RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 RIMBP3BA6NNM3 1639 aa40.21■■■■■ 4.03
SIPA1-210ENST00000534406 RIMBP3Q9UFD9 1639 aa40.21■■■■■ 4.03
SIPA1-210ENST00000534406 KIAA0586Q9BVV6 1533 aa40.18■■■■■ 4.02
SIPA1-210ENST00000534406 SHROOM2Q13796 1616 aa40.18■■■■■ 4.02
SIPA1-210ENST00000534406 KIF21BO75037 1637 aa40.09■■■■■ 4.01
SIPA1-210ENST00000534406 IQGAP2Q13576 1575 aa40.06■■■■■ 4
SIPA1-210ENST00000534406 CTTNBP2Q8WZ74 1663 aa40.06■■■■■ 4
SIPA1-210ENST00000534406 JPH4Q96JJ6 628 aa39.99■■■■□ 3.99
SIPA1-210ENST00000534406 PRG4Q92954 1404 aaPredicted RBP39.96■■■■□ 3.99
SIPA1-210ENST00000534406 ERCC6L2Q5T890 1561 aa39.96■■■■□ 3.99
SIPA1-210ENST00000534406 ARAP1Q96P48 1450 aa39.94■■■■□ 3.98
SIPA1-210ENST00000534406 GOLGA3Q08378 1498 aa39.85■■■■□ 3.97
SIPA1-210ENST00000534406 UGGT2Q9NYU1 1516 aa39.83■■■■□ 3.97
SIPA1-210ENST00000534406 CARMIL2Q6F5E8 1435 aa39.75■■■■□ 3.95
SIPA1-210ENST00000534406 CYB5RLQ6IPT4 315 aa39.74■■■■□ 3.95
SIPA1-210ENST00000534406 DISP1Q96F81 1524 aa39.7■■■■□ 3.95
SIPA1-210ENST00000534406 KIAA0556O60303 1618 aa39.69■■■■□ 3.94
SIPA1-210ENST00000534406 EHMT2Q96KQ7 1210 aa39.67■■■■□ 3.94
SIPA1-210ENST00000534406 UBTFP17480 764 aaKnown RBP39.62■■■■□ 3.93
SIPA1-210ENST00000534406 TNIKQ9UKE5 1360 aa39.59■■■■□ 3.93
SIPA1-210ENST00000534406 SAMD9Q5K651 1589 aa39.53■■■■□ 3.92
SIPA1-210ENST00000534406 PTPRGP23470 1445 aa39.51■■■■□ 3.92
SIPA1-210ENST00000534406 EFCAB5A4FU69 1503 aa39.45■■■■□ 3.91
SIPA1-210ENST00000534406 TTBK1Q5TCY1 1321 aaPredicted RBP39.4■■■■□ 3.9
SIPA1-210ENST00000534406 RANGAP1P46060 587 aaPredicted RBP39.4■■■■□ 3.9
SIPA1-210ENST00000534406 ADCY10Q96PN6 1610 aa39.36■■■■□ 3.89
SIPA1-210ENST00000534406 P3H3Q8IVL6 736 aa39.31■■■■□ 3.88
SIPA1-210ENST00000534406 UACAQ9BZF9 1416 aa39.28■■■■□ 3.88
SIPA1-210ENST00000534406 FHOD3Q2V2M9 1422 aa39.27■■■■□ 3.88
SIPA1-210ENST00000534406 ABCC2Q92887 1545 aa39.25■■■■□ 3.87
SIPA1-210ENST00000534406 UHRF1BP1LA0JNW5 1464 aa39.24■■■■□ 3.87
SIPA1-210ENST00000534406 ARHGAP35Q9NRY4 1499 aa39.23■■■■□ 3.87
SIPA1-210ENST00000534406 PLB1Q6P1J6 1458 aa39.2■■■■□ 3.87
SIPA1-210ENST00000534406 ABCA8O94911 1581 aa39.2■■■■□ 3.87
SIPA1-210ENST00000534406 LOC105371045A0A1W2PR82 267 aa39.12■■■■□ 3.85
SIPA1-210ENST00000534406 CLIP1P30622 1438 aa39.12■■■■□ 3.85
SIPA1-210ENST00000534406 NPM1P06748 294 aaKnown RBP eCLIP39.1■■■■□ 3.85
SIPA1-210ENST00000534406 RAPGEF6Q8TEU7 1601 aa39.08■■■■□ 3.85
SIPA1-210ENST00000534406 MAPKBP1O60336 1514 aa39.04■■■■□ 3.84
SIPA1-210ENST00000534406 KDM5BQ9UGL1 1544 aa39.04■■■■□ 3.84
SIPA1-210ENST00000534406 CEP162Q5TB80 1403 aa39.04■■■■□ 3.84
SIPA1-210ENST00000534406 FMN1Q68DA7 1419 aa39.02■■■■□ 3.84
SIPA1-210ENST00000534406 ZCCHC11Q5TAX3 1644 aaKnown RBP39.01■■■■□ 3.84
SIPA1-210ENST00000534406 NUP153P49790 1475 aaKnown RBP38.91■■■■□ 3.82
SIPA1-210ENST00000534406 HECW1Q76N89 1606 aa38.85■■■■□ 3.81
SIPA1-210ENST00000534406 ASXL2Q76L83 1435 aa38.85■■■■□ 3.81
SIPA1-210ENST00000534406 TRHP20396 242 aaPredicted RBP38.83■■■■□ 3.81
SIPA1-210ENST00000534406 ATP10BO94823 1461 aa38.82■■■■□ 3.81
SIPA1-210ENST00000534406 PCF11O94913 1555 aaKnown RBP38.81■■■■□ 3.8
SIPA1-210ENST00000534406 ARID3CA6NKF2 412 aa38.8■■■■□ 3.8
SIPA1-210ENST00000534406 ABCC10Q5T3U5 1492 aa38.78■■■■□ 3.8
SIPA1-210ENST00000534406 DIP2BQ9P265 1576 aa38.78■■■■□ 3.8
SIPA1-210ENST00000534406 KIF13AQ9H1H9 1805 aa38.76■■■■□ 3.8
SIPA1-210ENST00000534406 WDR7Q9Y4E6 1490 aa38.74■■■■□ 3.79
SIPA1-210ENST00000534406 CASKIN1Q8WXD9 1431 aa38.74■■■■□ 3.79
SIPA1-210ENST00000534406 FYCO1Q9BQS8 1478 aa38.73■■■■□ 3.79
SIPA1-210ENST00000534406 EPRSP07814 1512 aaKnown RBP38.68■■■■□ 3.78
SIPA1-210ENST00000534406 CDK13Q14004 1512 aaKnown RBP38.68■■■■□ 3.78
SIPA1-210ENST00000534406 ATP1B4Q9UN42 357 aaPredicted RBP38.68■■■■□ 3.78
SIPA1-210ENST00000534406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.66■■■■□ 3.78
SIPA1-210ENST00000534406 HNRNPUL2Q1KMD3 747 aaKnown RBP38.66■■■■□ 3.78
SIPA1-210ENST00000534406 LRRIQ1Q96JM4 1722 aa38.63■■■■□ 3.78
SIPA1-210ENST00000534406 FAM69CQ0P6D2 419 aa38.61■■■■□ 3.77
SIPA1-210ENST00000534406 GLI2P10070 1586 aa38.61■■■■□ 3.77
SIPA1-210ENST00000534406 CCDC18Q5T9S5 1454 aa38.6■■■■□ 3.77
SIPA1-210ENST00000534406 VPS8Q8N3P4 1428 aa38.55■■■■□ 3.76
SIPA1-210ENST00000534406 PLEKHD1A6NEE1 506 aa38.48■■■■□ 3.75
SIPA1-210ENST00000534406 MAP3K4Q9Y6R4 1608 aa38.46■■■■□ 3.75
SIPA1-210ENST00000534406 KCNH8Q96L42 1107 aa38.46■■■■□ 3.75
SIPA1-210ENST00000534406 CFAP43Q8NDM7 1665 aa38.43■■■■□ 3.74
SIPA1-210ENST00000534406 CDK11AQ9UQ88 783 aaPredicted RBP38.43■■■■□ 3.74
SIPA1-210ENST00000534406 TSPOAP1O95153 1857 aa38.43■■■■□ 3.74
SIPA1-210ENST00000534406 ABCA9Q8IUA7 1624 aa38.4■■■■□ 3.74
SIPA1-210ENST00000534406 TROQ12816 1431 aaPredicted RBP38.38■■■■□ 3.73
SIPA1-210ENST00000534406 PPRC1Q5VV67 1664 aaKnown RBP38.34■■■■□ 3.73
SIPA1-210ENST00000534406 KIF14Q15058 1648 aa38.32■■■■□ 3.73
SIPA1-210ENST00000534406 MAGI3Q5TCQ9 1506 aa38.31■■■■□ 3.72
SIPA1-210ENST00000534406 CD109Q6YHK3 1445 aa38.3■■■■□ 3.72
SIPA1-210ENST00000534406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.28■■■■□ 3.72
SIPA1-210ENST00000534406 TTC37Q6PGP7 1564 aa38.27■■■■□ 3.72
SIPA1-210ENST00000534406 TEX14Q8IWB6 1497 aa38.26■■■■□ 3.72
SIPA1-210ENST00000534406 TIAM1Q13009 1591 aa38.25■■■■□ 3.71
SIPA1-210ENST00000534406 EHBP1L1Q8N3D4 1523 aa38.2■■■■□ 3.71
SIPA1-210ENST00000534406 MTUS2Q5JR59 1369 aa38.19■■■■□ 3.7
SIPA1-210ENST00000534406 MAP3K1Q13233 1512 aa38.17■■■■□ 3.7
SIPA1-210ENST00000534406 MYO5CQ9NQX4 1742 aa38.12■■■■□ 3.69
SIPA1-210ENST00000534406 KDM6BO15054 1643 aa38.06■■■■□ 3.68
SIPA1-210ENST00000534406 CFAP74Q9C0B2 1584 aa38.05■■■■□ 3.68
SIPA1-210ENST00000534406 LRRC9Q6ZRR7 1453 aa38.04■■■■□ 3.68
SIPA1-210ENST00000534406 ARAP3Q8WWN8 1544 aa38.04■■■■□ 3.68
SIPA1-210ENST00000534406 APLP2Q06481 763 aa38.04■■■■□ 3.68
SIPA1-210ENST00000534406 PLCH2O75038 1416 aa38.03■■■■□ 3.68
SIPA1-210ENST00000534406 NEO1Q92859 1461 aa38.03■■■■□ 3.68
SIPA1-210ENST00000534406 SUPT6HQ7KZ85 1726 aaKnown RBP38.01■■■■□ 3.67
SIPA1-210ENST00000534406 FANCAO15360 1455 aa38■■■■□ 3.67
SIPA1-210ENST00000534406 PREX2Q70Z35 1606 aa38■■■■□ 3.67
SIPA1-210ENST00000534406 CDC42BPAQ5VT25 1732 aa37.98■■■■□ 3.67
SIPA1-210ENST00000534406 PHLDB1Q86UU1 1377 aa37.96■■■■□ 3.67
SIPA1-210ENST00000534406 ARHGAP5Q13017 1502 aa37.95■■■■□ 3.67
SIPA1-210ENST00000534406 CDC42BPBQ9Y5S2 1711 aa37.93■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms