PRB3-203ENST00000539835 ABCC10Q5T3U5 1492 aa8.11□□□□□ -1.11
PRB3-203ENST00000539835 ABCC8Q09428 1581 aa8.1□□□□□ -1.11
PRB3-203ENST00000539835 RAD54L2Q9Y4B4 1467 aa8.08□□□□□ -1.12
PRB3-203ENST00000539835 KDM6BO15054 1643 aa8.08□□□□□ -1.12
PRB3-203ENST00000539835 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
PRB3-203ENST00000539835 DISP3Q9P2K9 1392 aa8.07□□□□□ -1.12
PRB3-203ENST00000539835 MAGI1Q96QZ7 1491 aaPredicted RBP8.06□□□□□ -1.12
PRB3-203ENST00000539835 DNMBPQ6XZF7 1577 aa8.06□□□□□ -1.12
PRB3-203ENST00000539835 PLEKHG5O94827 1062 aa8.06□□□□□ -1.12
PRB3-203ENST00000539835 MIER1Q8N108 512 aa8.05□□□□□ -1.12
PRB3-203ENST00000539835 TSPYL2Q9H2G4 693 aaPredicted RBP8.05□□□□□ -1.12
PRB3-203ENST00000539835 PRDM2Q13029 1718 aa8.04□□□□□ -1.12
PRB3-203ENST00000539835 SOGA1O94964 1423 aa8.03□□□□□ -1.12
PRB3-203ENST00000539835 DIP2BQ9P265 1576 aa8.02□□□□□ -1.13
PRB3-203ENST00000539835 CEP170Q5SW79 1584 aa8.01□□□□□ -1.13
PRB3-203ENST00000539835 GRIN2BQ13224 1484 aa8□□□□□ -1.13
PRB3-203ENST00000539835 MAPKBP1O60336 1514 aa7.99□□□□□ -1.13
PRB3-203ENST00000539835 MS4A3Q96HJ5 214 aa7.99□□□□□ -1.13
PRB3-203ENST00000539835 COL17A1Q9UMD9 1497 aaPredicted RBP7.99□□□□□ -1.13
PRB3-203ENST00000539835 WDR97A6NE52 1622 aa7.98□□□□□ -1.13
PRB3-203ENST00000539835 PLCD3Q8N3E9 789 aa7.97□□□□□ -1.13
PRB3-203ENST00000539835 TSPOAP1O95153 1857 aa7.96□□□□□ -1.13
PRB3-203ENST00000539835 PELP1Q8IZL8 1130 aaKnown RBP7.96□□□□□ -1.14
PRB3-203ENST00000539835 CCDC61Q9Y6R9 512 aa7.96□□□□□ -1.14
PRB3-203ENST00000539835 TOP2AP11388 1531 aaKnown RBP7.96□□□□□ -1.14
PRB3-203ENST00000539835 SHROOM2Q13796 1616 aa7.96□□□□□ -1.14
PRB3-203ENST00000539835 NUP160Q12769 1436 aa7.95□□□□□ -1.14
PRB3-203ENST00000539835 CCDC88BA6NC98 1476 aa7.94□□□□□ -1.14
PRB3-203ENST00000539835 ASTLQ6HA08 431 aaPredicted RBP7.94□□□□□ -1.14
PRB3-203ENST00000539835 POTEB2H3BUK9 544 aa7.93□□□□□ -1.14
PRB3-203ENST00000539835 ATMINO43313 823 aaPredicted RBP7.93□□□□□ -1.14
PRB3-203ENST00000539835 FKBP8Q14318 412 aa7.93□□□□□ -1.14
PRB3-203ENST00000539835 CERKQ8TCT0 537 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms