RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 CHD1O14646 1710 aa12.45□□□□□ -0.42
GNE-205ENST00000539815 KIF27Q86VH2 1401 aa12.44□□□□□ -0.42
GNE-205ENST00000539815 GRIN2AQ12879 1464 aa12.44□□□□□ -0.42
GNE-205ENST00000539815 P3H3Q8IVL6 736 aa12.44□□□□□ -0.42
GNE-205ENST00000539815 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
GNE-205ENST00000539815 MLECQ14165 292 aa12.41□□□□□ -0.42
GNE-205ENST00000539815 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
GNE-205ENST00000539815 TNIKQ9UKE5 1360 aa12.35□□□□□ -0.43
GNE-205ENST00000539815 CUX1P39880 1505 aa12.35□□□□□ -0.43
GNE-205ENST00000539815 ABCA10Q8WWZ4 1543 aa12.35□□□□□ -0.43
GNE-205ENST00000539815 UBTFP17480 764 aaKnown RBP12.34□□□□□ -0.43
GNE-205ENST00000539815 PLEKHD1A6NEE1 506 aa12.34□□□□□ -0.43
GNE-205ENST00000539815 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
GNE-205ENST00000539815 TARBP1Q13395 1621 aaKnown RBP12.32□□□□□ -0.44
GNE-205ENST00000539815 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
GNE-205ENST00000539815 KDM4FA0A1W2PPD8 638 aa12.3□□□□□ -0.44
GNE-205ENST00000539815 PLB1Q6P1J6 1458 aa12.3□□□□□ -0.44
GNE-205ENST00000539815 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
GNE-205ENST00000539815 FBXO41Q8TF61 875 aa12.28□□□□□ -0.44
GNE-205ENST00000539815 TEX14Q8IWB6 1497 aa12.28□□□□□ -0.44
GNE-205ENST00000539815 KDM6BO15054 1643 aa12.27□□□□□ -0.44
GNE-205ENST00000539815 CEP170Q5SW79 1584 aa12.27□□□□□ -0.44
GNE-205ENST00000539815 NUP160Q12769 1436 aa12.27□□□□□ -0.45
GNE-205ENST00000539815 ABCC10Q5T3U5 1492 aa12.27□□□□□ -0.45
GNE-205ENST00000539815 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
GNE-205ENST00000539815 PRDM2Q13029 1718 aa12.25□□□□□ -0.45
GNE-205ENST00000539815 KIAA0586Q9BVV6 1533 aa12.24□□□□□ -0.45
GNE-205ENST00000539815 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
GNE-205ENST00000539815 ASXL2Q76L83 1435 aa12.22□□□□□ -0.45
GNE-205ENST00000539815 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
GNE-205ENST00000539815 DISP3Q9P2K9 1392 aa12.21□□□□□ -0.46
GNE-205ENST00000539815 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
GNE-205ENST00000539815 MYT1Q01538 1121 aa12.19□□□□□ -0.46
GNE-205ENST00000539815 ERICH3Q5RHP9 1530 aa12.19□□□□□ -0.46
GNE-205ENST00000539815 IGF1RP08069 1367 aa12.19□□□□□ -0.46
GNE-205ENST00000539815 POGZQ7Z3K3 1410 aa12.18□□□□□ -0.46
GNE-205ENST00000539815 PHF23Q9BUL5 403 aaPredicted RBP12.17□□□□□ -0.46
GNE-205ENST00000539815 HSPA2P54652 639 aa12.16□□□□□ -0.46
GNE-205ENST00000539815 RAPGEF3O95398 923 aa12.16□□□□□ -0.46
GNE-205ENST00000539815 TSPOAP1O95153 1857 aa12.15□□□□□ -0.47
GNE-205ENST00000539815 ZNF777Q9ULD5 760 aaPredicted RBP12.14□□□□□ -0.47
GNE-205ENST00000539815 ERCC6L2Q5T890 1561 aa12.14□□□□□ -0.47
GNE-205ENST00000539815 ADGRL1O94910 1474 aa12.14□□□□□ -0.47
GNE-205ENST00000539815 ADAMTS12P58397 1594 aa12.14□□□□□ -0.47
GNE-205ENST00000539815 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
GNE-205ENST00000539815 GOLGA3Q08378 1498 aa12.12□□□□□ -0.47
GNE-205ENST00000539815 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
GNE-205ENST00000539815 EFCAB2Q5VUJ9 269 aa12.11□□□□□ -0.47
GNE-205ENST00000539815 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
GNE-205ENST00000539815 ABCC2Q92887 1545 aa12.1□□□□□ -0.47
GNE-205ENST00000539815 LMTK3Q96Q04 1460 aa12.07□□□□□ -0.48
GNE-205ENST00000539815 RAPGEF2Q9Y4G8 1499 aa12.07□□□□□ -0.48
GNE-205ENST00000539815 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
GNE-205ENST00000539815 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
GNE-205ENST00000539815 BCANQ96GW7 911 aa12.04□□□□□ -0.48
GNE-205ENST00000539815 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
GNE-205ENST00000539815 UBAP1LF5GYI3 381 aa12.04□□□□□ -0.48
GNE-205ENST00000539815 PHLDB1Q86UU1 1377 aa12.04□□□□□ -0.48
GNE-205ENST00000539815 PRKCSHP14314 528 aaPredicted RBP12.03□□□□□ -0.48
GNE-205ENST00000539815 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
GNE-205ENST00000539815 APLP2Q06481 763 aa12.02□□□□□ -0.48
GNE-205ENST00000539815 STAG3Q9UJ98 1225 aa12□□□□□ -0.49
GNE-205ENST00000539815 WDR7Q9Y4E6 1490 aa12□□□□□ -0.49
GNE-205ENST00000539815 PIP4K2BP78356 416 aa11.98□□□□□ -0.49
GNE-205ENST00000539815 IQGAP2Q13576 1575 aa11.98□□□□□ -0.49
GNE-205ENST00000539815 AKNAQ7Z591 1439 aa11.98□□□□□ -0.49
GNE-205ENST00000539815 DIP2BQ9P265 1576 aa11.96□□□□□ -0.49
GNE-205ENST00000539815 GGT6Q6P531 493 aa11.96□□□□□ -0.5
GNE-205ENST00000539815 CEBPAP49715 358 aaPredicted RBP11.95□□□□□ -0.5
GNE-205ENST00000539815 EPRSP07814 1512 aaKnown RBP11.95□□□□□ -0.5
GNE-205ENST00000539815 DENND4BO75064 1496 aaPredicted RBP11.93□□□□□ -0.5
GNE-205ENST00000539815 TOM1O60784 492 aa11.92□□□□□ -0.5
GNE-205ENST00000539815 CUL7Q14999 1698 aa11.92□□□□□ -0.5
GNE-205ENST00000539815 SOCS7O14512 581 aa11.9□□□□□ -0.5
GNE-205ENST00000539815 CLIP1P30622 1438 aa11.89□□□□□ -0.51
GNE-205ENST00000539815 RUSC2Q8N2Y8 1516 aa11.88□□□□□ -0.51
GNE-205ENST00000539815 UHRF1BP1LA0JNW5 1464 aa11.88□□□□□ -0.51
GNE-205ENST00000539815 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
GNE-205ENST00000539815 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
GNE-205ENST00000539815 ADCY10Q96PN6 1610 aa11.87□□□□□ -0.51
GNE-205ENST00000539815 FANCAO15360 1455 aa11.87□□□□□ -0.51
GNE-205ENST00000539815 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
GNE-205ENST00000539815 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
GNE-205ENST00000539815 UHRF1BP1Q6BDS2 1440 aa11.85□□□□□ -0.51
GNE-205ENST00000539815 CFDP1Q9UEE9 299 aaPredicted RBP11.85□□□□□ -0.51
GNE-205ENST00000539815 TSPY4P0CV99 314 aa11.85□□□□□ -0.51
GNE-205ENST00000539815 TSPY10P0CW01 314 aa11.85□□□□□ -0.51
GNE-205ENST00000539815 SHROOM2Q13796 1616 aa11.84□□□□□ -0.51
GNE-205ENST00000539815 AFAP1Q8N556 730 aa11.84□□□□□ -0.51
GNE-205ENST00000539815 KDM5BQ9UGL1 1544 aa11.84□□□□□ -0.51
GNE-205ENST00000539815 SPAG9O60271 1321 aaKnown RBP11.84□□□□□ -0.51
GNE-205ENST00000539815 PTPRMP28827 1452 aa11.83□□□□□ -0.52
GNE-205ENST00000539815 PPP6R1Q9UPN7 881 aa11.83□□□□□ -0.52
GNE-205ENST00000539815 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
GNE-205ENST00000539815 COL17A1Q9UMD9 1497 aaPredicted RBP11.81□□□□□ -0.52
GNE-205ENST00000539815 MAGI3Q5TCQ9 1506 aa11.8□□□□□ -0.52
GNE-205ENST00000539815 KIF13AQ9H1H9 1805 aa11.79□□□□□ -0.52
GNE-205ENST00000539815 FHOD3Q2V2M9 1422 aa11.79□□□□□ -0.52
GNE-205ENST00000539815 GLI2P10070 1586 aa11.78□□□□□ -0.52
GNE-205ENST00000539815 NEO1Q92859 1461 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms