RNA–Protein interactions for RNA: ENST00000532066.1

TRIM44-202, Transcript of tripartite motif containing 44, humanhuman

TSL 4

Gene TRIM44, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-202ENST00000532066 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
TRIM44-202ENST00000532066 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
TRIM44-202ENST00000532066 CEP162Q5TB80 1403 aa12.4□□□□□ -0.42
TRIM44-202ENST00000532066 PDS5BQ9NTI5 1447 aa12.39□□□□□ -0.43
TRIM44-202ENST00000532066 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
TRIM44-202ENST00000532066 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
TRIM44-202ENST00000532066 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
TRIM44-202ENST00000532066 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
TRIM44-202ENST00000532066 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
TRIM44-202ENST00000532066 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
TRIM44-202ENST00000532066 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
TRIM44-202ENST00000532066 CUX2O14529 1486 aa12.31□□□□□ -0.44
TRIM44-202ENST00000532066 RAPGEF2Q9Y4G8 1499 aa12.31□□□□□ -0.44
TRIM44-202ENST00000532066 NESP48681 1621 aa12.3□□□□□ -0.44
TRIM44-202ENST00000532066 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
TRIM44-202ENST00000532066 CLIP1P30622 1438 aa12.29□□□□□ -0.44
TRIM44-202ENST00000532066 CHRDL2Q6WN34 429 aa12.28□□□□□ -0.44
TRIM44-202ENST00000532066 IGF1RP08069 1367 aa12.27□□□□□ -0.45
TRIM44-202ENST00000532066 ABCA10Q8WWZ4 1543 aa12.27□□□□□ -0.45
TRIM44-202ENST00000532066 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
TRIM44-202ENST00000532066 ZBTB22O15209 634 aa12.24□□□□□ -0.45
TRIM44-202ENST00000532066 HRCP23327 699 aa12.23□□□□□ -0.45
TRIM44-202ENST00000532066 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
TRIM44-202ENST00000532066 CARMIL1Q5VZK9 1371 aa12.22□□□□□ -0.45
TRIM44-202ENST00000532066 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
TRIM44-202ENST00000532066 VPS8Q8N3P4 1428 aa12.21□□□□□ -0.45
TRIM44-202ENST00000532066 MRC2Q9UBG0 1479 aa12.17□□□□□ -0.46
TRIM44-202ENST00000532066 RAD54L2Q9Y4B4 1467 aa12.17□□□□□ -0.46
TRIM44-202ENST00000532066 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
TRIM44-202ENST00000532066 CUL7Q14999 1698 aa12.16□□□□□ -0.46
TRIM44-202ENST00000532066 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
TRIM44-202ENST00000532066 ZEB1P37275 1124 aaPredicted RBP12.14□□□□□ -0.47
TRIM44-202ENST00000532066 OSCARQ8IYS5 282 aa12.12□□□□□ -0.47
TRIM44-202ENST00000532066 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
TRIM44-202ENST00000532066 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
TRIM44-202ENST00000532066 ABCA5Q8WWZ7 1642 aa12.1□□□□□ -0.47
TRIM44-202ENST00000532066 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
TRIM44-202ENST00000532066 ARAP1Q96P48 1450 aa12.08□□□□□ -0.47
TRIM44-202ENST00000532066 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
TRIM44-202ENST00000532066 IFT140Q96RY7 1462 aa12.08□□□□□ -0.48
TRIM44-202ENST00000532066 TARBP1Q13395 1621 aaKnown RBP12.08□□□□□ -0.48
TRIM44-202ENST00000532066 TDRD9Q8NDG6 1382 aaKnown RBP12.07□□□□□ -0.48
TRIM44-202ENST00000532066 WDR62O43379 1518 aa12.07□□□□□ -0.48
TRIM44-202ENST00000532066 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
TRIM44-202ENST00000532066 ARHGAP35Q9NRY4 1499 aa12.07□□□□□ -0.48
TRIM44-202ENST00000532066 ERCC6Q03468 1493 aa12.06□□□□□ -0.48
TRIM44-202ENST00000532066 EFCAB5A4FU69 1503 aa12.05□□□□□ -0.48
TRIM44-202ENST00000532066 FHAD1B1AJZ9 1412 aa12.04□□□□□ -0.48
TRIM44-202ENST00000532066 GRIN2BQ13224 1484 aa12.02□□□□□ -0.49
TRIM44-202ENST00000532066 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
TRIM44-202ENST00000532066 CTTNBP2Q8WZ74 1663 aa11.97□□□□□ -0.49
TRIM44-202ENST00000532066 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRIM44-202ENST00000532066 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
TRIM44-202ENST00000532066 TTBK1Q5TCY1 1321 aaPredicted RBP11.96□□□□□ -0.49
TRIM44-202ENST00000532066 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
TRIM44-202ENST00000532066 PBRM1Q86U86 1689 aa11.94□□□□□ -0.5
TRIM44-202ENST00000532066 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
TRIM44-202ENST00000532066 FBLN2P98095 1184 aa11.94□□□□□ -0.5
TRIM44-202ENST00000532066 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
TRIM44-202ENST00000532066 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
TRIM44-202ENST00000532066 FYCO1Q9BQS8 1478 aa11.93□□□□□ -0.5
TRIM44-202ENST00000532066 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
TRIM44-202ENST00000532066 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
TRIM44-202ENST00000532066 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
TRIM44-202ENST00000532066 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
TRIM44-202ENST00000532066 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
TRIM44-202ENST00000532066 MAGI1Q96QZ7 1491 aaPredicted RBP11.9□□□□□ -0.5
TRIM44-202ENST00000532066 TIAM1Q13009 1591 aa11.9□□□□□ -0.5
TRIM44-202ENST00000532066 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
TRIM44-202ENST00000532066 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
TRIM44-202ENST00000532066 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRIM44-202ENST00000532066 KANK4Q5T7N3 995 aaPredicted RBP11.89□□□□□ -0.51
TRIM44-202ENST00000532066 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
TRIM44-202ENST00000532066 FHOD3Q2V2M9 1422 aa11.88□□□□□ -0.51
TRIM44-202ENST00000532066 RRBP1Q9P2E9 1410 aaKnown RBP11.87□□□□□ -0.51
TRIM44-202ENST00000532066 P3H3Q8IVL6 736 aa11.87□□□□□ -0.51
TRIM44-202ENST00000532066 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
TRIM44-202ENST00000532066 LRRC9Q6ZRR7 1453 aa11.87□□□□□ -0.51
TRIM44-202ENST00000532066 IQGAP2Q13576 1575 aa11.87□□□□□ -0.51
TRIM44-202ENST00000532066 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
TRIM44-202ENST00000532066 SNAPC4Q5SXM2 1469 aa11.86□□□□□ -0.51
TRIM44-202ENST00000532066 EIF4G3O43432 1585 aaKnown RBP11.86□□□□□ -0.51
TRIM44-202ENST00000532066 PCF11O94913 1555 aaKnown RBP11.85□□□□□ -0.51
TRIM44-202ENST00000532066 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
TRIM44-202ENST00000532066 GRIN2AQ12879 1464 aa11.84□□□□□ -0.51
TRIM44-202ENST00000532066 UGGT2Q9NYU1 1516 aa11.84□□□□□ -0.51
TRIM44-202ENST00000532066 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
TRIM44-202ENST00000532066 CCNB3Q8WWL7 1395 aa11.83□□□□□ -0.52
TRIM44-202ENST00000532066 CHMP7Q8WUX9 453 aaPredicted RBP11.83□□□□□ -0.52
TRIM44-202ENST00000532066 ATP1B4Q9UN42 357 aaPredicted RBP11.83□□□□□ -0.52
TRIM44-202ENST00000532066 MKRN4PQ13434 485 aaPredicted RBP11.82□□□□□ -0.52
TRIM44-202ENST00000532066 CCDC18Q5T9S5 1454 aa11.81□□□□□ -0.52
TRIM44-202ENST00000532066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRIM44-202ENST00000532066 CLSPNQ9HAW4 1339 aa11.78□□□□□ -0.52
TRIM44-202ENST00000532066 MTUS2Q5JR59 1369 aa11.78□□□□□ -0.52
TRIM44-202ENST00000532066 HAX1O00165 279 aa11.76□□□□□ -0.53
TRIM44-202ENST00000532066 NUP160Q12769 1436 aa11.76□□□□□ -0.53
TRIM44-202ENST00000532066 CARMIL2Q6F5E8 1435 aa11.76□□□□□ -0.53
TRIM44-202ENST00000532066 HECW1Q76N89 1606 aa11.75□□□□□ -0.53
TRIM44-202ENST00000532066 EHBP1L1Q8N3D4 1523 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms