RNA–Protein interactions for RNA: ENST00000532671.1

MRPL49-207, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 2

Gene MRPL49, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-207ENST00000532671 ERICH6Q7L0X2 663 aa17.32■□□□□ 0.36
MRPL49-207ENST00000532671 ANP32CO43423 234 aa17.31■□□□□ 0.36
MRPL49-207ENST00000532671 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
MRPL49-207ENST00000532671 FANCIQ9NVI1 1328 aa17.28■□□□□ 0.36
MRPL49-207ENST00000532671 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
MRPL49-207ENST00000532671 PRXQ9BXM0 1461 aa17.27■□□□□ 0.35
MRPL49-207ENST00000532671 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
MRPL49-207ENST00000532671 SETD5Q9C0A6 1442 aa17.24■□□□□ 0.35
MRPL49-207ENST00000532671 ERICH3Q5RHP9 1530 aa17.23■□□□□ 0.35
MRPL49-207ENST00000532671 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
MRPL49-207ENST00000532671 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
MRPL49-207ENST00000532671 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
MRPL49-207ENST00000532671 HMGXB3Q12766 1538 aa17.21■□□□□ 0.35
MRPL49-207ENST00000532671 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
MRPL49-207ENST00000532671 DEKP35659 375 aaKnown RBP17.2■□□□□ 0.34
MRPL49-207ENST00000532671 PRKCSHP14314 528 aaPredicted RBP17.19■□□□□ 0.34
MRPL49-207ENST00000532671 PHLDB1Q86UU1 1377 aa17.14■□□□□ 0.33
MRPL49-207ENST00000532671 NBR1Q14596 966 aa17.11■□□□□ 0.33
MRPL49-207ENST00000532671 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
MRPL49-207ENST00000532671 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
MRPL49-207ENST00000532671 TIAM1Q13009 1591 aa17.07■□□□□ 0.32
MRPL49-207ENST00000532671 PAK3O75914 559 aaPredicted RBP17.06■□□□□ 0.32
MRPL49-207ENST00000532671 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
MRPL49-207ENST00000532671 CCDC184Q52MB2 194 aa17.05■□□□□ 0.32
MRPL49-207ENST00000532671 PPP4R2Q9NY27 417 aa17.05■□□□□ 0.32
MRPL49-207ENST00000532671 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
MRPL49-207ENST00000532671 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
MRPL49-207ENST00000532671 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
MRPL49-207ENST00000532671 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
MRPL49-207ENST00000532671 P3H3Q8IVL6 736 aa17.03■□□□□ 0.32
MRPL49-207ENST00000532671 CUX1P39880 1505 aa17.02■□□□□ 0.31
MRPL49-207ENST00000532671 ANO8Q9HCE9 1232 aaPredicted RBP17.01■□□□□ 0.31
MRPL49-207ENST00000532671 NESP48681 1621 aa17.01■□□□□ 0.31
MRPL49-207ENST00000532671 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
MRPL49-207ENST00000532671 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
MRPL49-207ENST00000532671 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
MRPL49-207ENST00000532671 WASHC2AQ641Q2 1341 aa16.94■□□□□ 0.3
MRPL49-207ENST00000532671 MAP3K1Q13233 1512 aa16.92■□□□□ 0.3
MRPL49-207ENST00000532671 HSPA5P11021 654 aaKnown RBP16.91■□□□□ 0.3
MRPL49-207ENST00000532671 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
MRPL49-207ENST00000532671 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
MRPL49-207ENST00000532671 PCF11O94913 1555 aaKnown RBP16.87■□□□□ 0.29
MRPL49-207ENST00000532671 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
MRPL49-207ENST00000532671 CCDC18Q5T9S5 1454 aa16.87■□□□□ 0.29
MRPL49-207ENST00000532671 IGF1RP08069 1367 aa16.87■□□□□ 0.29
MRPL49-207ENST00000532671 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
MRPL49-207ENST00000532671 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
MRPL49-207ENST00000532671 MRS2Q9HD23 443 aa16.85■□□□□ 0.29
MRPL49-207ENST00000532671 KDM5BQ9UGL1 1544 aa16.85■□□□□ 0.29
MRPL49-207ENST00000532671 IL27Q8NEV9 243 aa16.85■□□□□ 0.29
MRPL49-207ENST00000532671 RTN4Q9NQC3 1192 aaKnown RBP16.85■□□□□ 0.29
MRPL49-207ENST00000532671 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.29
MRPL49-207ENST00000532671 C11orf95C9JLR9 678 aaPredicted RBP16.84■□□□□ 0.29
MRPL49-207ENST00000532671 CFTRP13569 1480 aa16.84■□□□□ 0.29
MRPL49-207ENST00000532671 PTPRKQ15262 1439 aa16.84■□□□□ 0.29
MRPL49-207ENST00000532671 CFAP43Q8NDM7 1665 aa16.84■□□□□ 0.29
MRPL49-207ENST00000532671 CNGB1Q14028 1251 aaPredicted RBP16.83■□□□□ 0.28
MRPL49-207ENST00000532671 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
MRPL49-207ENST00000532671 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
MRPL49-207ENST00000532671 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
MRPL49-207ENST00000532671 CARMIL1Q5VZK9 1371 aa16.8■□□□□ 0.28
MRPL49-207ENST00000532671 AKNAQ7Z591 1439 aa16.8■□□□□ 0.28
MRPL49-207ENST00000532671 UACAQ9BZF9 1416 aa16.8■□□□□ 0.28
MRPL49-207ENST00000532671 ZBED9Q6R2W3 1325 aa16.8■□□□□ 0.28
MRPL49-207ENST00000532671 IPO9Q96P70 1041 aaKnown RBP16.79■□□□□ 0.28
MRPL49-207ENST00000532671 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
MRPL49-207ENST00000532671 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
MRPL49-207ENST00000532671 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.28
MRPL49-207ENST00000532671 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
MRPL49-207ENST00000532671 FGD6Q6ZV73 1430 aa16.76■□□□□ 0.27
MRPL49-207ENST00000532671 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
MRPL49-207ENST00000532671 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
MRPL49-207ENST00000532671 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
MRPL49-207ENST00000532671 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
MRPL49-207ENST00000532671 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
MRPL49-207ENST00000532671 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
MRPL49-207ENST00000532671 NAIPQ13075 1403 aa16.73■□□□□ 0.27
MRPL49-207ENST00000532671 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
MRPL49-207ENST00000532671 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
MRPL49-207ENST00000532671 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
MRPL49-207ENST00000532671 RRP7BPQ9NSQ0 103 aa16.72■□□□□ 0.27
MRPL49-207ENST00000532671 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
MRPL49-207ENST00000532671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.27
MRPL49-207ENST00000532671 CHIC2Q9UKJ5 165 aa16.71■□□□□ 0.27
MRPL49-207ENST00000532671 CCDC7Q96M83 1385 aa16.71■□□□□ 0.26
MRPL49-207ENST00000532671 FOXD1Q16676 465 aa16.7■□□□□ 0.26
MRPL49-207ENST00000532671 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
MRPL49-207ENST00000532671 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
MRPL49-207ENST00000532671 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
MRPL49-207ENST00000532671 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
MRPL49-207ENST00000532671 NCOA1Q15788 1441 aa16.66■□□□□ 0.26
MRPL49-207ENST00000532671 DENND4BO75064 1496 aaPredicted RBP16.66■□□□□ 0.26
MRPL49-207ENST00000532671 CASKIN1Q8WXD9 1431 aa16.65■□□□□ 0.26
MRPL49-207ENST00000532671 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
MRPL49-207ENST00000532671 MTUS2Q5JR59 1369 aa16.65■□□□□ 0.26
MRPL49-207ENST00000532671 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
MRPL49-207ENST00000532671 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.26
MRPL49-207ENST00000532671 NUDCQ9Y266 331 aa16.64■□□□□ 0.25
MRPL49-207ENST00000532671 FMN1Q68DA7 1419 aa16.64■□□□□ 0.25
MRPL49-207ENST00000532671 KIF7Q2M1P5 1343 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms