RNA–Protein interactions for RNA: ENST00000539835.1

PRB3-203, Transcript of proline rich protein BstNI subfamily 3, humanhuman

TSL 2

Gene PRB3, Length 476 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRB3-203ENST00000539835 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
PRB3-203ENST00000539835 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
PRB3-203ENST00000539835 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
PRB3-203ENST00000539835 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
PRB3-203ENST00000539835 FOXD1Q16676 465 aa12.96□□□□□ -0.33
PRB3-203ENST00000539835 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.44
PRB3-203ENST00000539835 MSH5O43196 834 aa12.17□□□□□ -0.46
PRB3-203ENST00000539835 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
PRB3-203ENST00000539835 PPP6R1Q9UPN7 881 aa12.08□□□□□ -0.48
PRB3-203ENST00000539835 ADRA2BP18089 450 aa12.06□□□□□ -0.48
PRB3-203ENST00000539835 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
PRB3-203ENST00000539835 MAPK8IP2Q13387 824 aaPredicted RBP11.09□□□□□ -0.63
PRB3-203ENST00000539835 SCAF1Q9H7N4 1312 aaKnown RBP11.08□□□□□ -0.64
PRB3-203ENST00000539835 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
PRB3-203ENST00000539835 PPP4R3CPQ6ZMV5 832 aa10.8□□□□□ -0.68
PRB3-203ENST00000539835 NISCHQ9Y2I1 1504 aa10.77□□□□□ -0.69
PRB3-203ENST00000539835 DNAJC5BQ9UF47 199 aa10.7□□□□□ -0.7
PRB3-203ENST00000539835 DCAF8L1A6NGE4 600 aa10.63□□□□□ -0.71
PRB3-203ENST00000539835 CNKSR2Q8WXI2 1034 aa10.61□□□□□ -0.71
PRB3-203ENST00000539835 HOXD11P31277 338 aaPredicted RBP10.58□□□□□ -0.72
PRB3-203ENST00000539835 ABCC9O60706 1549 aa10.58□□□□□ -0.72
PRB3-203ENST00000539835 RNF216Q9NWF9 866 aaPredicted RBP10.52□□□□□ -0.73
PRB3-203ENST00000539835 CACNB1Q02641 598 aaPredicted RBP10.49□□□□□ -0.73
PRB3-203ENST00000539835 NCBP3Q53F19 620 aaKnown RBP10.4□□□□□ -0.74
PRB3-203ENST00000539835 RNF39Q9H2S5 420 aa10.35□□□□□ -0.75
PRB3-203ENST00000539835 DNAJC5Q9H3Z4 198 aa10.24□□□□□ -0.77
PRB3-203ENST00000539835 C1QBPQ07021 282 aaKnown RBP10.23□□□□□ -0.77
PRB3-203ENST00000539835 NPM3O75607 178 aaKnown RBP10.21□□□□□ -0.77
PRB3-203ENST00000539835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.14□□□□□ -0.79
PRB3-203ENST00000539835 KCNA4P22459 653 aa9.97□□□□□ -0.81
PRB3-203ENST00000539835 U3KPZ7 1027 aaPredicted RBP9.87□□□□□ -0.83
PRB3-203ENST00000539835 CCDC180Q9P1Z9 1646 aa9.85□□□□□ -0.83
PRB3-203ENST00000539835 PABPN1Q86U42 306 aaKnown RBP eCLIP9.8□□□□□ -0.84
PRB3-203ENST00000539835 CAPN15O75808 1086 aa9.78□□□□□ -0.84
PRB3-203ENST00000539835 SPINK5Q9NQ38 1064 aaPredicted RBP9.76□□□□□ -0.85
PRB3-203ENST00000539835 SLC4A2P04920 1241 aa9.74□□□□□ -0.85
PRB3-203ENST00000539835 RB1CC1Q8TDY2 1594 aa9.71□□□□□ -0.85
PRB3-203ENST00000539835 DSG3P32926 999 aa9.69□□□□□ -0.86
PRB3-203ENST00000539835 APLP2Q06481 763 aa9.65□□□□□ -0.86
PRB3-203ENST00000539835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.62□□□□□ -0.87
PRB3-203ENST00000539835 HNRNPUL2Q1KMD3 747 aaKnown RBP9.62□□□□□ -0.87
PRB3-203ENST00000539835 TRHP20396 242 aaPredicted RBP9.61□□□□□ -0.87
PRB3-203ENST00000539835 CECR2Q9BXF3 1484 aa9.59□□□□□ -0.87
PRB3-203ENST00000539835 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
PRB3-203ENST00000539835 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
PRB3-203ENST00000539835 SAMD1Q6SPF0 538 aaPredicted RBP9.55□□□□□ -0.88
PRB3-203ENST00000539835 UNC13AQ9UPW8 1703 aa9.53□□□□□ -0.88
PRB3-203ENST00000539835 ABCB7O75027 752 aa9.53□□□□□ -0.88
PRB3-203ENST00000539835 NACADO15069 1562 aa9.52□□□□□ -0.89
PRB3-203ENST00000539835 CC2D2AQ9P2K1 1620 aa9.51□□□□□ -0.89
PRB3-203ENST00000539835 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
PRB3-203ENST00000539835 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
PRB3-203ENST00000539835 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
PRB3-203ENST00000539835 CUX2O14529 1486 aa9.37□□□□□ -0.91
PRB3-203ENST00000539835 POTEHQ6S545 545 aa9.36□□□□□ -0.91
PRB3-203ENST00000539835 POLA2Q14181 598 aa9.34□□□□□ -0.91
PRB3-203ENST00000539835 DCAF8L2P0C7V8 631 aa9.33□□□□□ -0.92
PRB3-203ENST00000539835 FOXD4L1Q9NU39 408 aa9.33□□□□□ -0.92
PRB3-203ENST00000539835 EIF4G1Q04637 1599 aaKnown RBP9.33□□□□□ -0.92
PRB3-203ENST00000539835 RBM42Q9BTD8 480 aaKnown RBP9.28□□□□□ -0.92
PRB3-203ENST00000539835 SHROOM4Q9ULL8 1493 aa9.28□□□□□ -0.92
PRB3-203ENST00000539835 MYO15BQ96JP2 1530 aa9.22□□□□□ -0.93
PRB3-203ENST00000539835 ATF5Q9Y2D1 282 aaPredicted RBP9.21□□□□□ -0.94
PRB3-203ENST00000539835 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
PRB3-203ENST00000539835 ZBTB22O15209 634 aa9.13□□□□□ -0.95
PRB3-203ENST00000539835 ERCC6Q03468 1493 aa9.1□□□□□ -0.95
PRB3-203ENST00000539835 CHRDL2Q6WN34 429 aa9.07□□□□□ -0.96
PRB3-203ENST00000539835 ATXN8OSP0DMR3 200 aa9.05□□□□□ -0.96
PRB3-203ENST00000539835 AKT1S1Q96B36 256 aa9.05□□□□□ -0.96
PRB3-203ENST00000539835 OSCARQ8IYS5 282 aa9.01□□□□□ -0.97
PRB3-203ENST00000539835 SCRIBQ14160 1630 aa9□□□□□ -0.97
PRB3-203ENST00000539835 REM2Q8IYK8 340 aaPredicted RBP8.96□□□□□ -0.98
PRB3-203ENST00000539835 NESP48681 1621 aa8.94□□□□□ -0.98
PRB3-203ENST00000539835 THOC2Q8NI27 1593 aaKnown RBP8.92□□□□□ -0.98
PRB3-203ENST00000539835 FBLN2P98095 1184 aa8.92□□□□□ -0.98
PRB3-203ENST00000539835 NCAPD3P42695 1498 aa8.88□□□□□ -0.99
PRB3-203ENST00000539835 DCAF1Q9Y4B6 1507 aa8.85□□□□□ -0.99
PRB3-203ENST00000539835 PITPNM1O00562 1244 aa8.85□□□□□ -0.99
PRB3-203ENST00000539835 SPDYE2BA6NHP3 402 aa8.84□□□□□ -0.99
PRB3-203ENST00000539835 SPDYE6P0CI01 402 aa8.84□□□□□ -0.99
PRB3-203ENST00000539835 SPDYE2Q495Y8 402 aa8.84□□□□□ -0.99
PRB3-203ENST00000539835 ILDR1Q86SU0 546 aaPredicted RBP8.84□□□□□ -0.99
PRB3-203ENST00000539835 PIP4P2Q8N4L2 257 aa8.84□□□□□ -0.99
PRB3-203ENST00000539835 MKRN4PQ13434 485 aaPredicted RBP8.79□□□□□ -1
PRB3-203ENST00000539835 RIMBP3CA6NJZ7 1639 aa8.79□□□□□ -1
PRB3-203ENST00000539835 RIMBP3BA6NNM3 1639 aa8.79□□□□□ -1
PRB3-203ENST00000539835 RIMBP3Q9UFD9 1639 aa8.79□□□□□ -1
PRB3-203ENST00000539835 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
PRB3-203ENST00000539835 BAZ1AQ9NRL2 1556 aaPredicted RBP8.78□□□□□ -1
PRB3-203ENST00000539835 ZCCHC6Q5VYS8 1495 aaKnown RBP8.77□□□□□ -1.01
PRB3-203ENST00000539835 SMARCA2P51531 1590 aa8.75□□□□□ -1.01
PRB3-203ENST00000539835 SP7Q8TDD2 431 aaPredicted RBP8.75□□□□□ -1.01
PRB3-203ENST00000539835 ZNF692Q9BU19 519 aaPredicted RBP8.75□□□□□ -1.01
PRB3-203ENST00000539835 HAX1O00165 279 aa8.74□□□□□ -1.01
PRB3-203ENST00000539835 ATAD2BQ9ULI0 1458 aa8.74□□□□□ -1.01
PRB3-203ENST00000539835 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
PRB3-203ENST00000539835 CYB5RLQ6IPT4 315 aa8.71□□□□□ -1.02
PRB3-203ENST00000539835 SPDYE1Q8NFV5 336 aaPredicted RBP8.71□□□□□ -1.02
PRB3-203ENST00000539835 CSRNP3Q8WYN3 585 aa8.71□□□□□ -1.02
PRB3-203ENST00000539835 KIF21AQ7Z4S6 1674 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms