RNA–Protein interactions for RNA: ENST00000538422.2

LRCH2-202, Transcript of leucine rich repeats and calponin homology domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH2, Length 4,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH2-202ENST00000538422 ZNF316A6NFI3 1004 aaPredicted RBP25.04■■□□□ 1.6
LRCH2-202ENST00000538422 CC2D2AQ9P2K1 1620 aa25.03■■□□□ 1.6
LRCH2-202ENST00000538422 RAPGEF2Q9Y4G8 1499 aa25.02■■□□□ 1.6
LRCH2-202ENST00000538422 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
LRCH2-202ENST00000538422 VPS8Q8N3P4 1428 aa24.96■■□□□ 1.59
LRCH2-202ENST00000538422 ANP32CO43423 234 aa24.96■■□□□ 1.59
LRCH2-202ENST00000538422 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
LRCH2-202ENST00000538422 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
LRCH2-202ENST00000538422 CCNB3Q8WWL7 1395 aa24.92■■□□□ 1.58
LRCH2-202ENST00000538422 CFTRP13569 1480 aa24.9■■□□□ 1.58
LRCH2-202ENST00000538422 FMN1Q68DA7 1419 aa24.9■■□□□ 1.58
LRCH2-202ENST00000538422 ACIN1Q9UKV3 1341 aaKnown RBP24.89■■□□□ 1.58
LRCH2-202ENST00000538422 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
LRCH2-202ENST00000538422 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
LRCH2-202ENST00000538422 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
LRCH2-202ENST00000538422 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
LRCH2-202ENST00000538422 NESP48681 1621 aa24.8■■□□□ 1.56
LRCH2-202ENST00000538422 IGF1RP08069 1367 aa24.77■■□□□ 1.56
LRCH2-202ENST00000538422 KDM2AQ9Y2K7 1162 aa24.77■■□□□ 1.56
LRCH2-202ENST00000538422 FHOD3Q2V2M9 1422 aa24.75■■□□□ 1.55
LRCH2-202ENST00000538422 KANK4Q5T7N3 995 aaPredicted RBP24.74■■□□□ 1.55
LRCH2-202ENST00000538422 ARID4BQ4LE39 1312 aaPredicted RBP24.7■■□□□ 1.54
LRCH2-202ENST00000538422 ARHGAP35Q9NRY4 1499 aa24.69■■□□□ 1.54
LRCH2-202ENST00000538422 TRHP20396 242 aaPredicted RBP24.66■■□□□ 1.54
LRCH2-202ENST00000538422 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
LRCH2-202ENST00000538422 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.54
LRCH2-202ENST00000538422 MRC2Q9UBG0 1479 aa24.63■■□□□ 1.53
LRCH2-202ENST00000538422 ERICH6Q7L0X2 663 aa24.62■■□□□ 1.53
LRCH2-202ENST00000538422 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
LRCH2-202ENST00000538422 UNC13AQ9UPW8 1703 aa24.61■■□□□ 1.53
LRCH2-202ENST00000538422 RGL3Q3MIN7 710 aa24.59■■□□□ 1.53
LRCH2-202ENST00000538422 EFCAB2Q5VUJ9 269 aa24.59■■□□□ 1.53
LRCH2-202ENST00000538422 DDX10Q13206 875 aaKnown RBP24.56■■□□□ 1.52
LRCH2-202ENST00000538422 PTPRGP23470 1445 aa24.55■■□□□ 1.52
LRCH2-202ENST00000538422 PPP1R15AO75807 674 aaPredicted RBP24.55■■□□□ 1.52
LRCH2-202ENST00000538422 NEFMP07197 916 aa24.55■■□□□ 1.52
LRCH2-202ENST00000538422 TOPBP1Q92547 1522 aa24.54■■□□□ 1.52
LRCH2-202ENST00000538422 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
LRCH2-202ENST00000538422 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
LRCH2-202ENST00000538422 EIF4G2P78344 907 aaKnown RBP eCLIP24.51■■□□□ 1.51
LRCH2-202ENST00000538422 CCDC18Q5T9S5 1454 aa24.48■■□□□ 1.51
LRCH2-202ENST00000538422 IFT140Q96RY7 1462 aa24.48■■□□□ 1.51
LRCH2-202ENST00000538422 PEG3Q9GZU2 1588 aa24.47■■□□□ 1.51
LRCH2-202ENST00000538422 CUX1P39880 1505 aa24.46■■□□□ 1.51
LRCH2-202ENST00000538422 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
LRCH2-202ENST00000538422 LAMC3Q9Y6N6 1575 aa24.44■■□□□ 1.5
LRCH2-202ENST00000538422 CLSPNQ9HAW4 1339 aa24.44■■□□□ 1.5
LRCH2-202ENST00000538422 KANK1Q14678 1352 aa24.44■■□□□ 1.5
LRCH2-202ENST00000538422 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
LRCH2-202ENST00000538422 SENP3Q9H4L4 574 aaPredicted RBP24.43■■□□□ 1.5
LRCH2-202ENST00000538422 SETD5Q9C0A6 1442 aa24.43■■□□□ 1.5
LRCH2-202ENST00000538422 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
LRCH2-202ENST00000538422 HIRIP3Q9BW71 556 aaPredicted RBP24.41■■□□□ 1.5
LRCH2-202ENST00000538422 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
LRCH2-202ENST00000538422 DNMBPQ6XZF7 1577 aa24.39■■□□□ 1.5
LRCH2-202ENST00000538422 MLECQ14165 292 aa24.37■■□□□ 1.49
LRCH2-202ENST00000538422 RSPH4AQ5TD94 716 aa24.36■■□□□ 1.49
LRCH2-202ENST00000538422 GGT6Q6P531 493 aa24.36■■□□□ 1.49
LRCH2-202ENST00000538422 ANKRD30AQ9BXX3 1397 aa24.36■■□□□ 1.49
LRCH2-202ENST00000538422 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
LRCH2-202ENST00000538422 SLC24A1O60721 1099 aa24.33■■□□□ 1.48
LRCH2-202ENST00000538422 CARD11Q9BXL7 1154 aa24.3■■□□□ 1.48
LRCH2-202ENST00000538422 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
LRCH2-202ENST00000538422 SPAG9O60271 1321 aaKnown RBP24.28■■□□□ 1.48
LRCH2-202ENST00000538422 PKD2Q13563 968 aa24.28■■□□□ 1.48
LRCH2-202ENST00000538422 KIF21BO75037 1637 aa24.27■■□□□ 1.48
LRCH2-202ENST00000538422 TMC1Q8TDI8 760 aa24.26■■□□□ 1.47
LRCH2-202ENST00000538422 RAB3GAP2Q9H2M9 1393 aa24.25■■□□□ 1.47
LRCH2-202ENST00000538422 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
LRCH2-202ENST00000538422 NUP155O75694 1391 aa24.24■■□□□ 1.47
LRCH2-202ENST00000538422 TIMELESSQ9UNS1 1208 aa24.24■■□□□ 1.47
LRCH2-202ENST00000538422 FAM9BQ8IZU0 186 aa24.23■■□□□ 1.47
LRCH2-202ENST00000538422 CDCA8Q53HL2 280 aa24.22■■□□□ 1.47
LRCH2-202ENST00000538422 DCAF11Q8TEB1 546 aa24.22■■□□□ 1.47
LRCH2-202ENST00000538422 C14orf37Q86TY3 774 aa24.21■■□□□ 1.47
LRCH2-202ENST00000538422 KIF3BO15066 747 aa24.21■■□□□ 1.47
LRCH2-202ENST00000538422 SNAPC4Q5SXM2 1469 aa24.21■■□□□ 1.47
LRCH2-202ENST00000538422 CANXP27824 592 aaKnown RBP24.2■■□□□ 1.47
LRCH2-202ENST00000538422 MPHOSPH9Q99550 1183 aa24.19■■□□□ 1.46
LRCH2-202ENST00000538422 DAXXQ9UER7 740 aaPredicted RBP24.19■■□□□ 1.46
LRCH2-202ENST00000538422 ABCA10Q8WWZ4 1543 aa24.18■■□□□ 1.46
LRCH2-202ENST00000538422 HNRNPUQ00839 825 aaKnown RBP eCLIP24.17■■□□□ 1.46
LRCH2-202ENST00000538422 FOXD1Q16676 465 aa24.16■■□□□ 1.46
LRCH2-202ENST00000538422 MRS2Q9HD23 443 aa24.16■■□□□ 1.46
LRCH2-202ENST00000538422 PRG4Q92954 1404 aaPredicted RBP24.16■■□□□ 1.46
LRCH2-202ENST00000538422 HDGFP51858 240 aaKnown RBP24.14■■□□□ 1.45
LRCH2-202ENST00000538422 WDR43Q15061 677 aaKnown RBP eCLIP24.12■■□□□ 1.45
LRCH2-202ENST00000538422 POGKQ9P215 609 aa24.12■■□□□ 1.45
LRCH2-202ENST00000538422 CASKIN1Q8WXD9 1431 aa24.11■■□□□ 1.45
LRCH2-202ENST00000538422 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
LRCH2-202ENST00000538422 GTF3C3Q9Y5Q9 886 aa24.06■■□□□ 1.44
LRCH2-202ENST00000538422 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
LRCH2-202ENST00000538422 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
LRCH2-202ENST00000538422 ZBTB47Q9UFB7 747 aaPredicted RBP24.06■■□□□ 1.44
LRCH2-202ENST00000538422 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
LRCH2-202ENST00000538422 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
LRCH2-202ENST00000538422 MIER1Q8N108 512 aa24.04■■□□□ 1.44
LRCH2-202ENST00000538422 EFCAB5A4FU69 1503 aa24.04■■□□□ 1.44
LRCH2-202ENST00000538422 KNSTRNQ9Y448 316 aa24.04■■□□□ 1.44
LRCH2-202ENST00000538422 WASHC2CQ9Y4E1 1318 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms