RNA–Protein interactions for RNA: ENST00000538297.1

AC087235.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC087235.1, Length 1,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087235.1-201ENST00000538297 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
AC087235.1-201ENST00000538297 ABCA5Q8WWZ7 1642 aa18.51■□□□□ 0.55
AC087235.1-201ENST00000538297 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
AC087235.1-201ENST00000538297 ERICH3Q5RHP9 1530 aa18.47■□□□□ 0.55
AC087235.1-201ENST00000538297 EEA1Q15075 1411 aa18.42■□□□□ 0.54
AC087235.1-201ENST00000538297 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
AC087235.1-201ENST00000538297 IGF1RP08069 1367 aa18.4■□□□□ 0.54
AC087235.1-201ENST00000538297 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
AC087235.1-201ENST00000538297 SNAPC4Q5SXM2 1469 aa18.38■□□□□ 0.53
AC087235.1-201ENST00000538297 FHAD1B1AJZ9 1412 aa18.37■□□□□ 0.53
AC087235.1-201ENST00000538297 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
AC087235.1-201ENST00000538297 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
AC087235.1-201ENST00000538297 APLP2Q06481 763 aa18.34■□□□□ 0.53
AC087235.1-201ENST00000538297 CUL7Q14999 1698 aa18.33■□□□□ 0.53
AC087235.1-201ENST00000538297 SLC4A2P04920 1241 aa18.33■□□□□ 0.53
AC087235.1-201ENST00000538297 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
AC087235.1-201ENST00000538297 KCNA4P22459 653 aa18.31■□□□□ 0.52
AC087235.1-201ENST00000538297 FBLN2P98095 1184 aa18.3■□□□□ 0.52
AC087235.1-201ENST00000538297 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
AC087235.1-201ENST00000538297 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
AC087235.1-201ENST00000538297 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
AC087235.1-201ENST00000538297 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
AC087235.1-201ENST00000538297 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.52
AC087235.1-201ENST00000538297 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
AC087235.1-201ENST00000538297 ABCB7O75027 752 aa18.24■□□□□ 0.51
AC087235.1-201ENST00000538297 CHD1O14646 1710 aa18.24■□□□□ 0.51
AC087235.1-201ENST00000538297 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
AC087235.1-201ENST00000538297 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
AC087235.1-201ENST00000538297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
AC087235.1-201ENST00000538297 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
AC087235.1-201ENST00000538297 NUP160Q12769 1436 aa18.18■□□□□ 0.5
AC087235.1-201ENST00000538297 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
AC087235.1-201ENST00000538297 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
AC087235.1-201ENST00000538297 KIAA0586Q9BVV6 1533 aa18.12■□□□□ 0.49
AC087235.1-201ENST00000538297 CLASP1Q7Z460 1538 aa18.1■□□□□ 0.49
AC087235.1-201ENST00000538297 KIF21BO75037 1637 aa18.1■□□□□ 0.49
AC087235.1-201ENST00000538297 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
AC087235.1-201ENST00000538297 SAMD1Q6SPF0 538 aaPredicted RBP18.05■□□□□ 0.48
AC087235.1-201ENST00000538297 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
AC087235.1-201ENST00000538297 GOLGA3Q08378 1498 aa18.02■□□□□ 0.47
AC087235.1-201ENST00000538297 IQGAP2Q13576 1575 aa17.99■□□□□ 0.47
AC087235.1-201ENST00000538297 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
AC087235.1-201ENST00000538297 CTTNBP2Q8WZ74 1663 aa17.97■□□□□ 0.47
AC087235.1-201ENST00000538297 UBTFP17480 764 aaKnown RBP17.97■□□□□ 0.47
AC087235.1-201ENST00000538297 CARMIL2Q6F5E8 1435 aa17.94■□□□□ 0.46
AC087235.1-201ENST00000538297 UGGT2Q9NYU1 1516 aa17.94■□□□□ 0.46
AC087235.1-201ENST00000538297 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
AC087235.1-201ENST00000538297 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
AC087235.1-201ENST00000538297 RBM42Q9BTD8 480 aaKnown RBP17.92■□□□□ 0.46
AC087235.1-201ENST00000538297 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
AC087235.1-201ENST00000538297 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
AC087235.1-201ENST00000538297 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
AC087235.1-201ENST00000538297 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
AC087235.1-201ENST00000538297 DISP1Q96F81 1524 aa17.83■□□□□ 0.44
AC087235.1-201ENST00000538297 EFCAB5A4FU69 1503 aa17.8■□□□□ 0.44
AC087235.1-201ENST00000538297 PTPRGP23470 1445 aa17.79■□□□□ 0.44
AC087235.1-201ENST00000538297 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
AC087235.1-201ENST00000538297 KIAA0556O60303 1618 aa17.78■□□□□ 0.44
AC087235.1-201ENST00000538297 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
AC087235.1-201ENST00000538297 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
AC087235.1-201ENST00000538297 SAMD9Q5K651 1589 aa17.77■□□□□ 0.43
AC087235.1-201ENST00000538297 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.43
AC087235.1-201ENST00000538297 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
AC087235.1-201ENST00000538297 MYCNP04198 464 aaPredicted RBP17.71■□□□□ 0.42
AC087235.1-201ENST00000538297 POLA2Q14181 598 aa17.71■□□□□ 0.42
AC087235.1-201ENST00000538297 CLIP1P30622 1438 aa17.69■□□□□ 0.42
AC087235.1-201ENST00000538297 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
AC087235.1-201ENST00000538297 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
AC087235.1-201ENST00000538297 FMN1Q68DA7 1419 aa17.68■□□□□ 0.42
AC087235.1-201ENST00000538297 UHRF1BP1LA0JNW5 1464 aa17.68■□□□□ 0.42
AC087235.1-201ENST00000538297 CHRDL2Q6WN34 429 aa17.67■□□□□ 0.42
AC087235.1-201ENST00000538297 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
AC087235.1-201ENST00000538297 NPM1P06748 294 aaKnown RBP eCLIP17.66■□□□□ 0.42
AC087235.1-201ENST00000538297 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
AC087235.1-201ENST00000538297 CEP162Q5TB80 1403 aa17.65■□□□□ 0.42
AC087235.1-201ENST00000538297 FHOD3Q2V2M9 1422 aa17.62■□□□□ 0.41
AC087235.1-201ENST00000538297 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
AC087235.1-201ENST00000538297 TTBK1Q5TCY1 1321 aaPredicted RBP17.6■□□□□ 0.41
AC087235.1-201ENST00000538297 ABCA8O94911 1581 aa17.6■□□□□ 0.41
AC087235.1-201ENST00000538297 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.4
AC087235.1-201ENST00000538297 KDM5BQ9UGL1 1544 aa17.56■□□□□ 0.4
AC087235.1-201ENST00000538297 ADCY10Q96PN6 1610 aa17.56■□□□□ 0.4
AC087235.1-201ENST00000538297 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
AC087235.1-201ENST00000538297 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
AC087235.1-201ENST00000538297 MAPKBP1O60336 1514 aa17.5■□□□□ 0.39
AC087235.1-201ENST00000538297 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
AC087235.1-201ENST00000538297 CDK11AQ9UQ88 783 aaPredicted RBP17.48■□□□□ 0.39
AC087235.1-201ENST00000538297 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
AC087235.1-201ENST00000538297 HECW1Q76N89 1606 aa17.48■□□□□ 0.39
AC087235.1-201ENST00000538297 ATP10BO94823 1461 aa17.47■□□□□ 0.39
AC087235.1-201ENST00000538297 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
AC087235.1-201ENST00000538297 CCDC18Q5T9S5 1454 aa17.45■□□□□ 0.38
AC087235.1-201ENST00000538297 ZCCHC11Q5TAX3 1644 aaKnown RBP17.44■□□□□ 0.38
AC087235.1-201ENST00000538297 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
AC087235.1-201ENST00000538297 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
AC087235.1-201ENST00000538297 EPRSP07814 1512 aaKnown RBP17.43■□□□□ 0.38
AC087235.1-201ENST00000538297 ASXL2Q76L83 1435 aa17.42■□□□□ 0.38
AC087235.1-201ENST00000538297 PCF11O94913 1555 aaKnown RBP17.39■□□□□ 0.38
AC087235.1-201ENST00000538297 WDR7Q9Y4E6 1490 aa17.39■□□□□ 0.37
AC087235.1-201ENST00000538297 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms