RNA–Protein interactions for RNA: ENST00000534961.5

RNF170-209, Transcript of ring finger protein 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF170, Length 4,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-209ENST00000534961 ANP32CO43423 234 aa20.3■□□□□ 0.84
RNF170-209ENST00000534961 VPS8Q8N3P4 1428 aa20.26■□□□□ 0.83
RNF170-209ENST00000534961 RAPGEF2Q9Y4G8 1499 aa20.25■□□□□ 0.83
RNF170-209ENST00000534961 KANK4Q5T7N3 995 aaPredicted RBP20.25■□□□□ 0.83
RNF170-209ENST00000534961 STAG3Q9UJ98 1225 aa20.22■□□□□ 0.83
RNF170-209ENST00000534961 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
RNF170-209ENST00000534961 KDM2AQ9Y2K7 1162 aa20.2■□□□□ 0.82
RNF170-209ENST00000534961 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
RNF170-209ENST00000534961 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
RNF170-209ENST00000534961 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.82
RNF170-209ENST00000534961 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
RNF170-209ENST00000534961 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
RNF170-209ENST00000534961 DDX10Q13206 875 aaKnown RBP20.13■□□□□ 0.81
RNF170-209ENST00000534961 JPH4Q96JJ6 628 aa20.13■□□□□ 0.81
RNF170-209ENST00000534961 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
RNF170-209ENST00000534961 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
RNF170-209ENST00000534961 NESP48681 1621 aa20.12■□□□□ 0.81
RNF170-209ENST00000534961 FHOD3Q2V2M9 1422 aa20.12■□□□□ 0.81
RNF170-209ENST00000534961 IGF1RP08069 1367 aa20.1■□□□□ 0.81
RNF170-209ENST00000534961 CFTRP13569 1480 aa20.09■□□□□ 0.81
RNF170-209ENST00000534961 FMN1Q68DA7 1419 aa20.08■□□□□ 0.8
RNF170-209ENST00000534961 RGL3Q3MIN7 710 aa20.06■□□□□ 0.8
RNF170-209ENST00000534961 SENP3Q9H4L4 574 aaPredicted RBP20.04■□□□□ 0.8
RNF170-209ENST00000534961 ERICH6Q7L0X2 663 aa20.04■□□□□ 0.8
RNF170-209ENST00000534961 SIN3AQ96ST3 1273 aa20.03■□□□□ 0.8
RNF170-209ENST00000534961 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.8
RNF170-209ENST00000534961 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
RNF170-209ENST00000534961 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.79
RNF170-209ENST00000534961 ARHGAP35Q9NRY4 1499 aa19.96■□□□□ 0.79
RNF170-209ENST00000534961 ARID4BQ4LE39 1312 aaPredicted RBP19.93■□□□□ 0.78
RNF170-209ENST00000534961 SCAF1Q9H7N4 1312 aaKnown RBP19.93■□□□□ 0.78
RNF170-209ENST00000534961 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
RNF170-209ENST00000534961 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
RNF170-209ENST00000534961 ACIN1Q9UKV3 1341 aaKnown RBP19.88■□□□□ 0.77
RNF170-209ENST00000534961 TRHP20396 242 aaPredicted RBP19.87■□□□□ 0.77
RNF170-209ENST00000534961 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
RNF170-209ENST00000534961 EFCAB2Q5VUJ9 269 aa19.85■□□□□ 0.77
RNF170-209ENST00000534961 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
RNF170-209ENST00000534961 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.76
RNF170-209ENST00000534961 FAM9BQ8IZU0 186 aa19.82■□□□□ 0.76
RNF170-209ENST00000534961 PTPRGP23470 1445 aa19.82■□□□□ 0.76
RNF170-209ENST00000534961 MYT1Q01538 1121 aa19.82■□□□□ 0.76
RNF170-209ENST00000534961 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
RNF170-209ENST00000534961 CUX1P39880 1505 aa19.81■□□□□ 0.76
RNF170-209ENST00000534961 PPP1R15AO75807 674 aaPredicted RBP19.81■□□□□ 0.76
RNF170-209ENST00000534961 FOXD1Q16676 465 aa19.81■□□□□ 0.76
RNF170-209ENST00000534961 MIER1Q8N108 512 aa19.8■□□□□ 0.76
RNF170-209ENST00000534961 OSCARQ8IYS5 282 aa19.8■□□□□ 0.76
RNF170-209ENST00000534961 HNRNPMP52272 730 aaKnown RBP eCLIP19.8■□□□□ 0.76
RNF170-209ENST00000534961 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
RNF170-209ENST00000534961 MLECQ14165 292 aa19.78■□□□□ 0.76
RNF170-209ENST00000534961 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
RNF170-209ENST00000534961 NEFMP07197 916 aa19.78■□□□□ 0.76
RNF170-209ENST00000534961 GGT6Q6P531 493 aa19.78■□□□□ 0.76
RNF170-209ENST00000534961 RAB3GAP2Q9H2M9 1393 aa19.77■□□□□ 0.76
RNF170-209ENST00000534961 HNRNPUQ00839 825 aaKnown RBP eCLIP19.77■□□□□ 0.76
RNF170-209ENST00000534961 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
RNF170-209ENST00000534961 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
RNF170-209ENST00000534961 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
RNF170-209ENST00000534961 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
RNF170-209ENST00000534961 SLC24A1O60721 1099 aa19.75■□□□□ 0.75
RNF170-209ENST00000534961 PKD2Q13563 968 aa19.75■□□□□ 0.75
RNF170-209ENST00000534961 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
RNF170-209ENST00000534961 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
RNF170-209ENST00000534961 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
RNF170-209ENST00000534961 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
RNF170-209ENST00000534961 MRS2Q9HD23 443 aa19.71■□□□□ 0.75
RNF170-209ENST00000534961 DCAF11Q8TEB1 546 aa19.71■□□□□ 0.75
RNF170-209ENST00000534961 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
RNF170-209ENST00000534961 NUP155O75694 1391 aa19.68■□□□□ 0.74
RNF170-209ENST00000534961 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
RNF170-209ENST00000534961 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
RNF170-209ENST00000534961 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
RNF170-209ENST00000534961 KANK1Q14678 1352 aa19.64■□□□□ 0.74
RNF170-209ENST00000534961 KIF3BO15066 747 aa19.64■□□□□ 0.73
RNF170-209ENST00000534961 KIF21BO75037 1637 aa19.64■□□□□ 0.73
RNF170-209ENST00000534961 IFT140Q96RY7 1462 aa19.64■□□□□ 0.73
RNF170-209ENST00000534961 CANXP27824 592 aaKnown RBP19.63■□□□□ 0.73
RNF170-209ENST00000534961 SPAG9O60271 1321 aaKnown RBP19.63■□□□□ 0.73
RNF170-209ENST00000534961 DAXXQ9UER7 740 aaPredicted RBP19.62■□□□□ 0.73
RNF170-209ENST00000534961 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
RNF170-209ENST00000534961 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
RNF170-209ENST00000534961 TIMELESSQ9UNS1 1208 aa19.6■□□□□ 0.73
RNF170-209ENST00000534961 RSPH4AQ5TD94 716 aa19.6■□□□□ 0.73
RNF170-209ENST00000534961 ERICH3Q5RHP9 1530 aa19.58■□□□□ 0.73
RNF170-209ENST00000534961 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.73
RNF170-209ENST00000534961 ZNF644Q9H582 1327 aaPredicted RBP19.56■□□□□ 0.72
RNF170-209ENST00000534961 PLEKHG5O94827 1062 aa19.56■□□□□ 0.72
RNF170-209ENST00000534961 WDR43Q15061 677 aaKnown RBP eCLIP19.55■□□□□ 0.72
RNF170-209ENST00000534961 C14orf37Q86TY3 774 aa19.55■□□□□ 0.72
RNF170-209ENST00000534961 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
RNF170-209ENST00000534961 SENP3-EIF4A1A0A087X0R7 540 aa19.53■□□□□ 0.72
RNF170-209ENST00000534961 SNAPC4Q5SXM2 1469 aa19.53■□□□□ 0.72
RNF170-209ENST00000534961 CDCA8Q53HL2 280 aa19.52■□□□□ 0.72
RNF170-209ENST00000534961 POGKQ9P215 609 aa19.52■□□□□ 0.72
RNF170-209ENST00000534961 PHLDB1Q86UU1 1377 aa19.51■□□□□ 0.71
RNF170-209ENST00000534961 PRG4Q92954 1404 aaPredicted RBP19.5■□□□□ 0.71
RNF170-209ENST00000534961 ABCA10Q8WWZ4 1543 aa19.5■□□□□ 0.71
RNF170-209ENST00000534961 FKBP8Q14318 412 aa19.49■□□□□ 0.71
RNF170-209ENST00000534961 KNSTRNQ9Y448 316 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms