RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
CD4-204ENST00000535707 RUSC2Q8N2Y8 1516 aa14.66□□□□□ -0.06
CD4-204ENST00000535707 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
CD4-204ENST00000535707 AMER1Q5JTC6 1135 aaPredicted RBP14.65□□□□□ -0.06
CD4-204ENST00000535707 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
CD4-204ENST00000535707 PRXQ9BXM0 1461 aa14.61□□□□□ -0.07
CD4-204ENST00000535707 CARMIL1Q5VZK9 1371 aa14.6□□□□□ -0.07
CD4-204ENST00000535707 RAPGEF2Q9Y4G8 1499 aa14.58□□□□□ -0.08
CD4-204ENST00000535707 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
CD4-204ENST00000535707 KIF21BO75037 1637 aa14.58□□□□□ -0.08
CD4-204ENST00000535707 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
CD4-204ENST00000535707 CHD1O14646 1710 aa14.55□□□□□ -0.08
CD4-204ENST00000535707 CHMP7Q8WUX9 453 aaPredicted RBP14.55□□□□□ -0.08
CD4-204ENST00000535707 NUP160Q12769 1436 aa14.52□□□□□ -0.08
CD4-204ENST00000535707 GOLGA3Q08378 1498 aa14.48□□□□□ -0.09
CD4-204ENST00000535707 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
CD4-204ENST00000535707 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
CD4-204ENST00000535707 FBLN2P98095 1184 aa14.46□□□□□ -0.09
CD4-204ENST00000535707 CEP170Q5SW79 1584 aa14.46□□□□□ -0.09
CD4-204ENST00000535707 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.1
CD4-204ENST00000535707 KIAA0586Q9BVV6 1533 aa14.46□□□□□ -0.1
CD4-204ENST00000535707 CTTNBP2Q8WZ74 1663 aa14.44□□□□□ -0.1
CD4-204ENST00000535707 IQGAP2Q13576 1575 aa14.4□□□□□ -0.1
CD4-204ENST00000535707 SHROOM2Q13796 1616 aa14.4□□□□□ -0.1
CD4-204ENST00000535707 UGGT2Q9NYU1 1516 aa14.36□□□□□ -0.11
CD4-204ENST00000535707 TNIKQ9UKE5 1360 aa14.35□□□□□ -0.11
CD4-204ENST00000535707 UBTFP17480 764 aaKnown RBP14.32□□□□□ -0.12
CD4-204ENST00000535707 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
CD4-204ENST00000535707 EFCAB5A4FU69 1503 aa14.31□□□□□ -0.12
CD4-204ENST00000535707 CARMIL2Q6F5E8 1435 aa14.29□□□□□ -0.12
CD4-204ENST00000535707 SAMD9Q5K651 1589 aa14.28□□□□□ -0.12
CD4-204ENST00000535707 DISP1Q96F81 1524 aa14.26□□□□□ -0.13
CD4-204ENST00000535707 PRG4Q92954 1404 aaPredicted RBP14.26□□□□□ -0.13
CD4-204ENST00000535707 KIAA0556O60303 1618 aa14.25□□□□□ -0.13
CD4-204ENST00000535707 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
CD4-204ENST00000535707 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
CD4-204ENST00000535707 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
CD4-204ENST00000535707 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
CD4-204ENST00000535707 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
CD4-204ENST00000535707 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
CD4-204ENST00000535707 CLIP1P30622 1438 aa14.19□□□□□ -0.14
CD4-204ENST00000535707 CEP162Q5TB80 1403 aa14.19□□□□□ -0.14
CD4-204ENST00000535707 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
CD4-204ENST00000535707 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
CD4-204ENST00000535707 ERCC6L2Q5T890 1561 aa14.18□□□□□ -0.14
CD4-204ENST00000535707 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
CD4-204ENST00000535707 PTPRGP23470 1445 aa14.15□□□□□ -0.14
CD4-204ENST00000535707 FMN1Q68DA7 1419 aa14.15□□□□□ -0.14
CD4-204ENST00000535707 FKBP8Q14318 412 aa14.14□□□□□ -0.15
CD4-204ENST00000535707 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
CD4-204ENST00000535707 UHRF1BP1LA0JNW5 1464 aa14.11□□□□□ -0.15
CD4-204ENST00000535707 FHOD3Q2V2M9 1422 aa14.1□□□□□ -0.15
CD4-204ENST00000535707 ABCA8O94911 1581 aa14.09□□□□□ -0.15
CD4-204ENST00000535707 UACAQ9BZF9 1416 aa14.08□□□□□ -0.15
CD4-204ENST00000535707 ABCC2Q92887 1545 aa14.07□□□□□ -0.16
CD4-204ENST00000535707 RAPGEF6Q8TEU7 1601 aa14.06□□□□□ -0.16
CD4-204ENST00000535707 MSH5O43196 834 aa14.05□□□□□ -0.16
CD4-204ENST00000535707 RANGAP1P46060 587 aaPredicted RBP14.05□□□□□ -0.16
CD4-204ENST00000535707 P3H3Q8IVL6 736 aa14.05□□□□□ -0.16
CD4-204ENST00000535707 VPS8Q8N3P4 1428 aa14.05□□□□□ -0.16
CD4-204ENST00000535707 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
CD4-204ENST00000535707 FYCO1Q9BQS8 1478 aa14.05□□□□□ -0.16
CD4-204ENST00000535707 PLB1Q6P1J6 1458 aa14.03□□□□□ -0.16
CD4-204ENST00000535707 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
CD4-204ENST00000535707 ADCY10Q96PN6 1610 aa14.02□□□□□ -0.16
CD4-204ENST00000535707 KDM5BQ9UGL1 1544 aa14.01□□□□□ -0.17
CD4-204ENST00000535707 CYB5RLQ6IPT4 315 aa14.01□□□□□ -0.17
CD4-204ENST00000535707 NUP153P49790 1475 aaKnown RBP13.99□□□□□ -0.17
CD4-204ENST00000535707 CCDC18Q5T9S5 1454 aa13.99□□□□□ -0.17
CD4-204ENST00000535707 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
CD4-204ENST00000535707 PCF11O94913 1555 aaKnown RBP13.99□□□□□ -0.17
CD4-204ENST00000535707 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
CD4-204ENST00000535707 MAP3K1Q13233 1512 aa13.97□□□□□ -0.17
CD4-204ENST00000535707 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
CD4-204ENST00000535707 EPRSP07814 1512 aaKnown RBP13.95□□□□□ -0.18
CD4-204ENST00000535707 ZCCHC11Q5TAX3 1644 aaKnown RBP13.94□□□□□ -0.18
CD4-204ENST00000535707 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
CD4-204ENST00000535707 ATP10BO94823 1461 aa13.93□□□□□ -0.18
CD4-204ENST00000535707 TTBK1Q5TCY1 1321 aaPredicted RBP13.92□□□□□ -0.18
CD4-204ENST00000535707 LRRIQ1Q96JM4 1722 aa13.91□□□□□ -0.18
CD4-204ENST00000535707 CFAP43Q8NDM7 1665 aa13.91□□□□□ -0.18
CD4-204ENST00000535707 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
CD4-204ENST00000535707 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
CD4-204ENST00000535707 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
CD4-204ENST00000535707 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
CD4-204ENST00000535707 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
CD4-204ENST00000535707 ASXL2Q76L83 1435 aa13.85□□□□□ -0.19
CD4-204ENST00000535707 PLEKHD1A6NEE1 506 aa13.85□□□□□ -0.19
CD4-204ENST00000535707 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
CD4-204ENST00000535707 TROQ12816 1431 aaPredicted RBP13.84□□□□□ -0.19
CD4-204ENST00000535707 APLP2Q06481 763 aa13.84□□□□□ -0.19
CD4-204ENST00000535707 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
CD4-204ENST00000535707 EHBP1L1Q8N3D4 1523 aa13.84□□□□□ -0.19
CD4-204ENST00000535707 GLI2P10070 1586 aa13.83□□□□□ -0.2
CD4-204ENST00000535707 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
CD4-204ENST00000535707 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
CD4-204ENST00000535707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
CD4-204ENST00000535707 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
CD4-204ENST00000535707 KIF14Q15058 1648 aa13.8□□□□□ -0.2
CD4-204ENST00000535707 MAGI3Q5TCQ9 1506 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms