RNA–Protein interactions for RNA: ENST00000533649.1

DNHD1-219, Transcript of dynein heavy chain domain 1, humanhuman

TSL 1 (best)

Gene DNHD1, Length 2,557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNHD1-219ENST00000533649 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
DNHD1-219ENST00000533649 URB2Q14146 1524 aaKnown RBP16.59■□□□□ 0.25
DNHD1-219ENST00000533649 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.25
DNHD1-219ENST00000533649 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
DNHD1-219ENST00000533649 P3H3Q8IVL6 736 aa16.57■□□□□ 0.24
DNHD1-219ENST00000533649 CCNB3Q8WWL7 1395 aa16.56■□□□□ 0.24
DNHD1-219ENST00000533649 WDR97A6NE52 1622 aa16.51■□□□□ 0.23
DNHD1-219ENST00000533649 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
DNHD1-219ENST00000533649 CLSPNQ9HAW4 1339 aa16.5■□□□□ 0.23
DNHD1-219ENST00000533649 ATP1B4Q9UN42 357 aaPredicted RBP16.49■□□□□ 0.23
DNHD1-219ENST00000533649 CUL7Q14999 1698 aa16.48■□□□□ 0.23
DNHD1-219ENST00000533649 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
DNHD1-219ENST00000533649 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
DNHD1-219ENST00000533649 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
DNHD1-219ENST00000533649 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
DNHD1-219ENST00000533649 FAM50AQ14320 339 aaKnown RBP16.42■□□□□ 0.22
DNHD1-219ENST00000533649 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
DNHD1-219ENST00000533649 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
DNHD1-219ENST00000533649 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
DNHD1-219ENST00000533649 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
DNHD1-219ENST00000533649 TDRD9Q8NDG6 1382 aaKnown RBP16.39■□□□□ 0.21
DNHD1-219ENST00000533649 MRC2Q9UBG0 1479 aa16.38■□□□□ 0.21
DNHD1-219ENST00000533649 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
DNHD1-219ENST00000533649 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
DNHD1-219ENST00000533649 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
DNHD1-219ENST00000533649 EFCAB5A4FU69 1503 aa16.34■□□□□ 0.21
DNHD1-219ENST00000533649 MAPKBP1O60336 1514 aa16.34■□□□□ 0.21
DNHD1-219ENST00000533649 CTTNBP2Q8WZ74 1663 aa16.33■□□□□ 0.21
DNHD1-219ENST00000533649 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.21
DNHD1-219ENST00000533649 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
DNHD1-219ENST00000533649 WDR62O43379 1518 aa16.29■□□□□ 0.2
DNHD1-219ENST00000533649 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
DNHD1-219ENST00000533649 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■□□□ 13.1
DNHD1-219ENST00000533649 IFT140Q96RY7 1462 aa16.25■□□□□ 0.19
DNHD1-219ENST00000533649 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
DNHD1-219ENST00000533649 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
DNHD1-219ENST00000533649 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
DNHD1-219ENST00000533649 CFAP43Q8NDM7 1665 aa16.23■□□□□ 0.19
DNHD1-219ENST00000533649 HIRIP3Q9BW71 556 aaPredicted RBP16.22■□□□□ 0.19
DNHD1-219ENST00000533649 SAMD9Q5K651 1589 aa16.22■□□□□ 0.19
DNHD1-219ENST00000533649 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
DNHD1-219ENST00000533649 FMN1Q68DA7 1419 aa16.2■□□□□ 0.18
DNHD1-219ENST00000533649 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
DNHD1-219ENST00000533649 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
DNHD1-219ENST00000533649 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
DNHD1-219ENST00000533649 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
DNHD1-219ENST00000533649 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
DNHD1-219ENST00000533649 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
DNHD1-219ENST00000533649 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
DNHD1-219ENST00000533649 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
DNHD1-219ENST00000533649 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
DNHD1-219ENST00000533649 PPP1R15AO75807 674 aaPredicted RBP16.11■□□□□ 0.17
DNHD1-219ENST00000533649 IQGAP2Q13576 1575 aa16.1■□□□□ 0.17
DNHD1-219ENST00000533649 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
DNHD1-219ENST00000533649 ARID3CA6NKF2 412 aa16.09■□□□□ 0.17
DNHD1-219ENST00000533649 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
DNHD1-219ENST00000533649 SUPT16HQ9Y5B9 1047 aaKnown RBP16.08■□□□□ 0.16
DNHD1-219ENST00000533649 LRRIQ1Q96JM4 1722 aa16.07■□□□□ 0.16
DNHD1-219ENST00000533649 NCOA2Q15596 1464 aa16.07■□□□□ 0.16
DNHD1-219ENST00000533649 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
DNHD1-219ENST00000533649 CCDC18Q5T9S5 1454 aa16.05■□□□□ 0.16
DNHD1-219ENST00000533649 UGGT2Q9NYU1 1516 aa16.05■□□□□ 0.16
DNHD1-219ENST00000533649 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
DNHD1-219ENST00000533649 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
DNHD1-219ENST00000533649 KIAA0586Q9BVV6 1533 aa16.03■□□□□ 0.16
DNHD1-219ENST00000533649 MYOM3Q5VTT5 1437 aa16.03■□□□□ 0.16
DNHD1-219ENST00000533649 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
DNHD1-219ENST00000533649 HFM1A2PYH4 1435 aa16.02■□□□□ 0.16
DNHD1-219ENST00000533649 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.16
DNHD1-219ENST00000533649 GRIN2AQ12879 1464 aa16.02■□□□□ 0.16
DNHD1-219ENST00000533649 NAIPQ13075 1403 aa16.02■□□□□ 0.15
DNHD1-219ENST00000533649 TONSLQ96HA7 1378 aa16.01■□□□□ 0.15
DNHD1-219ENST00000533649 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
DNHD1-219ENST00000533649 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
DNHD1-219ENST00000533649 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
DNHD1-219ENST00000533649 HECW1Q76N89 1606 aa15.96■□□□□ 0.15
DNHD1-219ENST00000533649 EHBP1L1Q8N3D4 1523 aa15.96■□□□□ 0.15
DNHD1-219ENST00000533649 DISP1Q96F81 1524 aa15.94■□□□□ 0.14
DNHD1-219ENST00000533649 SUPT6HQ7KZ85 1726 aaKnown RBP15.93■□□□□ 0.14
DNHD1-219ENST00000533649 KIAA0556O60303 1618 aa15.93■□□□□ 0.14
DNHD1-219ENST00000533649 TRIM52Q96A61 297 aa15.93■□□□□ 0.14
DNHD1-219ENST00000533649 CDK13Q14004 1512 aaKnown RBP15.93■□□□□ 0.14
DNHD1-219ENST00000533649 CHMP7Q8WUX9 453 aaPredicted RBP15.92■□□□□ 0.14
DNHD1-219ENST00000533649 ARHGEF11O15085 1522 aa15.92■□□□□ 0.14
DNHD1-219ENST00000533649 EPRSP07814 1512 aaKnown RBP15.92■□□□□ 0.14
DNHD1-219ENST00000533649 FOXD1Q16676 465 aa15.91■□□□□ 0.14
DNHD1-219ENST00000533649 BCANQ96GW7 911 aa15.9■□□□□ 0.14
DNHD1-219ENST00000533649 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
DNHD1-219ENST00000533649 ANP32CO43423 234 aa15.9■□□□□ 0.14
DNHD1-219ENST00000533649 NUP160Q12769 1436 aa15.89■□□□□ 0.13
DNHD1-219ENST00000533649 DENND4BO75064 1496 aaPredicted RBP15.89■□□□□ 0.13
DNHD1-219ENST00000533649 KDM5BQ9UGL1 1544 aa15.87■□□□□ 0.13
DNHD1-219ENST00000533649 KDM6BO15054 1643 aa15.87■□□□□ 0.13
DNHD1-219ENST00000533649 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
DNHD1-219ENST00000533649 TCOF1Q13428 1488 aaKnown RBP15.84■□□□□ 0.13
DNHD1-219ENST00000533649 FKBP8Q14318 412 aa15.84■□□□□ 0.13
DNHD1-219ENST00000533649 MPHOSPH9Q99550 1183 aa15.84■□□□□ 0.13
DNHD1-219ENST00000533649 CCER2I3L3R5 266 aa15.83■□□□□ 0.12
DNHD1-219ENST00000533649 RAPGEF6Q8TEU7 1601 aa15.82■□□□□ 0.12
DNHD1-219ENST00000533649 HSPA5P11021 654 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms