RNA–Protein interactions for RNA: ENST00000534790.5

PDZD3-214, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,652 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-214ENST00000534790 EFCAB5A4FU69 1503 aa24.73■■□□□ 1.55
PDZD3-214ENST00000534790 TOPBP1Q92547 1522 aa24.73■■□□□ 1.55
PDZD3-214ENST00000534790 CFAP43Q8NDM7 1665 aa24.73■■□□□ 1.55
PDZD3-214ENST00000534790 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
PDZD3-214ENST00000534790 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
PDZD3-214ENST00000534790 LRRC9Q6ZRR7 1453 aa24.65■■□□□ 1.54
PDZD3-214ENST00000534790 CTTNBP2Q8WZ74 1663 aa24.65■■□□□ 1.54
PDZD3-214ENST00000534790 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.54
PDZD3-214ENST00000534790 WDR97A6NE52 1622 aa24.62■■□□□ 1.53
PDZD3-214ENST00000534790 FYCO1Q9BQS8 1478 aa24.61■■□□□ 1.53
PDZD3-214ENST00000534790 MIER1Q8N108 512 aa24.6■■□□□ 1.53
PDZD3-214ENST00000534790 PCF11O94913 1555 aaKnown RBP24.57■■□□□ 1.52
PDZD3-214ENST00000534790 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
PDZD3-214ENST00000534790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.53■■□□□ 1.52
PDZD3-214ENST00000534790 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
PDZD3-214ENST00000534790 CASKIN1Q8WXD9 1431 aa24.53■■□□□ 1.52
PDZD3-214ENST00000534790 NESP48681 1621 aa24.53■■□□□ 1.52
PDZD3-214ENST00000534790 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
PDZD3-214ENST00000534790 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
PDZD3-214ENST00000534790 FMN1Q68DA7 1419 aa24.49■■□□□ 1.51
PDZD3-214ENST00000534790 SETD5Q9C0A6 1442 aa24.47■■□□□ 1.51
PDZD3-214ENST00000534790 RAB3GAP2Q9H2M9 1393 aa24.44■■□□□ 1.5
PDZD3-214ENST00000534790 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
PDZD3-214ENST00000534790 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
PDZD3-214ENST00000534790 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
PDZD3-214ENST00000534790 SAMD9Q5K651 1589 aa24.42■■□□□ 1.5
PDZD3-214ENST00000534790 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.5
PDZD3-214ENST00000534790 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
PDZD3-214ENST00000534790 GAPVD1Q14C86 1478 aa24.36■■□□□ 1.49
PDZD3-214ENST00000534790 TIMELESSQ9UNS1 1208 aa24.35■■□□□ 1.49
PDZD3-214ENST00000534790 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
PDZD3-214ENST00000534790 TARBP1Q13395 1621 aaKnown RBP24.29■■□□□ 1.48
PDZD3-214ENST00000534790 ITGAEP38570 1179 aa24.28■■□□□ 1.48
PDZD3-214ENST00000534790 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
PDZD3-214ENST00000534790 FAM50AQ14320 339 aaKnown RBP24.24■■□□□ 1.47
PDZD3-214ENST00000534790 P3H3Q8IVL6 736 aa24.23■■□□□ 1.47
PDZD3-214ENST00000534790 GRIN2BQ13224 1484 aa24.23■■□□□ 1.47
PDZD3-214ENST00000534790 EHBP1L1Q8N3D4 1523 aa24.22■■□□□ 1.47
PDZD3-214ENST00000534790 SUPT6HQ7KZ85 1726 aaKnown RBP24.22■■□□□ 1.47
PDZD3-214ENST00000534790 CCDC18Q5T9S5 1454 aa24.2■■□□□ 1.46
PDZD3-214ENST00000534790 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
PDZD3-214ENST00000534790 PBRM1Q86U86 1689 aa24.2■■□□□ 1.46
PDZD3-214ENST00000534790 MTUS2Q5JR59 1369 aa24.19■■□□□ 1.46
PDZD3-214ENST00000534790 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
PDZD3-214ENST00000534790 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
PDZD3-214ENST00000534790 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
PDZD3-214ENST00000534790 MYOM3Q5VTT5 1437 aa24.13■■□□□ 1.45
PDZD3-214ENST00000534790 HFM1A2PYH4 1435 aa24.13■■□□□ 1.45
PDZD3-214ENST00000534790 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
PDZD3-214ENST00000534790 NCOA2Q15596 1464 aa24.1■■□□□ 1.45
PDZD3-214ENST00000534790 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
PDZD3-214ENST00000534790 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
PDZD3-214ENST00000534790 IQGAP2Q13576 1575 aa24.09■■□□□ 1.45
PDZD3-214ENST00000534790 UGGT2Q9NYU1 1516 aa24.08■■□□□ 1.45
PDZD3-214ENST00000534790 PTPN23Q9H3S7 1636 aa24.08■■□□□ 1.44
PDZD3-214ENST00000534790 UACAQ9BZF9 1416 aa24.07■■□□□ 1.44
PDZD3-214ENST00000534790 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
PDZD3-214ENST00000534790 TCOF1Q13428 1488 aaKnown RBP24.03■■□□□ 1.44
PDZD3-214ENST00000534790 SUPT16HQ9Y5B9 1047 aaKnown RBP24.03■■□□□ 1.44
PDZD3-214ENST00000534790 WDR62O43379 1518 aa24.02■■□□□ 1.44
PDZD3-214ENST00000534790 AKNAQ7Z591 1439 aa24.01■■□□□ 1.43
PDZD3-214ENST00000534790 GCC2Q8IWJ2 1684 aa23.98■■□□□ 1.43
PDZD3-214ENST00000534790 NAIPQ13075 1403 aa23.96■■□□□ 1.43
PDZD3-214ENST00000534790 MIA2Q96PC5 1412 aa23.96■■□□□ 1.43
PDZD3-214ENST00000534790 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.42
PDZD3-214ENST00000534790 DNAJC5BQ9UF47 199 aa23.94■■□□□ 1.42
PDZD3-214ENST00000534790 EPRSP07814 1512 aaKnown RBP23.93■■□□□ 1.42
PDZD3-214ENST00000534790 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
PDZD3-214ENST00000534790 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
PDZD3-214ENST00000534790 TONSLQ96HA7 1378 aa23.91■■□□□ 1.42
PDZD3-214ENST00000534790 MAGI3Q5TCQ9 1506 aa23.9■■□□□ 1.42
PDZD3-214ENST00000534790 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
PDZD3-214ENST00000534790 KIAA0556O60303 1618 aa23.82■■□□□ 1.4
PDZD3-214ENST00000534790 CCER2I3L3R5 266 aa23.78■■□□□ 1.4
PDZD3-214ENST00000534790 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
PDZD3-214ENST00000534790 EIF4G3O43432 1585 aaKnown RBP23.76■■□□□ 1.39
PDZD3-214ENST00000534790 ROCK1Q13464 1354 aa23.76■■□□□ 1.39
PDZD3-214ENST00000534790 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
PDZD3-214ENST00000534790 TSHZ2Q9NRE2 1034 aa23.75■■□□□ 1.39
PDZD3-214ENST00000534790 RAPGEF6Q8TEU7 1601 aa23.74■■□□□ 1.39
PDZD3-214ENST00000534790 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
PDZD3-214ENST00000534790 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
PDZD3-214ENST00000534790 DISP1Q96F81 1524 aa23.73■■□□□ 1.39
PDZD3-214ENST00000534790 DDX10Q13206 875 aaKnown RBP23.72■■□□□ 1.39
PDZD3-214ENST00000534790 DNMT1P26358 1616 aaKnown RBP23.71■■□□□ 1.39
PDZD3-214ENST00000534790 KDM5BQ9UGL1 1544 aa23.7■■□□□ 1.38
PDZD3-214ENST00000534790 CDK11AQ9UQ88 783 aaPredicted RBP23.69■■□□□ 1.38
PDZD3-214ENST00000534790 ANP32CO43423 234 aa23.68■■□□□ 1.38
PDZD3-214ENST00000534790 KCNH8Q96L42 1107 aa23.68■■□□□ 1.38
PDZD3-214ENST00000534790 ITSN2Q9NZM3 1697 aa23.66■■□□□ 1.38
PDZD3-214ENST00000534790 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
PDZD3-214ENST00000534790 SYNJ2O15056 1496 aa23.65■■□□□ 1.38
PDZD3-214ENST00000534790 NUP153P49790 1475 aaKnown RBP23.65■■□□□ 1.38
PDZD3-214ENST00000534790 DAPK1P53355 1430 aa23.64■■□□□ 1.37
PDZD3-214ENST00000534790 ADCY10Q96PN6 1610 aa23.62■■□□□ 1.37
PDZD3-214ENST00000534790 DENND4BO75064 1496 aaPredicted RBP23.6■■□□□ 1.37
PDZD3-214ENST00000534790 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
PDZD3-214ENST00000534790 KDM6BO15054 1643 aa23.58■■□□□ 1.37
PDZD3-214ENST00000534790 ADGBQ8N7X0 1667 aa23.58■■□□□ 1.36
PDZD3-214ENST00000534790 TROQ12816 1431 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms