RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
LDHA-217ENST00000539814 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
LDHA-217ENST00000539814 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
LDHA-217ENST00000539814 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
LDHA-217ENST00000539814 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
LDHA-217ENST00000539814 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
LDHA-217ENST00000539814 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
LDHA-217ENST00000539814 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
LDHA-217ENST00000539814 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
LDHA-217ENST00000539814 ABCC8Q09428 1581 aa13.57□□□□□ -0.24
LDHA-217ENST00000539814 BCANQ96GW7 911 aa13.56□□□□□ -0.24
LDHA-217ENST00000539814 WDR62O43379 1518 aa13.54□□□□□ -0.24
LDHA-217ENST00000539814 CUX1P39880 1505 aa13.5□□□□□ -0.25
LDHA-217ENST00000539814 TOPBP1Q92547 1522 aa13.5□□□□□ -0.25
LDHA-217ENST00000539814 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
LDHA-217ENST00000539814 PROM2Q8N271 834 aa13.49□□□□□ -0.25
LDHA-217ENST00000539814 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
LDHA-217ENST00000539814 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
LDHA-217ENST00000539814 PRKCSHP14314 528 aaPredicted RBP13.47□□□□□ -0.25
LDHA-217ENST00000539814 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
LDHA-217ENST00000539814 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
LDHA-217ENST00000539814 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
LDHA-217ENST00000539814 WRNQ14191 1432 aaPredicted RBP eCLIP13.45□□□□□ -0.26
LDHA-217ENST00000539814 CUX2O14529 1486 aa13.43□□□□□ -0.26
LDHA-217ENST00000539814 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
LDHA-217ENST00000539814 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
LDHA-217ENST00000539814 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
LDHA-217ENST00000539814 BIVM-ERCC5R4GMW8 1640 aa13.41□□□□□ -0.26
LDHA-217ENST00000539814 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
LDHA-217ENST00000539814 POLA1P09884 1462 aaPredicted RBP13.4□□□□□ -0.26
LDHA-217ENST00000539814 PKD2Q13563 968 aa13.39□□□□□ -0.27
LDHA-217ENST00000539814 RAD54L2Q9Y4B4 1467 aa13.38□□□□□ -0.27
LDHA-217ENST00000539814 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
LDHA-217ENST00000539814 REM2Q8IYK8 340 aaPredicted RBP13.34□□□□□ -0.27
LDHA-217ENST00000539814 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
LDHA-217ENST00000539814 IFT140Q96RY7 1462 aa13.33□□□□□ -0.28
LDHA-217ENST00000539814 SOGA1O94964 1423 aa13.32□□□□□ -0.28
LDHA-217ENST00000539814 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
LDHA-217ENST00000539814 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
LDHA-217ENST00000539814 TRIM41Q8WV44 630 aa13.27□□□□□ -0.29
LDHA-217ENST00000539814 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.29
LDHA-217ENST00000539814 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.297e-13■■■■□ 22.4
LDHA-217ENST00000539814 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
LDHA-217ENST00000539814 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
LDHA-217ENST00000539814 ABCA5Q8WWZ7 1642 aa13.22□□□□□ -0.29
LDHA-217ENST00000539814 TPRNQ4KMQ1 711 aa13.22□□□□□ -0.29
LDHA-217ENST00000539814 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.29
LDHA-217ENST00000539814 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
LDHA-217ENST00000539814 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
LDHA-217ENST00000539814 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
LDHA-217ENST00000539814 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
LDHA-217ENST00000539814 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
LDHA-217ENST00000539814 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
LDHA-217ENST00000539814 PAXIP1Q6ZW49 1069 aaPredicted RBP13.16□□□□□ -0.3
LDHA-217ENST00000539814 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.3
LDHA-217ENST00000539814 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
LDHA-217ENST00000539814 GRIN2BQ13224 1484 aa13.13□□□□□ -0.31
LDHA-217ENST00000539814 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
LDHA-217ENST00000539814 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
LDHA-217ENST00000539814 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
LDHA-217ENST00000539814 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
LDHA-217ENST00000539814 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
LDHA-217ENST00000539814 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
LDHA-217ENST00000539814 FAM9AQ8IZU1 332 aaPredicted RBP13.1□□□□□ -0.31
LDHA-217ENST00000539814 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
LDHA-217ENST00000539814 CHD1O14646 1710 aa13.1□□□□□ -0.31
LDHA-217ENST00000539814 ADAMTS12P58397 1594 aa13.09□□□□□ -0.31
LDHA-217ENST00000539814 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
LDHA-217ENST00000539814 MAGI1Q96QZ7 1491 aaPredicted RBP13.06□□□□□ -0.32
LDHA-217ENST00000539814 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
LDHA-217ENST00000539814 IGF1RP08069 1367 aa13.06□□□□□ -0.32
LDHA-217ENST00000539814 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
LDHA-217ENST00000539814 CUL7Q14999 1698 aa13.02□□□□□ -0.33
LDHA-217ENST00000539814 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
LDHA-217ENST00000539814 PRR29P0C7W0 189 aa13□□□□□ -0.33
LDHA-217ENST00000539814 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
LDHA-217ENST00000539814 GRIN2AQ12879 1464 aa12.99□□□□□ -0.33
LDHA-217ENST00000539814 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
LDHA-217ENST00000539814 RGL2O15211 777 aa12.98□□□□□ -0.33
LDHA-217ENST00000539814 SPRYD3Q8NCJ5 442 aa12.98□□□□□ -0.33
LDHA-217ENST00000539814 CEP170Q5SW79 1584 aa12.97□□□□□ -0.33
LDHA-217ENST00000539814 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
LDHA-217ENST00000539814 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
LDHA-217ENST00000539814 EEA1Q15075 1411 aa12.96□□□□□ -0.34
LDHA-217ENST00000539814 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
LDHA-217ENST00000539814 PRXQ9BXM0 1461 aa12.94□□□□□ -0.34
LDHA-217ENST00000539814 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
LDHA-217ENST00000539814 NUP160Q12769 1436 aa12.9□□□□□ -0.34
LDHA-217ENST00000539814 CLASP1Q7Z460 1538 aa12.9□□□□□ -0.34
LDHA-217ENST00000539814 KIF21BO75037 1637 aa12.89□□□□□ -0.35
LDHA-217ENST00000539814 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
LDHA-217ENST00000539814 CTTNBP2Q8WZ74 1663 aa12.86□□□□□ -0.35
LDHA-217ENST00000539814 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
LDHA-217ENST00000539814 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
LDHA-217ENST00000539814 NBR1Q14596 966 aa12.84□□□□□ -0.35
LDHA-217ENST00000539814 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
LDHA-217ENST00000539814 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
LDHA-217ENST00000539814 POTEHQ6S545 545 aa12.83□□□□□ -0.36
LDHA-217ENST00000539814 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
LDHA-217ENST00000539814 ERCC6L2Q5T890 1561 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 277.3 ms