RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 FHOD3Q2V2M9 1422 aa22.75■■□□□ 1.23
CACNA1E-208ENST00000533229 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
CACNA1E-208ENST00000533229 ITGAEP38570 1179 aa22.73■■□□□ 1.23
CACNA1E-208ENST00000533229 CUL7Q14999 1698 aa22.73■■□□□ 1.23
CACNA1E-208ENST00000533229 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
CACNA1E-208ENST00000533229 CLSPNQ9HAW4 1339 aa22.72■■□□□ 1.23
CACNA1E-208ENST00000533229 PCF11O94913 1555 aaKnown RBP22.7■■□□□ 1.22
CACNA1E-208ENST00000533229 PHLDB1Q86UU1 1377 aa22.69■■□□□ 1.22
CACNA1E-208ENST00000533229 ATP1B4Q9UN42 357 aaPredicted RBP22.69■■□□□ 1.22
CACNA1E-208ENST00000533229 SCAF1Q9H7N4 1312 aaKnown RBP22.68■■□□□ 1.22
CACNA1E-208ENST00000533229 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
CACNA1E-208ENST00000533229 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
CACNA1E-208ENST00000533229 EFCAB5A4FU69 1503 aa22.65■■□□□ 1.22
CACNA1E-208ENST00000533229 KIF21AQ7Z4S6 1674 aa22.64■■□□□ 1.21
CACNA1E-208ENST00000533229 CASKIN1Q8WXD9 1431 aa22.62■■□□□ 1.21
CACNA1E-208ENST00000533229 FYCO1Q9BQS8 1478 aa22.61■■□□□ 1.21
CACNA1E-208ENST00000533229 CFAP43Q8NDM7 1665 aa22.6■■□□□ 1.21
CACNA1E-208ENST00000533229 CTTNBP2Q8WZ74 1663 aa22.6■■□□□ 1.21
CACNA1E-208ENST00000533229 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
CACNA1E-208ENST00000533229 RAB3GAP2Q9H2M9 1393 aa22.58■■□□□ 1.21
CACNA1E-208ENST00000533229 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
CACNA1E-208ENST00000533229 TARBP1Q13395 1621 aaKnown RBP22.55■■□□□ 1.2
CACNA1E-208ENST00000533229 FAM50AQ14320 339 aaKnown RBP22.55■■□□□ 1.2
CACNA1E-208ENST00000533229 ACIN1Q9UKV3 1341 aaKnown RBP22.55■■□□□ 1.2
CACNA1E-208ENST00000533229 FMN1Q68DA7 1419 aa22.55■■□□□ 1.2
CACNA1E-208ENST00000533229 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
CACNA1E-208ENST00000533229 MIER1Q8N108 512 aa22.51■■□□□ 1.19
CACNA1E-208ENST00000533229 SETD5Q9C0A6 1442 aa22.5■■□□□ 1.19
CACNA1E-208ENST00000533229 SAMD9Q5K651 1589 aa22.49■■□□□ 1.19
CACNA1E-208ENST00000533229 MAPKBP1O60336 1514 aa22.45■■□□□ 1.18
CACNA1E-208ENST00000533229 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
CACNA1E-208ENST00000533229 CENPBP07199 599 aaPredicted RBP22.42■■□□□ 1.18
CACNA1E-208ENST00000533229 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
CACNA1E-208ENST00000533229 MTUS2Q5JR59 1369 aa22.4■■□□□ 1.18
CACNA1E-208ENST00000533229 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.4■■□□□ 1.18
CACNA1E-208ENST00000533229 FGD6Q6ZV73 1430 aa22.38■■□□□ 1.17
CACNA1E-208ENST00000533229 LRRIQ1Q96JM4 1722 aa22.36■■□□□ 1.17
CACNA1E-208ENST00000533229 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
CACNA1E-208ENST00000533229 YTHDC1Q96MU7 727 aaKnown RBP22.34■■□□□ 1.17
CACNA1E-208ENST00000533229 ZNF608Q9ULD9 1512 aaPredicted RBP22.33■■□□□ 1.16
CACNA1E-208ENST00000533229 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
CACNA1E-208ENST00000533229 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
CACNA1E-208ENST00000533229 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
CACNA1E-208ENST00000533229 PTPRKQ15262 1439 aa22.3■■□□□ 1.16
CACNA1E-208ENST00000533229 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
CACNA1E-208ENST00000533229 IQGAP2Q13576 1575 aa22.27■■□□□ 1.16
CACNA1E-208ENST00000533229 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
CACNA1E-208ENST00000533229 IFT140Q96RY7 1462 aa22.27■■□□□ 1.16
CACNA1E-208ENST00000533229 MAGI3Q5TCQ9 1506 aa22.27■■□□□ 1.16
CACNA1E-208ENST00000533229 MYOM3Q5VTT5 1437 aa22.26■■□□□ 1.15
CACNA1E-208ENST00000533229 WDR62O43379 1518 aa22.25■■□□□ 1.15
CACNA1E-208ENST00000533229 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
CACNA1E-208ENST00000533229 EHBP1L1Q8N3D4 1523 aa22.23■■□□□ 1.15
CACNA1E-208ENST00000533229 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
CACNA1E-208ENST00000533229 CCDC18Q5T9S5 1454 aa22.2■■□□□ 1.14
CACNA1E-208ENST00000533229 HFM1A2PYH4 1435 aa22.19■■□□□ 1.14
CACNA1E-208ENST00000533229 UGGT2Q9NYU1 1516 aa22.19■■□□□ 1.14
CACNA1E-208ENST00000533229 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
CACNA1E-208ENST00000533229 EPRSP07814 1512 aaKnown RBP22.18■■□□□ 1.14
CACNA1E-208ENST00000533229 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
CACNA1E-208ENST00000533229 HECW1Q76N89 1606 aa22.15■■□□□ 1.14
CACNA1E-208ENST00000533229 NAIPQ13075 1403 aa22.14■■□□□ 1.14
CACNA1E-208ENST00000533229 CDK13Q14004 1512 aaKnown RBP22.14■■□□□ 1.14
CACNA1E-208ENST00000533229 KIAA0586Q9BVV6 1533 aa22.13■■□□□ 1.13
CACNA1E-208ENST00000533229 TIMELESSQ9UNS1 1208 aa22.12■■□□□ 1.13
CACNA1E-208ENST00000533229 PTPN23Q9H3S7 1636 aa22.12■■□□□ 1.13
CACNA1E-208ENST00000533229 DISP1Q96F81 1524 aa22.11■■□□□ 1.13
CACNA1E-208ENST00000533229 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
CACNA1E-208ENST00000533229 UACAQ9BZF9 1416 aa22.1■■□□□ 1.13
CACNA1E-208ENST00000533229 EIF4G3O43432 1585 aaKnown RBP22.1■■□□□ 1.13
CACNA1E-208ENST00000533229 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
CACNA1E-208ENST00000533229 PPP1R15AO75807 674 aaPredicted RBP22.08■■□□□ 1.13
CACNA1E-208ENST00000533229 TCOF1Q13428 1488 aaKnown RBP22.07■■□□□ 1.12
CACNA1E-208ENST00000533229 CHIC2Q9UKJ5 165 aa22.06■■□□□ 1.12
CACNA1E-208ENST00000533229 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
CACNA1E-208ENST00000533229 KIAA0556O60303 1618 aa22.05■■□□□ 1.12
CACNA1E-208ENST00000533229 NUP153P49790 1475 aaKnown RBP22.01■■□□□ 1.11
CACNA1E-208ENST00000533229 MIA2Q96PC5 1412 aa22.01■■□□□ 1.11
CACNA1E-208ENST00000533229 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
CACNA1E-208ENST00000533229 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
CACNA1E-208ENST00000533229 HIRIP3Q9BW71 556 aaPredicted RBP21.97■■□□□ 1.11
CACNA1E-208ENST00000533229 FBLN2P98095 1184 aa21.97■■□□□ 1.11
CACNA1E-208ENST00000533229 TONSLQ96HA7 1378 aa21.97■■□□□ 1.11
CACNA1E-208ENST00000533229 SYNJ2O15056 1496 aa21.95■■□□□ 1.11
CACNA1E-208ENST00000533229 CEP170Q5SW79 1584 aa21.95■■□□□ 1.1
CACNA1E-208ENST00000533229 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
CACNA1E-208ENST00000533229 DENND4BO75064 1496 aaPredicted RBP21.93■■□□□ 1.1
CACNA1E-208ENST00000533229 AKNAQ7Z591 1439 aa21.92■■□□□ 1.1
CACNA1E-208ENST00000533229 KDM6BO15054 1643 aa21.92■■□□□ 1.1
CACNA1E-208ENST00000533229 RAPGEF6Q8TEU7 1601 aa21.92■■□□□ 1.1
CACNA1E-208ENST00000533229 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
CACNA1E-208ENST00000533229 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
CACNA1E-208ENST00000533229 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
CACNA1E-208ENST00000533229 PLB1Q6P1J6 1458 aa21.89■■□□□ 1.09
CACNA1E-208ENST00000533229 GCC2Q8IWJ2 1684 aa21.88■■□□□ 1.09
CACNA1E-208ENST00000533229 JPH4Q96JJ6 628 aa21.88■■□□□ 1.09
CACNA1E-208ENST00000533229 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
CACNA1E-208ENST00000533229 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
CACNA1E-208ENST00000533229 NUP160Q12769 1436 aa21.87■■□□□ 1.09
CACNA1E-208ENST00000533229 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms