RNA–Protein interactions for RNA: ENST00000535106.5

VPS45-211, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-211ENST00000535106 RAD54L2Q9Y4B4 1467 aa17.6■□□□□ 0.41
VPS45-211ENST00000535106 PHLDB1Q86UU1 1377 aa17.6■□□□□ 0.41
VPS45-211ENST00000535106 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
VPS45-211ENST00000535106 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
VPS45-211ENST00000535106 NESP48681 1621 aa17.54■□□□□ 0.4
VPS45-211ENST00000535106 MAPKBP1O60336 1514 aa17.54■□□□□ 0.4
VPS45-211ENST00000535106 FHAD1B1AJZ9 1412 aa17.53■□□□□ 0.4
VPS45-211ENST00000535106 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
VPS45-211ENST00000535106 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
VPS45-211ENST00000535106 FAM50AQ14320 339 aaKnown RBP17.53■□□□□ 0.4
VPS45-211ENST00000535106 PCF11O94913 1555 aaKnown RBP17.53■□□□□ 0.4
VPS45-211ENST00000535106 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.39
VPS45-211ENST00000535106 TOPBP1Q92547 1522 aa17.52■□□□□ 0.39
VPS45-211ENST00000535106 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.39
VPS45-211ENST00000535106 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
VPS45-211ENST00000535106 CFAP43Q8NDM7 1665 aa17.47■□□□□ 0.39
VPS45-211ENST00000535106 SIN3AQ96ST3 1273 aa17.46■□□□□ 0.39
VPS45-211ENST00000535106 CASKIN1Q8WXD9 1431 aa17.42■□□□□ 0.38
VPS45-211ENST00000535106 FYCO1Q9BQS8 1478 aa17.42■□□□□ 0.38
VPS45-211ENST00000535106 EFCAB5A4FU69 1503 aa17.4■□□□□ 0.38
VPS45-211ENST00000535106 URB2Q14146 1524 aaKnown RBP17.39■□□□□ 0.37
VPS45-211ENST00000535106 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
VPS45-211ENST00000535106 CUL7Q14999 1698 aa17.38■□□□□ 0.37
VPS45-211ENST00000535106 AQRO60306 1485 aaKnown RBP eCLIP17.38■□□□□ 0.371e-6■■■■□ 24.5
VPS45-211ENST00000535106 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
VPS45-211ENST00000535106 KCNH8Q96L42 1107 aa17.37■□□□□ 0.37
VPS45-211ENST00000535106 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
VPS45-211ENST00000535106 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
VPS45-211ENST00000535106 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
VPS45-211ENST00000535106 SNAPC4Q5SXM2 1469 aa17.34■□□□□ 0.37
VPS45-211ENST00000535106 FMN1Q68DA7 1419 aa17.33■□□□□ 0.36
VPS45-211ENST00000535106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
VPS45-211ENST00000535106 FGD6Q6ZV73 1430 aa17.31■□□□□ 0.36
VPS45-211ENST00000535106 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
VPS45-211ENST00000535106 DDX10Q13206 875 aaKnown RBP17.29■□□□□ 0.36
VPS45-211ENST00000535106 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
VPS45-211ENST00000535106 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
VPS45-211ENST00000535106 GAPVD1Q14C86 1478 aa17.28■□□□□ 0.36
VPS45-211ENST00000535106 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
VPS45-211ENST00000535106 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
VPS45-211ENST00000535106 PPP1R15AO75807 674 aaPredicted RBP17.27■□□□□ 0.35
VPS45-211ENST00000535106 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.35
VPS45-211ENST00000535106 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
VPS45-211ENST00000535106 SAMD9Q5K651 1589 aa17.26■□□□□ 0.35
VPS45-211ENST00000535106 LRRIQ1Q96JM4 1722 aa17.24■□□□□ 0.35
VPS45-211ENST00000535106 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
VPS45-211ENST00000535106 PDS5BQ9NTI5 1447 aa17.22■□□□□ 0.35
VPS45-211ENST00000535106 NCOA2Q15596 1464 aa17.21■□□□□ 0.35
VPS45-211ENST00000535106 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.35
VPS45-211ENST00000535106 HFM1A2PYH4 1435 aa17.2■□□□□ 0.34
VPS45-211ENST00000535106 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
VPS45-211ENST00000535106 NAIPQ13075 1403 aa17.17■□□□□ 0.34
VPS45-211ENST00000535106 PTPN23Q9H3S7 1636 aa17.17■□□□□ 0.34
VPS45-211ENST00000535106 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
VPS45-211ENST00000535106 ANP32EQ9BTT0 268 aa17.16■□□□□ 0.34
VPS45-211ENST00000535106 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
VPS45-211ENST00000535106 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
VPS45-211ENST00000535106 TONSLQ96HA7 1378 aa17.14■□□□□ 0.34
VPS45-211ENST00000535106 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
VPS45-211ENST00000535106 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
VPS45-211ENST00000535106 SUPT6HQ7KZ85 1726 aaKnown RBP17.12■□□□□ 0.33
VPS45-211ENST00000535106 THOC2Q8NI27 1593 aaKnown RBP17.12■□□□□ 0.33
VPS45-211ENST00000535106 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
VPS45-211ENST00000535106 RRP7BPQ9NSQ0 103 aa17.11■□□□□ 0.33
VPS45-211ENST00000535106 CHIC2Q9UKJ5 165 aa17.11■□□□□ 0.33
VPS45-211ENST00000535106 ARHGEF11O15085 1522 aa17.1■□□□□ 0.33
VPS45-211ENST00000535106 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
VPS45-211ENST00000535106 ARID3CA6NKF2 412 aa17.07■□□□□ 0.32
VPS45-211ENST00000535106 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
VPS45-211ENST00000535106 ANP32CO43423 234 aa17.05■□□□□ 0.32
VPS45-211ENST00000535106 DENND4BO75064 1496 aaPredicted RBP17.04■□□□□ 0.32
VPS45-211ENST00000535106 EPRSP07814 1512 aaKnown RBP17.04■□□□□ 0.32
VPS45-211ENST00000535106 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
VPS45-211ENST00000535106 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
VPS45-211ENST00000535106 CDK13Q14004 1512 aaKnown RBP17.03■□□□□ 0.32
VPS45-211ENST00000535106 IQGAP2Q13576 1575 aa17.03■□□□□ 0.32
VPS45-211ENST00000535106 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
VPS45-211ENST00000535106 TRIM52Q96A61 297 aa17.02■□□□□ 0.31
VPS45-211ENST00000535106 KDM6BO15054 1643 aa17.01■□□□□ 0.31
VPS45-211ENST00000535106 HECW1Q76N89 1606 aa17.01■□□□□ 0.31
VPS45-211ENST00000535106 BCANQ96GW7 911 aa17■□□□□ 0.31
VPS45-211ENST00000535106 ADAMTS12P58397 1594 aa17■□□□□ 0.31
VPS45-211ENST00000535106 FKBP8Q14318 412 aa16.98■□□□□ 0.31
VPS45-211ENST00000535106 WDR62O43379 1518 aa16.97■□□□□ 0.31
VPS45-211ENST00000535106 FOXD1Q16676 465 aa16.96■□□□□ 0.31
VPS45-211ENST00000535106 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.3
VPS45-211ENST00000535106 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
VPS45-211ENST00000535106 MPHOSPH9Q99550 1183 aa16.95■□□□□ 0.3
VPS45-211ENST00000535106 MIA2Q96PC5 1412 aa16.95■□□□□ 0.3
VPS45-211ENST00000535106 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
VPS45-211ENST00000535106 HSPA5P11021 654 aaKnown RBP16.94■□□□□ 0.3
VPS45-211ENST00000535106 AKNAQ7Z591 1439 aa16.93■□□□□ 0.3
VPS45-211ENST00000535106 WASHC2AQ641Q2 1341 aa16.92■□□□□ 0.3
VPS45-211ENST00000535106 ZNF644Q9H582 1327 aaPredicted RBP16.92■□□□□ 0.3
VPS45-211ENST00000535106 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
VPS45-211ENST00000535106 DISP1Q96F81 1524 aa16.89■□□□□ 0.29
VPS45-211ENST00000535106 DAPK1P53355 1430 aa16.87■□□□□ 0.29
VPS45-211ENST00000535106 NUP153P49790 1475 aaKnown RBP16.86■□□□□ 0.29
VPS45-211ENST00000535106 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
VPS45-211ENST00000535106 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms