RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 KCNH8Q96L42 1107 aa18.8■□□□□ 0.6
TSPAN9-206ENST00000537971 PTPRGP23470 1445 aa18.8■□□□□ 0.6
TSPAN9-206ENST00000537971 RAPGEF2Q9Y4G8 1499 aa18.79■□□□□ 0.6
TSPAN9-206ENST00000537971 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
TSPAN9-206ENST00000537971 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
TSPAN9-206ENST00000537971 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
TSPAN9-206ENST00000537971 PLEKHD1A6NEE1 506 aa18.73■□□□□ 0.59
TSPAN9-206ENST00000537971 ERICH3Q5RHP9 1530 aa18.73■□□□□ 0.59
TSPAN9-206ENST00000537971 FAM69CQ0P6D2 419 aa18.7■□□□□ 0.58
TSPAN9-206ENST00000537971 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
TSPAN9-206ENST00000537971 GOLGA3Q08378 1498 aa18.68■□□□□ 0.58
TSPAN9-206ENST00000537971 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
TSPAN9-206ENST00000537971 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.58
TSPAN9-206ENST00000537971 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
TSPAN9-206ENST00000537971 KIAA0586Q9BVV6 1533 aa18.63■□□□□ 0.57
TSPAN9-206ENST00000537971 ESF1Q9H501 851 aaKnown RBP18.57■□□□□ 0.56
TSPAN9-206ENST00000537971 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
TSPAN9-206ENST00000537971 CUL7Q14999 1698 aa18.52■□□□□ 0.56
TSPAN9-206ENST00000537971 ARID4BQ4LE39 1312 aaPredicted RBP18.5■□□□□ 0.55
TSPAN9-206ENST00000537971 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
TSPAN9-206ENST00000537971 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
TSPAN9-206ENST00000537971 NUP160Q12769 1436 aa18.48■□□□□ 0.55
TSPAN9-206ENST00000537971 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
TSPAN9-206ENST00000537971 RUSC2Q8N2Y8 1516 aa18.47■□□□□ 0.55
TSPAN9-206ENST00000537971 PBRM1Q86U86 1689 aa18.46■□□□□ 0.55
TSPAN9-206ENST00000537971 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
TSPAN9-206ENST00000537971 CHD1O14646 1710 aa18.45■□□□□ 0.54
TSPAN9-206ENST00000537971 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
TSPAN9-206ENST00000537971 IQGAP2Q13576 1575 aa18.4■□□□□ 0.54
TSPAN9-206ENST00000537971 CLIP1P30622 1438 aa18.4■□□□□ 0.54
TSPAN9-206ENST00000537971 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
TSPAN9-206ENST00000537971 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
TSPAN9-206ENST00000537971 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
TSPAN9-206ENST00000537971 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
TSPAN9-206ENST00000537971 CEP170Q5SW79 1584 aa18.33■□□□□ 0.53
TSPAN9-206ENST00000537971 EFCAB2Q5VUJ9 269 aa18.33■□□□□ 0.52
TSPAN9-206ENST00000537971 RIMBP3CA6NJZ7 1639 aa18.33■□□□□ 0.52
TSPAN9-206ENST00000537971 RIMBP3BA6NNM3 1639 aa18.33■□□□□ 0.52
TSPAN9-206ENST00000537971 RIMBP3Q9UFD9 1639 aa18.33■□□□□ 0.52
TSPAN9-206ENST00000537971 ARAP1Q96P48 1450 aa18.32■□□□□ 0.52
TSPAN9-206ENST00000537971 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
TSPAN9-206ENST00000537971 PRXQ9BXM0 1461 aa18.3■□□□□ 0.52
TSPAN9-206ENST00000537971 PLB1Q6P1J6 1458 aa18.29■□□□□ 0.52
TSPAN9-206ENST00000537971 CCER1Q8TC90 406 aaPredicted RBP18.26■□□□□ 0.51
TSPAN9-206ENST00000537971 CFDP1Q9UEE9 299 aaPredicted RBP18.25■□□□□ 0.51
TSPAN9-206ENST00000537971 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
TSPAN9-206ENST00000537971 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
TSPAN9-206ENST00000537971 HRCP23327 699 aa18.23■□□□□ 0.51
TSPAN9-206ENST00000537971 FAM50AQ14320 339 aaKnown RBP18.21■□□□□ 0.51
TSPAN9-206ENST00000537971 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.5
TSPAN9-206ENST00000537971 MLECQ14165 292 aa18.18■□□□□ 0.5
TSPAN9-206ENST00000537971 CCNB3Q8WWL7 1395 aa18.17■□□□□ 0.5
TSPAN9-206ENST00000537971 ITGAEP38570 1179 aa18.17■□□□□ 0.5
TSPAN9-206ENST00000537971 ASXL2Q76L83 1435 aa18.16■□□□□ 0.5
TSPAN9-206ENST00000537971 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
TSPAN9-206ENST00000537971 TEX14Q8IWB6 1497 aa18.14■□□□□ 0.49
TSPAN9-206ENST00000537971 CEP162Q5TB80 1403 aa18.14■□□□□ 0.49
TSPAN9-206ENST00000537971 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
TSPAN9-206ENST00000537971 UGGT2Q9NYU1 1516 aa18.12■□□□□ 0.49
TSPAN9-206ENST00000537971 EFCAB5A4FU69 1503 aa18.11■□□□□ 0.49
TSPAN9-206ENST00000537971 KIF21BO75037 1637 aa18.08■□□□□ 0.48
TSPAN9-206ENST00000537971 CCDC18Q5T9S5 1454 aa18.06■□□□□ 0.48
TSPAN9-206ENST00000537971 ZEB1P37275 1124 aaPredicted RBP18.04■□□□□ 0.48
TSPAN9-206ENST00000537971 WDR7Q9Y4E6 1490 aa18.02■□□□□ 0.48
TSPAN9-206ENST00000537971 KIAA0556O60303 1618 aa18.02■□□□□ 0.48
TSPAN9-206ENST00000537971 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.47
TSPAN9-206ENST00000537971 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
TSPAN9-206ENST00000537971 PHLDB1Q86UU1 1377 aa18■□□□□ 0.47
TSPAN9-206ENST00000537971 SPAG9O60271 1321 aaKnown RBP17.99■□□□□ 0.47
TSPAN9-206ENST00000537971 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
TSPAN9-206ENST00000537971 UHRF1BP1LA0JNW5 1464 aa17.97■□□□□ 0.47
TSPAN9-206ENST00000537971 PELP1Q8IZL8 1130 aaKnown RBP17.97■□□□□ 0.47
TSPAN9-206ENST00000537971 RSPH4AQ5TD94 716 aa17.97■□□□□ 0.47
TSPAN9-206ENST00000537971 TRIM26Q12899 539 aaPredicted RBP17.96■□□□□ 0.47
TSPAN9-206ENST00000537971 POGZQ7Z3K3 1410 aa17.96■□□□□ 0.47
TSPAN9-206ENST00000537971 RAPGEF3O95398 923 aa17.96■□□□□ 0.47
TSPAN9-206ENST00000537971 BCANQ96GW7 911 aa17.96■□□□□ 0.47
TSPAN9-206ENST00000537971 ABCC10Q5T3U5 1492 aa17.96■□□□□ 0.47
TSPAN9-206ENST00000537971 YTHDC1Q96MU7 727 aaKnown RBP17.95■□□□□ 0.46
TSPAN9-206ENST00000537971 CTTNBP2Q8WZ74 1663 aa17.94■□□□□ 0.46
TSPAN9-206ENST00000537971 GGT6Q6P531 493 aa17.93■□□□□ 0.46
TSPAN9-206ENST00000537971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
TSPAN9-206ENST00000537971 CENPBP07199 599 aaPredicted RBP17.92■□□□□ 0.46
TSPAN9-206ENST00000537971 CASKIN1Q8WXD9 1431 aa17.91■□□□□ 0.46
TSPAN9-206ENST00000537971 ATP10BO94823 1461 aa17.9■□□□□ 0.46
TSPAN9-206ENST00000537971 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
TSPAN9-206ENST00000537971 HNRNPMP52272 730 aaKnown RBP eCLIP17.9■□□□□ 0.462e-6■■■■□ 21.5
TSPAN9-206ENST00000537971 TROQ12816 1431 aaPredicted RBP17.9■□□□□ 0.46
TSPAN9-206ENST00000537971 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
TSPAN9-206ENST00000537971 TRIM52Q96A61 297 aa17.89■□□□□ 0.46
TSPAN9-206ENST00000537971 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
TSPAN9-206ENST00000537971 VPS8Q8N3P4 1428 aa17.87■□□□□ 0.45
TSPAN9-206ENST00000537971 ARHGAP5Q13017 1502 aa17.87■□□□□ 0.45
TSPAN9-206ENST00000537971 SCAPERQ9BY12 1400 aa17.87■□□□□ 0.45
TSPAN9-206ENST00000537971 SHROOM2Q13796 1616 aa17.86■□□□□ 0.45
TSPAN9-206ENST00000537971 DENND4BO75064 1496 aaPredicted RBP17.86■□□□□ 0.45
TSPAN9-206ENST00000537971 KDM5BQ9UGL1 1544 aa17.86■□□□□ 0.45
TSPAN9-206ENST00000537971 RAPGEF6Q8TEU7 1601 aa17.85■□□□□ 0.45
TSPAN9-206ENST00000537971 EPRSP07814 1512 aaKnown RBP17.84■□□□□ 0.45
TSPAN9-206ENST00000537971 AFAP1Q8N556 730 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms