RNA–Protein interactions for RNA: ENST00000532048.5

CELF1-215, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 1 (best) BASIC

Gene CELF1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-215ENST00000532048 LRRC9Q6ZRR7 1453 aa12.34□□□□□ -0.43
CELF1-215ENST00000532048 FHAD1B1AJZ9 1412 aa12.34□□□□□ -0.43
CELF1-215ENST00000532048 RAB3GAP2Q9H2M9 1393 aa12.34□□□□□ -0.43
CELF1-215ENST00000532048 NESP48681 1621 aa12.34□□□□□ -0.43
CELF1-215ENST00000532048 MAP3K1Q13233 1512 aa12.33□□□□□ -0.44
CELF1-215ENST00000532048 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
CELF1-215ENST00000532048 PHLDB1Q86UU1 1377 aa12.32□□□□□ -0.44
CELF1-215ENST00000532048 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
CELF1-215ENST00000532048 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CELF1-215ENST00000532048 FHOD3Q2V2M9 1422 aa12.31□□□□□ -0.44
CELF1-215ENST00000532048 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
CELF1-215ENST00000532048 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
CELF1-215ENST00000532048 PCF11O94913 1555 aaKnown RBP12.29□□□□□ -0.44
CELF1-215ENST00000532048 MAPKBP1O60336 1514 aa12.24□□□□□ -0.45
CELF1-215ENST00000532048 CFAP43Q8NDM7 1665 aa12.24□□□□□ -0.45
CELF1-215ENST00000532048 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
CELF1-215ENST00000532048 SIN3AQ96ST3 1273 aa12.24□□□□□ -0.45
CELF1-215ENST00000532048 EFCAB5A4FU69 1503 aa12.23□□□□□ -0.45
CELF1-215ENST00000532048 FYCO1Q9BQS8 1478 aa12.23□□□□□ -0.45
CELF1-215ENST00000532048 CUL7Q14999 1698 aa12.23□□□□□ -0.45
CELF1-215ENST00000532048 CASKIN1Q8WXD9 1431 aa12.23□□□□□ -0.45
CELF1-215ENST00000532048 URB2Q14146 1524 aaKnown RBP12.22□□□□□ -0.45
CELF1-215ENST00000532048 FMN1Q68DA7 1419 aa12.2□□□□□ -0.46
CELF1-215ENST00000532048 CTTNBP2Q8WZ74 1663 aa12.19□□□□□ -0.46
CELF1-215ENST00000532048 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
CELF1-215ENST00000532048 AQRO60306 1485 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■■■■□ 26.1
CELF1-215ENST00000532048 MTUS2Q5JR59 1369 aa12.19□□□□□ -0.46
CELF1-215ENST00000532048 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
CELF1-215ENST00000532048 GAPVD1Q14C86 1478 aa12.17□□□□□ -0.46
CELF1-215ENST00000532048 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
CELF1-215ENST00000532048 FGD6Q6ZV73 1430 aa12.15□□□□□ -0.46
CELF1-215ENST00000532048 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
CELF1-215ENST00000532048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.14□□□□□ -0.47
CELF1-215ENST00000532048 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
CELF1-215ENST00000532048 DDX10Q13206 875 aaKnown RBP12.13□□□□□ -0.47
CELF1-215ENST00000532048 ABCA5Q8WWZ7 1642 aa12.13□□□□□ -0.47
CELF1-215ENST00000532048 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
CELF1-215ENST00000532048 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
CELF1-215ENST00000532048 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
CELF1-215ENST00000532048 PPP1R15AO75807 674 aaPredicted RBP12.1□□□□□ -0.47
CELF1-215ENST00000532048 SAMD9Q5K651 1589 aa12.1□□□□□ -0.47
CELF1-215ENST00000532048 NCOA2Q15596 1464 aa12.09□□□□□ -0.47
CELF1-215ENST00000532048 CCDC18Q5T9S5 1454 aa12.09□□□□□ -0.47
CELF1-215ENST00000532048 PTPRKQ15262 1439 aa12.08□□□□□ -0.48
CELF1-215ENST00000532048 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
CELF1-215ENST00000532048 TONSLQ96HA7 1378 aa12.08□□□□□ -0.48
CELF1-215ENST00000532048 KIF21AQ7Z4S6 1674 aa12.07□□□□□ -0.48
CELF1-215ENST00000532048 MYOM3Q5VTT5 1437 aa12.07□□□□□ -0.48
CELF1-215ENST00000532048 HFM1A2PYH4 1435 aa12.06□□□□□ -0.48
CELF1-215ENST00000532048 SUPT16HQ9Y5B9 1047 aaKnown RBP12.05□□□□□ -0.48
CELF1-215ENST00000532048 LRRIQ1Q96JM4 1722 aa12.05□□□□□ -0.48
CELF1-215ENST00000532048 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
CELF1-215ENST00000532048 CHIC2Q9UKJ5 165 aa12.05□□□□□ -0.48
CELF1-215ENST00000532048 UACAQ9BZF9 1416 aa12.04□□□□□ -0.48
CELF1-215ENST00000532048 SUPT6HQ7KZ85 1726 aaKnown RBP12.04□□□□□ -0.48
CELF1-215ENST00000532048 RRP7BPQ9NSQ0 103 aa12.04□□□□□ -0.48
CELF1-215ENST00000532048 TARBP1Q13395 1621 aaKnown RBP12.03□□□□□ -0.48
CELF1-215ENST00000532048 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
CELF1-215ENST00000532048 PTPN23Q9H3S7 1636 aa12.03□□□□□ -0.48
CELF1-215ENST00000532048 NAIPQ13075 1403 aa12.03□□□□□ -0.48
CELF1-215ENST00000532048 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
CELF1-215ENST00000532048 TRIM52Q96A61 297 aa12□□□□□ -0.49
CELF1-215ENST00000532048 MAGI3Q5TCQ9 1506 aa12□□□□□ -0.49
CELF1-215ENST00000532048 ANP32CO43423 234 aa12□□□□□ -0.49
CELF1-215ENST00000532048 UGGT2Q9NYU1 1516 aa12□□□□□ -0.49
CELF1-215ENST00000532048 IQGAP2Q13576 1575 aa11.98□□□□□ -0.49
CELF1-215ENST00000532048 PBRM1Q86U86 1689 aa11.98□□□□□ -0.49
CELF1-215ENST00000532048 HECW1Q76N89 1606 aa11.97□□□□□ -0.49
CELF1-215ENST00000532048 EPRSP07814 1512 aaKnown RBP11.97□□□□□ -0.49
CELF1-215ENST00000532048 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
CELF1-215ENST00000532048 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.5
CELF1-215ENST00000532048 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
CELF1-215ENST00000532048 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
CELF1-215ENST00000532048 CCER2I3L3R5 266 aa11.94□□□□□ -0.5
CELF1-215ENST00000532048 TCOF1Q13428 1488 aaKnown RBP11.93□□□□□ -0.5
CELF1-215ENST00000532048 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
CELF1-215ENST00000532048 BCANQ96GW7 911 aa11.91□□□□□ -0.5
CELF1-215ENST00000532048 MPHOSPH9Q99550 1183 aa11.91□□□□□ -0.5
CELF1-215ENST00000532048 FOXD1Q16676 465 aa11.91□□□□□ -0.5
CELF1-215ENST00000532048 MIA2Q96PC5 1412 aa11.91□□□□□ -0.5
CELF1-215ENST00000532048 WDR62O43379 1518 aa11.9□□□□□ -0.5
CELF1-215ENST00000532048 FKBP8Q14318 412 aa11.9□□□□□ -0.5
CELF1-215ENST00000532048 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
CELF1-215ENST00000532048 KDM6BO15054 1643 aa11.89□□□□□ -0.51
CELF1-215ENST00000532048 HSPA5P11021 654 aaKnown RBP11.88□□□□□ -0.51
CELF1-215ENST00000532048 GCC2Q8IWJ2 1684 aa11.87□□□□□ -0.51
CELF1-215ENST00000532048 KDM5BQ9UGL1 1544 aa11.87□□□□□ -0.51
CELF1-215ENST00000532048 AKNAQ7Z591 1439 aa11.87□□□□□ -0.51
CELF1-215ENST00000532048 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
CELF1-215ENST00000532048 DENND4BO75064 1496 aaPredicted RBP11.87□□□□□ -0.51
CELF1-215ENST00000532048 CDK11AQ9UQ88 783 aaPredicted RBP11.87□□□□□ -0.51
CELF1-215ENST00000532048 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
CELF1-215ENST00000532048 L3MBTL2Q969R5 705 aa11.86□□□□□ -0.51
CELF1-215ENST00000532048 NEFLP07196 543 aa11.86□□□□□ -0.51
CELF1-215ENST00000532048 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
CELF1-215ENST00000532048 FBLN2P98095 1184 aa11.85□□□□□ -0.51
CELF1-215ENST00000532048 DISP1Q96F81 1524 aa11.85□□□□□ -0.51
CELF1-215ENST00000532048 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
CELF1-215ENST00000532048 DAPK1P53355 1430 aa11.84□□□□□ -0.51
CELF1-215ENST00000532048 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms