RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 PRXQ9BXM0 1461 aa22.89■■□□□ 1.26
TPBG-202ENST00000535040 ERICH3Q5RHP9 1530 aa22.88■■□□□ 1.25
TPBG-202ENST00000535040 DHX57Q6P158 1386 aaKnown RBP22.88■■□□□ 1.25
TPBG-202ENST00000535040 WDR62O43379 1518 aa22.87■■□□□ 1.25
TPBG-202ENST00000535040 ARAP1Q96P48 1450 aa22.86■■□□□ 1.25
TPBG-202ENST00000535040 CARMIL1Q5VZK9 1371 aa22.86■■□□□ 1.25
TPBG-202ENST00000535040 THOC2Q8NI27 1593 aaKnown RBP22.82■■□□□ 1.24
TPBG-202ENST00000535040 GAPVD1Q14C86 1478 aa22.81■■□□□ 1.24
TPBG-202ENST00000535040 WDR97A6NE52 1622 aa22.81■■□□□ 1.24
TPBG-202ENST00000535040 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
TPBG-202ENST00000535040 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.24
TPBG-202ENST00000535040 ZNF608Q9ULD9 1512 aaPredicted RBP22.75■■□□□ 1.23
TPBG-202ENST00000535040 IFT140Q96RY7 1462 aa22.75■■□□□ 1.23
TPBG-202ENST00000535040 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
TPBG-202ENST00000535040 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
TPBG-202ENST00000535040 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
TPBG-202ENST00000535040 CUL7Q14999 1698 aa22.65■■□□□ 1.22
TPBG-202ENST00000535040 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
TPBG-202ENST00000535040 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
TPBG-202ENST00000535040 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
TPBG-202ENST00000535040 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
TPBG-202ENST00000535040 ARHGAP35Q9NRY4 1499 aa22.58■■□□□ 1.21
TPBG-202ENST00000535040 CCNB3Q8WWL7 1395 aa22.58■■□□□ 1.2
TPBG-202ENST00000535040 FBLN2P98095 1184 aa22.55■■□□□ 1.2
TPBG-202ENST00000535040 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
TPBG-202ENST00000535040 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
TPBG-202ENST00000535040 FHAD1B1AJZ9 1412 aa22.52■■□□□ 1.2
TPBG-202ENST00000535040 ADAMTS12P58397 1594 aa22.49■■□□□ 1.19
TPBG-202ENST00000535040 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
TPBG-202ENST00000535040 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
TPBG-202ENST00000535040 RAB3GAP2Q9H2M9 1393 aa22.44■■□□□ 1.18
TPBG-202ENST00000535040 TIAM1Q13009 1591 aa22.43■■□□□ 1.18
TPBG-202ENST00000535040 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
TPBG-202ENST00000535040 MAP3K1Q13233 1512 aa22.42■■□□□ 1.18
TPBG-202ENST00000535040 ITGAEP38570 1179 aa22.4■■□□□ 1.18
TPBG-202ENST00000535040 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
TPBG-202ENST00000535040 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
TPBG-202ENST00000535040 FHOD3Q2V2M9 1422 aa22.36■■□□□ 1.17
TPBG-202ENST00000535040 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
TPBG-202ENST00000535040 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
TPBG-202ENST00000535040 TSHZ2Q9NRE2 1034 aa22.33■■□□□ 1.17
TPBG-202ENST00000535040 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.17
TPBG-202ENST00000535040 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
TPBG-202ENST00000535040 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
TPBG-202ENST00000535040 PHLDB1Q86UU1 1377 aa22.28■■□□□ 1.16
TPBG-202ENST00000535040 IQGAP2Q13576 1575 aa22.27■■□□□ 1.16
TPBG-202ENST00000535040 CFAP43Q8NDM7 1665 aa22.27■■□□□ 1.16
TPBG-202ENST00000535040 EFCAB5A4FU69 1503 aa22.25■■□□□ 1.15
TPBG-202ENST00000535040 SIN3AQ96ST3 1273 aa22.2■■□□□ 1.14
TPBG-202ENST00000535040 KIAA0586Q9BVV6 1533 aa22.2■■□□□ 1.14
TPBG-202ENST00000535040 PCF11O94913 1555 aaKnown RBP22.2■■□□□ 1.14
TPBG-202ENST00000535040 CEP170Q5SW79 1584 aa22.2■■□□□ 1.14
TPBG-202ENST00000535040 DDX10Q13206 875 aaKnown RBP22.18■■□□□ 1.14
TPBG-202ENST00000535040 PPP1R15AO75807 674 aaPredicted RBP22.16■■□□□ 1.14
TPBG-202ENST00000535040 SAMD9Q5K651 1589 aa22.16■■□□□ 1.14
TPBG-202ENST00000535040 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.13
TPBG-202ENST00000535040 TIMELESSQ9UNS1 1208 aa22.14■■□□□ 1.13
TPBG-202ENST00000535040 FMN1Q68DA7 1419 aa22.13■■□□□ 1.13
TPBG-202ENST00000535040 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
TPBG-202ENST00000535040 CHD1O14646 1710 aa22.11■■□□□ 1.13
TPBG-202ENST00000535040 NUP160Q12769 1436 aa22.11■■□□□ 1.13
TPBG-202ENST00000535040 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
TPBG-202ENST00000535040 UGGT2Q9NYU1 1516 aa22.08■■□□□ 1.13
TPBG-202ENST00000535040 FKBP8Q14318 412 aa22.07■■□□□ 1.12
TPBG-202ENST00000535040 BCANQ96GW7 911 aa22.07■■□□□ 1.12
TPBG-202ENST00000535040 ANP32EQ9BTT0 268 aa22.07■■□□□ 1.12
TPBG-202ENST00000535040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.06■■□□□ 1.12
TPBG-202ENST00000535040 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
TPBG-202ENST00000535040 FYCO1Q9BQS8 1478 aa22.05■■□□□ 1.12
TPBG-202ENST00000535040 DISP1Q96F81 1524 aa22.04■■□□□ 1.12
TPBG-202ENST00000535040 CCER2I3L3R5 266 aa22.04■■□□□ 1.12
TPBG-202ENST00000535040 KIAA0556O60303 1618 aa22.03■■□□□ 1.12
TPBG-202ENST00000535040 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
TPBG-202ENST00000535040 CARMIL2Q6F5E8 1435 aa21.99■■□□□ 1.11
TPBG-202ENST00000535040 ANP32CO43423 234 aa21.95■■□□□ 1.1
TPBG-202ENST00000535040 PRG4Q92954 1404 aaPredicted RBP21.95■■□□□ 1.1
TPBG-202ENST00000535040 FGD6Q6ZV73 1430 aa21.94■■□□□ 1.1
TPBG-202ENST00000535040 TRIM52Q96A61 297 aa21.93■■□□□ 1.1
TPBG-202ENST00000535040 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
TPBG-202ENST00000535040 CCDC18Q5T9S5 1454 aa21.92■■□□□ 1.1
TPBG-202ENST00000535040 NEFLP07196 543 aa21.91■■□□□ 1.1
TPBG-202ENST00000535040 TONSLQ96HA7 1378 aa21.89■■□□□ 1.09
TPBG-202ENST00000535040 PTPN23Q9H3S7 1636 aa21.89■■□□□ 1.09
TPBG-202ENST00000535040 HFM1A2PYH4 1435 aa21.88■■□□□ 1.09
TPBG-202ENST00000535040 PTPRKQ15262 1439 aa21.88■■□□□ 1.09
TPBG-202ENST00000535040 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
TPBG-202ENST00000535040 LRRIQ1Q96JM4 1722 aa21.88■■□□□ 1.09
TPBG-202ENST00000535040 UACAQ9BZF9 1416 aa21.88■■□□□ 1.09
TPBG-202ENST00000535040 CDK13Q14004 1512 aaKnown RBP21.88■■□□□ 1.09
TPBG-202ENST00000535040 PLB1Q6P1J6 1458 aa21.87■■□□□ 1.09
TPBG-202ENST00000535040 RBM19Q9Y4C8 960 aaKnown RBP21.84■■□□□ 1.09
TPBG-202ENST00000535040 KDM5BQ9UGL1 1544 aa21.84■■□□□ 1.09
TPBG-202ENST00000535040 EPRSP07814 1512 aaKnown RBP21.84■■□□□ 1.09
TPBG-202ENST00000535040 RAPGEF6Q8TEU7 1601 aa21.82■■□□□ 1.08
TPBG-202ENST00000535040 PTPRGP23470 1445 aa21.82■■□□□ 1.08
TPBG-202ENST00000535040 ERCC6L2Q5T890 1561 aa21.81■■□□□ 1.08
TPBG-202ENST00000535040 NAIPQ13075 1403 aa21.8■■□□□ 1.08
TPBG-202ENST00000535040 NUP153P49790 1475 aaKnown RBP21.8■■□□□ 1.08
TPBG-202ENST00000535040 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
TPBG-202ENST00000535040 MAGI3Q5TCQ9 1506 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms