RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 CTTNBP2Q8WZ74 1663 aa18.33■□□□□ 0.52
GMDS-210ENST00000533279 CEP170Q5SW79 1584 aa18.32■□□□□ 0.52
GMDS-210ENST00000533279 KIAA0586Q9BVV6 1533 aa18.32■□□□□ 0.52
GMDS-210ENST00000533279 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
GMDS-210ENST00000533279 TNIKQ9UKE5 1360 aa18.29■□□□□ 0.52
GMDS-210ENST00000533279 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
GMDS-210ENST00000533279 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
GMDS-210ENST00000533279 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
GMDS-210ENST00000533279 CARMIL2Q6F5E8 1435 aa18.21■□□□□ 0.51
GMDS-210ENST00000533279 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
GMDS-210ENST00000533279 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
GMDS-210ENST00000533279 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
GMDS-210ENST00000533279 UGGT2Q9NYU1 1516 aa18.17■□□□□ 0.5
GMDS-210ENST00000533279 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
GMDS-210ENST00000533279 CLIP1P30622 1438 aa18.15■□□□□ 0.5
GMDS-210ENST00000533279 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
GMDS-210ENST00000533279 SHROOM2Q13796 1616 aa18.14■□□□□ 0.49
GMDS-210ENST00000533279 PRG4Q92954 1404 aaPredicted RBP18.14■□□□□ 0.49
GMDS-210ENST00000533279 KIAA0556O60303 1618 aa18.09■□□□□ 0.49
GMDS-210ENST00000533279 SAMD9Q5K651 1589 aa18.08■□□□□ 0.48
GMDS-210ENST00000533279 DISP1Q96F81 1524 aa18.04■□□□□ 0.48
GMDS-210ENST00000533279 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
GMDS-210ENST00000533279 ARHGAP35Q9NRY4 1499 aa18.03■□□□□ 0.48
GMDS-210ENST00000533279 ARHGEF11O15085 1522 aa18.02■□□□□ 0.47
GMDS-210ENST00000533279 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
GMDS-210ENST00000533279 FHOD3Q2V2M9 1422 aa18.01■□□□□ 0.47
GMDS-210ENST00000533279 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
GMDS-210ENST00000533279 PTPRGP23470 1445 aa17.99■□□□□ 0.47
GMDS-210ENST00000533279 RIMBP3CA6NJZ7 1639 aa17.96■□□□□ 0.47
GMDS-210ENST00000533279 RIMBP3BA6NNM3 1639 aa17.96■□□□□ 0.47
GMDS-210ENST00000533279 RIMBP3Q9UFD9 1639 aa17.96■□□□□ 0.47
GMDS-210ENST00000533279 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.46
GMDS-210ENST00000533279 ARAP1Q96P48 1450 aa17.94■□□□□ 0.46
GMDS-210ENST00000533279 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
GMDS-210ENST00000533279 VPS8Q8N3P4 1428 aa17.9■□□□□ 0.46
GMDS-210ENST00000533279 ATP1B4Q9UN42 357 aaPredicted RBP17.9■□□□□ 0.46
GMDS-210ENST00000533279 UACAQ9BZF9 1416 aa17.89■□□□□ 0.45
GMDS-210ENST00000533279 APLP2Q06481 763 aa17.88■□□□□ 0.45
GMDS-210ENST00000533279 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
GMDS-210ENST00000533279 FYCO1Q9BQS8 1478 aa17.87■□□□□ 0.45
GMDS-210ENST00000533279 HECW1Q76N89 1606 aa17.87■□□□□ 0.45
GMDS-210ENST00000533279 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
GMDS-210ENST00000533279 CASKIN1Q8WXD9 1431 aa17.85■□□□□ 0.45
GMDS-210ENST00000533279 NPM1P06748 294 aaKnown RBP eCLIP17.84■□□□□ 0.45
GMDS-210ENST00000533279 PCF11O94913 1555 aaKnown RBP17.83■□□□□ 0.45
GMDS-210ENST00000533279 ABCC2Q92887 1545 aa17.83■□□□□ 0.45
GMDS-210ENST00000533279 PLB1Q6P1J6 1458 aa17.83■□□□□ 0.45
GMDS-210ENST00000533279 ABCA8O94911 1581 aa17.83■□□□□ 0.44
GMDS-210ENST00000533279 UHRF1BP1LA0JNW5 1464 aa17.82■□□□□ 0.44
GMDS-210ENST00000533279 CCDC18Q5T9S5 1454 aa17.82■□□□□ 0.44
GMDS-210ENST00000533279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
GMDS-210ENST00000533279 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
GMDS-210ENST00000533279 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
GMDS-210ENST00000533279 NUP153P49790 1475 aaKnown RBP17.75■□□□□ 0.43
GMDS-210ENST00000533279 ADCY10Q96PN6 1610 aa17.75■□□□□ 0.43
GMDS-210ENST00000533279 EPRSP07814 1512 aaKnown RBP17.73■□□□□ 0.43
GMDS-210ENST00000533279 ARID3CA6NKF2 412 aa17.73■□□□□ 0.43
GMDS-210ENST00000533279 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
GMDS-210ENST00000533279 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
GMDS-210ENST00000533279 ZCCHC11Q5TAX3 1644 aaKnown RBP17.69■□□□□ 0.42
GMDS-210ENST00000533279 MTUS2Q5JR59 1369 aa17.68■□□□□ 0.42
GMDS-210ENST00000533279 PLEKHD1A6NEE1 506 aa17.68■□□□□ 0.42
GMDS-210ENST00000533279 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
GMDS-210ENST00000533279 CDK13Q14004 1512 aaKnown RBP17.67■□□□□ 0.42
GMDS-210ENST00000533279 TIAM1Q13009 1591 aa17.67■□□□□ 0.42
GMDS-210ENST00000533279 ATP10BO94823 1461 aa17.67■□□□□ 0.42
GMDS-210ENST00000533279 EHBP1L1Q8N3D4 1523 aa17.62■□□□□ 0.41
GMDS-210ENST00000533279 MAPKBP1O60336 1514 aa17.62■□□□□ 0.41
GMDS-210ENST00000533279 WDR7Q9Y4E6 1490 aa17.61■□□□□ 0.41
GMDS-210ENST00000533279 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
GMDS-210ENST00000533279 ASXL2Q76L83 1435 aa17.6■□□□□ 0.41
GMDS-210ENST00000533279 LRRIQ1Q96JM4 1722 aa17.6■□□□□ 0.41
GMDS-210ENST00000533279 KIF14Q15058 1648 aa17.58■□□□□ 0.41
GMDS-210ENST00000533279 LRRC9Q6ZRR7 1453 aa17.58■□□□□ 0.41
GMDS-210ENST00000533279 SUPT6HQ7KZ85 1726 aaKnown RBP17.55■□□□□ 0.4
GMDS-210ENST00000533279 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
GMDS-210ENST00000533279 KANK4Q5T7N3 995 aaPredicted RBP17.49■□□□□ 0.39
GMDS-210ENST00000533279 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
GMDS-210ENST00000533279 MAGI3Q5TCQ9 1506 aa17.48■□□□□ 0.39
GMDS-210ENST00000533279 ABCC10Q5T3U5 1492 aa17.47■□□□□ 0.39
GMDS-210ENST00000533279 NCOA2Q15596 1464 aa17.46■□□□□ 0.39
GMDS-210ENST00000533279 FAM69CQ0P6D2 419 aa17.46■□□□□ 0.39
GMDS-210ENST00000533279 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
GMDS-210ENST00000533279 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
GMDS-210ENST00000533279 ITSN2Q9NZM3 1697 aa17.44■□□□□ 0.38
GMDS-210ENST00000533279 GLI2P10070 1586 aa17.44■□□□□ 0.38
GMDS-210ENST00000533279 DIP2BQ9P265 1576 aa17.44■□□□□ 0.38
GMDS-210ENST00000533279 ABCA9Q8IUA7 1624 aa17.43■□□□□ 0.38
GMDS-210ENST00000533279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.42■□□□□ 0.38
GMDS-210ENST00000533279 CD109Q6YHK3 1445 aa17.41■□□□□ 0.38
GMDS-210ENST00000533279 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
GMDS-210ENST00000533279 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
GMDS-210ENST00000533279 MYOM3Q5VTT5 1437 aa17.39■□□□□ 0.38
GMDS-210ENST00000533279 ARHGAP5Q13017 1502 aa17.39■□□□□ 0.37
GMDS-210ENST00000533279 CFDP1Q9UEE9 299 aaPredicted RBP17.38■□□□□ 0.37
GMDS-210ENST00000533279 TEX14Q8IWB6 1497 aa17.37■□□□□ 0.37
GMDS-210ENST00000533279 CFAP74Q9C0B2 1584 aa17.37■□□□□ 0.37
GMDS-210ENST00000533279 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
GMDS-210ENST00000533279 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
GMDS-210ENST00000533279 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms