RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 PBRM1Q86U86 1689 aa9.8□□□□□ -0.84
PDZRN4-203ENST00000539469 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
PDZRN4-203ENST00000539469 KIF27Q86VH2 1401 aa9.79□□□□□ -0.84
PDZRN4-203ENST00000539469 HRCP23327 699 aa9.79□□□□□ -0.84
PDZRN4-203ENST00000539469 KIF21BO75037 1637 aa9.79□□□□□ -0.84
PDZRN4-203ENST00000539469 EIF4G3O43432 1585 aaKnown RBP9.78□□□□□ -0.84
PDZRN4-203ENST00000539469 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
PDZRN4-203ENST00000539469 IFT140Q96RY7 1462 aa9.78□□□□□ -0.84
PDZRN4-203ENST00000539469 TDRD9Q8NDG6 1382 aaKnown RBP9.76□□□□□ -0.85
PDZRN4-203ENST00000539469 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
PDZRN4-203ENST00000539469 AQRO60306 1485 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDZRN4-203ENST00000539469 GAPVD1Q14C86 1478 aa9.74□□□□□ -0.85
PDZRN4-203ENST00000539469 PRXQ9BXM0 1461 aa9.74□□□□□ -0.85
PDZRN4-203ENST00000539469 RAPGEF2Q9Y4G8 1499 aa9.74□□□□□ -0.85
PDZRN4-203ENST00000539469 PCGF6Q9BYE7 350 aa9.74□□□□□ -0.85
PDZRN4-203ENST00000539469 CUL7Q14999 1698 aa9.73□□□□□ -0.85
PDZRN4-203ENST00000539469 IGF1RP08069 1367 aa9.73□□□□□ -0.85
PDZRN4-203ENST00000539469 ERICH3Q5RHP9 1530 aa9.72□□□□□ -0.85
PDZRN4-203ENST00000539469 GTF3C3Q9Y5Q9 886 aa9.72□□□□□ -0.85
PDZRN4-203ENST00000539469 GOLGA3Q08378 1498 aa9.71□□□□□ -0.85
PDZRN4-203ENST00000539469 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
PDZRN4-203ENST00000539469 ADAMTS12P58397 1594 aa9.7□□□□□ -0.86
PDZRN4-203ENST00000539469 GRIN2BQ13224 1484 aa9.67□□□□□ -0.86
PDZRN4-203ENST00000539469 CARMIL1Q5VZK9 1371 aa9.67□□□□□ -0.86
PDZRN4-203ENST00000539469 FBLN2P98095 1184 aa9.67□□□□□ -0.86
PDZRN4-203ENST00000539469 KDM2AQ9Y2K7 1162 aa9.67□□□□□ -0.86
PDZRN4-203ENST00000539469 SNAPC4Q5SXM2 1469 aa9.67□□□□□ -0.86
PDZRN4-203ENST00000539469 CTTNBP2Q8WZ74 1663 aa9.66□□□□□ -0.86
PDZRN4-203ENST00000539469 TNIKQ9UKE5 1360 aa9.63□□□□□ -0.87
PDZRN4-203ENST00000539469 FHAD1B1AJZ9 1412 aa9.62□□□□□ -0.87
PDZRN4-203ENST00000539469 CHD1O14646 1710 aa9.62□□□□□ -0.87
PDZRN4-203ENST00000539469 MAGI1Q96QZ7 1491 aaPredicted RBP9.61□□□□□ -0.87
PDZRN4-203ENST00000539469 UBTFP17480 764 aaKnown RBP9.61□□□□□ -0.87
PDZRN4-203ENST00000539469 CEP162Q5TB80 1403 aa9.61□□□□□ -0.87
PDZRN4-203ENST00000539469 PODXL2Q9NZ53 605 aa9.61□□□□□ -0.87
PDZRN4-203ENST00000539469 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
PDZRN4-203ENST00000539469 RANGAP1P46060 587 aaPredicted RBP9.59□□□□□ -0.87
PDZRN4-203ENST00000539469 SYNJ2O15056 1496 aa9.58□□□□□ -0.88
PDZRN4-203ENST00000539469 GRIN2AQ12879 1464 aa9.58□□□□□ -0.88
PDZRN4-203ENST00000539469 CEP170Q5SW79 1584 aa9.58□□□□□ -0.88
PDZRN4-203ENST00000539469 CLIP1P30622 1438 aa9.54□□□□□ -0.88
PDZRN4-203ENST00000539469 IQGAP2Q13576 1575 aa9.54□□□□□ -0.88
PDZRN4-203ENST00000539469 ARHGAP35Q9NRY4 1499 aa9.53□□□□□ -0.88
PDZRN4-203ENST00000539469 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
PDZRN4-203ENST00000539469 SAMD9Q5K651 1589 aa9.52□□□□□ -0.88
PDZRN4-203ENST00000539469 NUP160Q12769 1436 aa9.51□□□□□ -0.89
PDZRN4-203ENST00000539469 KLHL34Q8N239 644 aa9.51□□□□□ -0.89
PDZRN4-203ENST00000539469 CHMP7Q8WUX9 453 aaPredicted RBP9.5□□□□□ -0.89
PDZRN4-203ENST00000539469 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
PDZRN4-203ENST00000539469 KIAA0586Q9BVV6 1533 aa9.49□□□□□ -0.89
