RNA–Protein interactions for RNA: ENST00000538974.5

RAPGEF4-214, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-214ENST00000538974 SALL2Q9Y467 1007 aaPredicted RBP9.78□□□□□ -0.84
RAPGEF4-214ENST00000538974 FOXD1Q16676 465 aa9.78□□□□□ -0.84
RAPGEF4-214ENST00000538974 RAB3GAP2Q9H2M9 1393 aa9.77□□□□□ -0.84
RAPGEF4-214ENST00000538974 SLC4A1APQ9BWU0 796 aaKnown RBP9.77□□□□□ -0.85
RAPGEF4-214ENST00000538974 KDM2AQ9Y2K7 1162 aa9.77□□□□□ -0.85
RAPGEF4-214ENST00000538974 FHOD3Q2V2M9 1422 aa9.76□□□□□ -0.85
RAPGEF4-214ENST00000538974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.75□□□□□ -0.85
RAPGEF4-214ENST00000538974 CHMP7Q8WUX9 453 aaPredicted RBP9.74□□□□□ -0.85
RAPGEF4-214ENST00000538974 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
RAPGEF4-214ENST00000538974 CDK11AQ9UQ88 783 aaPredicted RBP9.73□□□□□ -0.85
RAPGEF4-214ENST00000538974 EIF4G1Q04637 1599 aaKnown RBP9.72□□□□□ -0.85
RAPGEF4-214ENST00000538974 CADPSQ9ULU8 1353 aa9.72□□□□□ -0.85
RAPGEF4-214ENST00000538974 SUPT16HQ9Y5B9 1047 aaKnown RBP9.71□□□□□ -0.86
RAPGEF4-214ENST00000538974 KIF21BO75037 1637 aa9.71□□□□□ -0.86
RAPGEF4-214ENST00000538974 MRS2Q9HD23 443 aa9.7□□□□□ -0.86
RAPGEF4-214ENST00000538974 SENP3Q9H4L4 574 aaPredicted RBP9.7□□□□□ -0.86
RAPGEF4-214ENST00000538974 SETD5Q9C0A6 1442 aa9.69□□□□□ -0.86
RAPGEF4-214ENST00000538974 ARAP1Q96P48 1450 aa9.68□□□□□ -0.86
RAPGEF4-214ENST00000538974 IGF1RP08069 1367 aa9.68□□□□□ -0.86
RAPGEF4-214ENST00000538974 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
RAPGEF4-214ENST00000538974 RAD54L2Q9Y4B4 1467 aa9.68□□□□□ -0.86
RAPGEF4-214ENST00000538974 FHAD1B1AJZ9 1412 aa9.68□□□□□ -0.86
RAPGEF4-214ENST00000538974 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
RAPGEF4-214ENST00000538974 RGL3Q3MIN7 710 aa9.67□□□□□ -0.86
RAPGEF4-214ENST00000538974 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
RAPGEF4-214ENST00000538974 CFDP1Q9UEE9 299 aaPredicted RBP9.65□□□□□ -0.86
RAPGEF4-214ENST00000538974 DNAJC5BQ9UF47 199 aa9.65□□□□□ -0.86
RAPGEF4-214ENST00000538974 FGD5Q6ZNL6 1462 aa9.65□□□□□ -0.87
RAPGEF4-214ENST00000538974 ARHGAP35Q9NRY4 1499 aa9.64□□□□□ -0.87
RAPGEF4-214ENST00000538974 PHLDB1Q86UU1 1377 aa9.63□□□□□ -0.87
RAPGEF4-214ENST00000538974 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
RAPGEF4-214ENST00000538974 TSPY4P0CV99 314 aa9.63□□□□□ -0.87
RAPGEF4-214ENST00000538974 TSPY10P0CW01 314 aa9.63□□□□□ -0.87
RAPGEF4-214ENST00000538974 PPP1R15AO75807 674 aaPredicted RBP9.61□□□□□ -0.87
RAPGEF4-214ENST00000538974 HSPA5P11021 654 aaKnown RBP9.61□□□□□ -0.87
RAPGEF4-214ENST00000538974 MYT1Q01538 1121 aa9.61□□□□□ -0.87
RAPGEF4-214ENST00000538974 TMC1Q8TDI8 760 aa9.61□□□□□ -0.87
RAPGEF4-214ENST00000538974 NESP48681 1621 aa9.61□□□□□ -0.87
RAPGEF4-214ENST00000538974 CUX1P39880 1505 aa9.6□□□□□ -0.87
RAPGEF4-214ENST00000538974 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
RAPGEF4-214ENST00000538974 NPM2Q86SE8 214 aaKnown RBP9.6□□□□□ -0.87
RAPGEF4-214ENST00000538974 UNC13AQ9UPW8 1703 aa9.59□□□□□ -0.87
RAPGEF4-214ENST00000538974 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
RAPGEF4-214ENST00000538974 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
RAPGEF4-214ENST00000538974 PRXQ9BXM0 1461 aa9.58□□□□□ -0.88
RAPGEF4-214ENST00000538974 BCL11AQ9H165 835 aa9.57□□□□□ -0.88
RAPGEF4-214ENST00000538974 L3MBTL2Q969R5 705 aa9.56□□□□□ -0.88
RAPGEF4-214ENST00000538974 MPHOSPH9Q99550 1183 aa9.56□□□□□ -0.88
RAPGEF4-214ENST00000538974 CFTRP13569 1480 aa9.55□□□□□ -0.88
RAPGEF4-214ENST00000538974 TOP2BQ02880 1626 aa9.55□□□□□ -0.88
RAPGEF4-214ENST00000538974 ZNF644Q9H582 1327 aaPredicted RBP9.55□□□□□ -0.88
RAPGEF4-214ENST00000538974 FMN1Q68DA7 1419 aa9.55□□□□□ -0.88
RAPGEF4-214ENST00000538974 CARD11Q9BXL7 1154 aa9.55□□□□□ -0.88
RAPGEF4-214ENST00000538974 ERCC6Q03468 1493 aa9.55□□□□□ -0.88
RAPGEF4-214ENST00000538974 B4GALNT3Q6L9W6 998 aa9.54□□□□□ -0.88
RAPGEF4-214ENST00000538974 PKD2Q13563 968 aa9.53□□□□□ -0.88
RAPGEF4-214ENST00000538974 DAXXQ9UER7 740 aaPredicted RBP9.53□□□□□ -0.88
RAPGEF4-214ENST00000538974 DCAF11Q8TEB1 546 aa9.53□□□□□ -0.88
RAPGEF4-214ENST00000538974 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
RAPGEF4-214ENST00000538974 PDS5BQ9NTI5 1447 aa9.52□□□□□ -0.88
RAPGEF4-214ENST00000538974 LRRC9Q6ZRR7 1453 aa9.52□□□□□ -0.89
RAPGEF4-214ENST00000538974 AQRO60306 1485 aaKnown RBP eCLIP9.5□□□□□ -0.89
RAPGEF4-214ENST00000538974 NBR1Q14596 966 aa9.5□□□□□ -0.89
RAPGEF4-214ENST00000538974 TSHZ2Q9NRE2 1034 aa9.5□□□□□ -0.89
RAPGEF4-214ENST00000538974 HNRNPMP52272 730 aaKnown RBP eCLIP9.49□□□□□ -0.89
RAPGEF4-214ENST00000538974 CCDC18Q5T9S5 1454 aa9.49□□□□□ -0.89
RAPGEF4-214ENST00000538974 RRBP1Q9P2E9 1410 aaKnown RBP9.48□□□□□ -0.89
RAPGEF4-214ENST00000538974 CC2D1BQ5T0F9 858 aaKnown RBP9.48□□□□□ -0.89
RAPGEF4-214ENST00000538974 ERICH3Q5RHP9 1530 aa9.48□□□□□ -0.89
RAPGEF4-214ENST00000538974 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
RAPGEF4-214ENST00000538974 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
RAPGEF4-214ENST00000538974 GAPVD1Q14C86 1478 aa9.47□□□□□ -0.89
RAPGEF4-214ENST00000538974 FGD6Q6ZV73 1430 aa9.47□□□□□ -0.89
RAPGEF4-214ENST00000538974 PLPPR3Q6T4P5 718 aa9.46□□□□□ -0.89
RAPGEF4-214ENST00000538974 CCER2I3L3R5 266 aa9.46□□□□□ -0.9
RAPGEF4-214ENST00000538974 CANXP27824 592 aaKnown RBP9.46□□□□□ -0.9
RAPGEF4-214ENST00000538974 POLA1P09884 1462 aaPredicted RBP9.45□□□□□ -0.9
RAPGEF4-214ENST00000538974 NUP155O75694 1391 aa9.44□□□□□ -0.9
RAPGEF4-214ENST00000538974 CC2D2AQ9P2K1 1620 aa9.44□□□□□ -0.9
RAPGEF4-214ENST00000538974 RBM19Q9Y4C8 960 aaKnown RBP9.44□□□□□ -0.9
RAPGEF4-214ENST00000538974 JPH4Q96JJ6 628 aa9.44□□□□□ -0.9
RAPGEF4-214ENST00000538974 ANP32AP39687 249 aaKnown RBP9.43□□□□□ -0.9
RAPGEF4-214ENST00000538974 TNNT2P45379 298 aaPredicted RBP9.42□□□□□ -0.9
RAPGEF4-214ENST00000538974 HMGXB3Q12766 1538 aa9.42□□□□□ -0.9
RAPGEF4-214ENST00000538974 WDR97A6NE52 1622 aa9.42□□□□□ -0.9
RAPGEF4-214ENST00000538974 PEG3Q9GZU2 1588 aa9.42□□□□□ -0.9
RAPGEF4-214ENST00000538974 TOPBP1Q92547 1522 aa9.42□□□□□ -0.9
RAPGEF4-214ENST00000538974 NCOA2Q15596 1464 aa9.41□□□□□ -0.9
RAPGEF4-214ENST00000538974 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
RAPGEF4-214ENST00000538974 CCDC184Q52MB2 194 aa9.4□□□□□ -0.9
RAPGEF4-214ENST00000538974 TIAM1Q13009 1591 aa9.4□□□□□ -0.9
RAPGEF4-214ENST00000538974 NEUROD2Q15784 382 aa9.4□□□□□ -0.9
RAPGEF4-214ENST00000538974 MYOM3Q5VTT5 1437 aa9.4□□□□□ -0.9
RAPGEF4-214ENST00000538974 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.91
RAPGEF4-214ENST00000538974 WASHC2AQ641Q2 1341 aa9.4□□□□□ -0.91
RAPGEF4-214ENST00000538974 ANP32EQ9BTT0 268 aa9.39□□□□□ -0.91
RAPGEF4-214ENST00000538974 ST20-MTHFSA0A0A6YYL1 179 aa9.38□□□□□ -0.91
RAPGEF4-214ENST00000538974 PRKRIP1Q9H875 184 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF4-214ENST00000538974 PPP4R2Q9NY27 417 aa9.38□□□□□ -0.91
RAPGEF4-214ENST00000538974 NPM1P06748 294 aaKnown RBP eCLIP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms