RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.94
USP44-203ENST00000537435 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
USP44-203ENST00000537435 P3H3Q8IVL6 736 aa20.88■□□□□ 0.93
USP44-203ENST00000537435 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
USP44-203ENST00000537435 PHLDB1Q86UU1 1377 aa20.87■□□□□ 0.93
USP44-203ENST00000537435 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
USP44-203ENST00000537435 POLA1P09884 1462 aaPredicted RBP20.86■□□□□ 0.93
USP44-203ENST00000537435 PCF11O94913 1555 aaKnown RBP20.84■□□□□ 0.93
USP44-203ENST00000537435 NESP48681 1621 aa20.83■□□□□ 0.92
USP44-203ENST00000537435 ATP1B4Q9UN42 357 aaPredicted RBP20.82■□□□□ 0.92
USP44-203ENST00000537435 FHOD3Q2V2M9 1422 aa20.82■□□□□ 0.92
USP44-203ENST00000537435 SETD5Q9C0A6 1442 aa20.81■□□□□ 0.92
USP44-203ENST00000537435 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
USP44-203ENST00000537435 FAM50AQ14320 339 aaKnown RBP20.8■□□□□ 0.92
USP44-203ENST00000537435 MAPKBP1O60336 1514 aa20.79■□□□□ 0.92
USP44-203ENST00000537435 EFCAB5A4FU69 1503 aa20.76■□□□□ 0.91
USP44-203ENST00000537435 FYCO1Q9BQS8 1478 aa20.75■□□□□ 0.91
USP44-203ENST00000537435 CUL7Q14999 1698 aa20.75■□□□□ 0.91
USP44-203ENST00000537435 CASKIN1Q8WXD9 1431 aa20.74■□□□□ 0.91
USP44-203ENST00000537435 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.91
USP44-203ENST00000537435 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
USP44-203ENST00000537435 CTTNBP2Q8WZ74 1663 aa20.68■□□□□ 0.9
USP44-203ENST00000537435 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
USP44-203ENST00000537435 FMN1Q68DA7 1419 aa20.66■□□□□ 0.9
USP44-203ENST00000537435 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
USP44-203ENST00000537435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.64■□□□□ 0.89
USP44-203ENST00000537435 WDR97A6NE52 1622 aa20.64■□□□□ 0.89
USP44-203ENST00000537435 TDRD9Q8NDG6 1382 aaKnown RBP20.64■□□□□ 0.89
USP44-203ENST00000537435 SNAPC4Q5SXM2 1469 aa20.61■□□□□ 0.89
USP44-203ENST00000537435 GAPVD1Q14C86 1478 aa20.59■□□□□ 0.89
USP44-203ENST00000537435 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
USP44-203ENST00000537435 FGD6Q6ZV73 1430 aa20.58■□□□□ 0.89
USP44-203ENST00000537435 MTUS2Q5JR59 1369 aa20.57■□□□□ 0.88
USP44-203ENST00000537435 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
USP44-203ENST00000537435 TIMELESSQ9UNS1 1208 aa20.55■□□□□ 0.88
USP44-203ENST00000537435 SAMD9Q5K651 1589 aa20.55■□□□□ 0.88
USP44-203ENST00000537435 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
USP44-203ENST00000537435 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
USP44-203ENST00000537435 PPP1R15AO75807 674 aaPredicted RBP20.48■□□□□ 0.87
USP44-203ENST00000537435 PTPRKQ15262 1439 aa20.47■□□□□ 0.87
USP44-203ENST00000537435 NCOA2Q15596 1464 aa20.47■□□□□ 0.87
USP44-203ENST00000537435 DDX10Q13206 875 aaKnown RBP20.46■□□□□ 0.87
USP44-203ENST00000537435 CCDC18Q5T9S5 1454 aa20.46■□□□□ 0.87
USP44-203ENST00000537435 LRRIQ1Q96JM4 1722 aa20.46■□□□□ 0.87
USP44-203ENST00000537435 KCNH8Q96L42 1107 aa20.46■□□□□ 0.87
USP44-203ENST00000537435 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
USP44-203ENST00000537435 MYOM3Q5VTT5 1437 aa20.45■□□□□ 0.86
USP44-203ENST00000537435 THOC2Q8NI27 1593 aaKnown RBP20.44■□□□□ 0.86
USP44-203ENST00000537435 KIF21AQ7Z4S6 1674 aa20.43■□□□□ 0.86
USP44-203ENST00000537435 SUPT16HQ9Y5B9 1047 aaKnown RBP20.42■□□□□ 0.86
USP44-203ENST00000537435 EHBP1L1Q8N3D4 1523 aa20.42■□□□□ 0.86
USP44-203ENST00000537435 UACAQ9BZF9 1416 aa20.41■□□□□ 0.86
USP44-203ENST00000537435 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
USP44-203ENST00000537435 PTPN23Q9H3S7 1636 aa20.41■□□□□ 0.86
USP44-203ENST00000537435 SUPT6HQ7KZ85 1726 aaKnown RBP20.4■□□□□ 0.86
USP44-203ENST00000537435 TONSLQ96HA7 1378 aa20.39■□□□□ 0.86
USP44-203ENST00000537435 NAIPQ13075 1403 aa20.39■□□□□ 0.85
USP44-203ENST00000537435 HIRIP3Q9BW71 556 aaPredicted RBP20.39■□□□□ 0.85
USP44-203ENST00000537435 UGGT2Q9NYU1 1516 aa20.36■□□□□ 0.85
USP44-203ENST00000537435 MAGI3Q5TCQ9 1506 aa20.35■□□□□ 0.85
USP44-203ENST00000537435 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
USP44-203ENST00000537435 PBRM1Q86U86 1689 aa20.3■□□□□ 0.84
USP44-203ENST00000537435 IQGAP2Q13576 1575 aa20.29■□□□□ 0.84
USP44-203ENST00000537435 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
USP44-203ENST00000537435 RRP7BPQ9NSQ0 103 aa20.28■□□□□ 0.84
USP44-203ENST00000537435 TCOF1Q13428 1488 aaKnown RBP20.27■□□□□ 0.84
USP44-203ENST00000537435 ADAMTS12P58397 1594 aa20.27■□□□□ 0.84
USP44-203ENST00000537435 CHIC2Q9UKJ5 165 aa20.27■□□□□ 0.83
USP44-203ENST00000537435 EPRSP07814 1512 aaKnown RBP20.26■□□□□ 0.83
USP44-203ENST00000537435 ANP32CO43423 234 aa20.26■□□□□ 0.83
USP44-203ENST00000537435 CCER2I3L3R5 266 aa20.24■□□□□ 0.83
USP44-203ENST00000537435 MRC2Q9UBG0 1479 aa20.23■□□□□ 0.83
USP44-203ENST00000537435 CDK13Q14004 1512 aaKnown RBP20.23■□□□□ 0.83
USP44-203ENST00000537435 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
USP44-203ENST00000537435 KDM5BQ9UGL1 1544 aa20.21■□□□□ 0.83
USP44-203ENST00000537435 MIA2Q96PC5 1412 aa20.2■□□□□ 0.82
USP44-203ENST00000537435 WDR62O43379 1518 aa20.2■□□□□ 0.82
USP44-203ENST00000537435 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
USP44-203ENST00000537435 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
USP44-203ENST00000537435 GCC2Q8IWJ2 1684 aa20.18■□□□□ 0.82
USP44-203ENST00000537435 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
USP44-203ENST00000537435 KDM6BO15054 1643 aa20.15■□□□□ 0.82
USP44-203ENST00000537435 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.81
USP44-203ENST00000537435 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
USP44-203ENST00000537435 MPHOSPH9Q99550 1183 aa20.12■□□□□ 0.81
USP44-203ENST00000537435 KIAA0586Q9BVV6 1533 aa20.1■□□□□ 0.81
USP44-203ENST00000537435 FKBP8Q14318 412 aa20.09■□□□□ 0.81
USP44-203ENST00000537435 DISP1Q96F81 1524 aa20.08■□□□□ 0.81
USP44-203ENST00000537435 KIAA0556O60303 1618 aa20.08■□□□□ 0.8
USP44-203ENST00000537435 HSPA5P11021 654 aaKnown RBP20.08■□□□□ 0.8
USP44-203ENST00000537435 BCANQ96GW7 911 aa20.07■□□□□ 0.8
USP44-203ENST00000537435 DAPK1P53355 1430 aa20.06■□□□□ 0.8
USP44-203ENST00000537435 FOXD1Q16676 465 aa20.05■□□□□ 0.8
USP44-203ENST00000537435 TSHZ2Q9NRE2 1034 aa20.05■□□□□ 0.8
USP44-203ENST00000537435 NUP153P49790 1475 aaKnown RBP20.05■□□□□ 0.8
USP44-203ENST00000537435 MYT1Q01538 1121 aa20.04■□□□□ 0.8
USP44-203ENST00000537435 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
USP44-203ENST00000537435 WASHC2AQ641Q2 1341 aa20.04■□□□□ 0.8
USP44-203ENST00000537435 ABCC5O15440 1437 aa20.03■□□□□ 0.8
USP44-203ENST00000537435 L3MBTL2Q969R5 705 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 745.7 ms