PDZRN4-203ENST00000539469 EFCAB5A4FU69 1503 aa9.48□□□□□ -0.89
PDZRN4-203ENST00000539469 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
PDZRN4-203ENST00000539469 UGGT2Q9NYU1 1516 aa9.47□□□□□ -0.89
PDZRN4-203ENST00000539469 KIAA0556O60303 1618 aa9.46□□□□□ -0.89
PDZRN4-203ENST00000539469 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.89
PDZRN4-203ENST00000539469 FHOD3Q2V2M9 1422 aa9.46□□□□□ -0.9
PDZRN4-203ENST00000539469 SHROOM2Q13796 1616 aa9.45□□□□□ -0.9
PDZRN4-203ENST00000539469 DISP1Q96F81 1524 aa9.45□□□□□ -0.9
PDZRN4-203ENST00000539469 VPS8Q8N3P4 1428 aa9.45□□□□□ -0.9
PDZRN4-203ENST00000539469 LRRIQ1Q96JM4 1722 aa9.45□□□□□ -0.9
PDZRN4-203ENST00000539469 PCF11O94913 1555 aaKnown RBP9.44□□□□□ -0.9
PDZRN4-203ENST00000539469 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
PDZRN4-203ENST00000539469 ERCC6L2Q5T890 1561 aa9.42□□□□□ -0.9
PDZRN4-203ENST00000539469 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
PDZRN4-203ENST00000539469 CFAP44Q96MT7 982 aa9.4□□□□□ -0.9
PDZRN4-203ENST00000539469 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
PDZRN4-203ENST00000539469 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
PDZRN4-203ENST00000539469 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
PDZRN4-203ENST00000539469 JPH4Q96JJ6 628 aa9.37□□□□□ -0.91
PDZRN4-203ENST00000539469 PRG4Q92954 1404 aaPredicted RBP9.37□□□□□ -0.91
PDZRN4-203ENST00000539469 FYCO1Q9BQS8 1478 aa9.36□□□□□ -0.91
PDZRN4-203ENST00000539469 MSH5O43196 834 aa9.36□□□□□ -0.91
PDZRN4-203ENST00000539469 FMN1Q68DA7 1419 aa9.35□□□□□ -0.91
PDZRN4-203ENST00000539469 TIAM1Q13009 1591 aa9.35□□□□□ -0.91
PDZRN4-203ENST00000539469 RAPGEF6Q8TEU7 1601 aa9.35□□□□□ -0.91
PDZRN4-203ENST00000539469 CASKIN1Q8WXD9 1431 aa9.35□□□□□ -0.91
PDZRN4-203ENST00000539469 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.91
PDZRN4-203ENST00000539469 HECW1Q76N89 1606 aa9.34□□□□□ -0.91
PDZRN4-203ENST00000539469 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
PDZRN4-203ENST00000539469 TTBK1Q5TCY1 1321 aaPredicted RBP9.32□□□□□ -0.92
PDZRN4-203ENST00000539469 PLB1Q6P1J6 1458 aa9.32□□□□□ -0.92
PDZRN4-203ENST00000539469 CNKSR2Q8WXI2 1034 aa9.32□□□□□ -0.92
PDZRN4-203ENST00000539469 ABCA8O94911 1581 aa9.32□□□□□ -0.92
PDZRN4-203ENST00000539469 CDK13Q14004 1512 aaKnown RBP9.31□□□□□ -0.92
PDZRN4-203ENST00000539469 TSHZ2Q9NRE2 1034 aa9.31□□□□□ -0.92
PDZRN4-203ENST00000539469 NUP153P49790 1475 aaKnown RBP9.31□□□□□ -0.92
PDZRN4-203ENST00000539469 MAP3K1Q13233 1512 aa9.3□□□□□ -0.92
PDZRN4-203ENST00000539469 OSCARQ8IYS5 282 aa9.3□□□□□ -0.92
PDZRN4-203ENST00000539469 MAGI3Q5TCQ9 1506 aa9.3□□□□□ -0.92
PDZRN4-203ENST00000539469 KANK4Q5T7N3 995 aaPredicted RBP9.29□□□□□ -0.92
PDZRN4-203ENST00000539469 NPM2Q86SE8 214 aaKnown RBP9.29□□□□□ -0.92
PDZRN4-203ENST00000539469 EPRSP07814 1512 aaKnown RBP9.29□□□□□ -0.92
PDZRN4-203ENST00000539469 ATP1B4Q9UN42 357 aaPredicted RBP9.28□□□□□ -0.92
PDZRN4-203ENST00000539469 LRRC9Q6ZRR7 1453 aa9.27□□□□□ -0.93
PDZRN4-203ENST00000539469 CCDC18Q5T9S5 1454 aa9.27□□□□□ -0.93
PDZRN4-203ENST00000539469 PTPRGP23470 1445 aa9.26□□□□□ -0.93
PDZRN4-203ENST00000539469 TRIM26Q12899 539 aaPredicted RBP9.26□□□□□ -0.93
PDZRN4-203ENST00000539469 ARID3CA6NKF2 412 aa9.26□□□□□ -0.93
PDZRN4-203ENST00000539469 ADCY10Q96PN6 1610 aa9.25□□□□□ -0.93
PDZRN4-203ENST00000539469 NBR1Q14596 966 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms