RNA–Protein interactions for RNA: ENST00000531883.5

RNPC3-206, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 2

Gene RNPC3, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-206ENST00000531883 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.32
RNPC3-206ENST00000531883 ADAMTS12P58397 1594 aa17.02■□□□□ 0.31
RNPC3-206ENST00000531883 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
RNPC3-206ENST00000531883 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
RNPC3-206ENST00000531883 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
RNPC3-206ENST00000531883 FHAD1B1AJZ9 1412 aa16.97■□□□□ 0.31
RNPC3-206ENST00000531883 GOLGA3Q08378 1498 aa16.97■□□□□ 0.31
RNPC3-206ENST00000531883 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
RNPC3-206ENST00000531883 LOC105371045A0A1W2PR82 267 aa16.94■□□□□ 0.3
RNPC3-206ENST00000531883 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
RNPC3-206ENST00000531883 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
RNPC3-206ENST00000531883 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
RNPC3-206ENST00000531883 CHD1O14646 1710 aa16.87■□□□□ 0.29
RNPC3-206ENST00000531883 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
RNPC3-206ENST00000531883 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
RNPC3-206ENST00000531883 FBLN2P98095 1184 aa16.85■□□□□ 0.29
RNPC3-206ENST00000531883 CTTNBP2Q8WZ74 1663 aa16.83■□□□□ 0.28
RNPC3-206ENST00000531883 TNIKQ9UKE5 1360 aa16.82■□□□□ 0.28
RNPC3-206ENST00000531883 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
RNPC3-206ENST00000531883 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
RNPC3-206ENST00000531883 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
RNPC3-206ENST00000531883 NUP160Q12769 1436 aa16.78■□□□□ 0.28
RNPC3-206ENST00000531883 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
RNPC3-206ENST00000531883 KIAA0586Q9BVV6 1533 aa16.73■□□□□ 0.27
RNPC3-206ENST00000531883 CEP162Q5TB80 1403 aa16.71■□□□□ 0.27
RNPC3-206ENST00000531883 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
RNPC3-206ENST00000531883 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
RNPC3-206ENST00000531883 CLIP1P30622 1438 aa16.67■□□□□ 0.26
RNPC3-206ENST00000531883 UGGT2Q9NYU1 1516 aa16.64■□□□□ 0.25
RNPC3-206ENST00000531883 ARHGAP35Q9NRY4 1499 aa16.62■□□□□ 0.25
RNPC3-206ENST00000531883 EFCAB5A4FU69 1503 aa16.62■□□□□ 0.25
RNPC3-206ENST00000531883 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
RNPC3-206ENST00000531883 SAMD9Q5K651 1589 aa16.62■□□□□ 0.25
RNPC3-206ENST00000531883 SHROOM2Q13796 1616 aa16.61■□□□□ 0.25
RNPC3-206ENST00000531883 JPH4Q96JJ6 628 aa16.58■□□□□ 0.24
RNPC3-206ENST00000531883 DISP1Q96F81 1524 aa16.58■□□□□ 0.24
RNPC3-206ENST00000531883 KIAA0556O60303 1618 aa16.58■□□□□ 0.24
RNPC3-206ENST00000531883 ARAP1Q96P48 1450 aa16.56■□□□□ 0.24
RNPC3-206ENST00000531883 FHOD3Q2V2M9 1422 aa16.54■□□□□ 0.24
RNPC3-206ENST00000531883 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
RNPC3-206ENST00000531883 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
RNPC3-206ENST00000531883 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
RNPC3-206ENST00000531883 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
RNPC3-206ENST00000531883 C1QBPQ07021 282 aaKnown RBP16.49■□□□□ 0.23
RNPC3-206ENST00000531883 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
RNPC3-206ENST00000531883 FMN1Q68DA7 1419 aa16.45■□□□□ 0.22
RNPC3-206ENST00000531883 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
RNPC3-206ENST00000531883 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
RNPC3-206ENST00000531883 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
RNPC3-206ENST00000531883 PTPRGP23470 1445 aa16.39■□□□□ 0.21
RNPC3-206ENST00000531883 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
RNPC3-206ENST00000531883 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
RNPC3-206ENST00000531883 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
RNPC3-206ENST00000531883 RIMBP3CA6NJZ7 1639 aa16.36■□□□□ 0.21
RNPC3-206ENST00000531883 RIMBP3BA6NNM3 1639 aa16.36■□□□□ 0.21
RNPC3-206ENST00000531883 RIMBP3Q9UFD9 1639 aa16.36■□□□□ 0.21
RNPC3-206ENST00000531883 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
RNPC3-206ENST00000531883 ABCA8O94911 1581 aa16.35■□□□□ 0.21
RNPC3-206ENST00000531883 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
RNPC3-206ENST00000531883 HECW1Q76N89 1606 aa16.34■□□□□ 0.21
RNPC3-206ENST00000531883 LRRIQ1Q96JM4 1722 aa16.32■□□□□ 0.2
RNPC3-206ENST00000531883 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
RNPC3-206ENST00000531883 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
RNPC3-206ENST00000531883 NUP153P49790 1475 aaKnown RBP16.29■□□□□ 0.2
RNPC3-206ENST00000531883 CFAP43Q8NDM7 1665 aa16.29■□□□□ 0.2
RNPC3-206ENST00000531883 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
RNPC3-206ENST00000531883 TIAM1Q13009 1591 aa16.27■□□□□ 0.2
RNPC3-206ENST00000531883 EPRSP07814 1512 aaKnown RBP16.26■□□□□ 0.19
RNPC3-206ENST00000531883 UHRF1BP1LA0JNW5 1464 aa16.26■□□□□ 0.19
RNPC3-206ENST00000531883 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
RNPC3-206ENST00000531883 ADCY10Q96PN6 1610 aa16.26■□□□□ 0.19
RNPC3-206ENST00000531883 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
RNPC3-206ENST00000531883 CDK13Q14004 1512 aaKnown RBP16.25■□□□□ 0.19
RNPC3-206ENST00000531883 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
RNPC3-206ENST00000531883 APLP2Q06481 763 aa16.25■□□□□ 0.19
RNPC3-206ENST00000531883 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
RNPC3-206ENST00000531883 ATP10BO94823 1461 aa16.21■□□□□ 0.19
RNPC3-206ENST00000531883 ZCCHC11Q5TAX3 1644 aaKnown RBP16.19■□□□□ 0.18
RNPC3-206ENST00000531883 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
RNPC3-206ENST00000531883 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
RNPC3-206ENST00000531883 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
RNPC3-206ENST00000531883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
RNPC3-206ENST00000531883 LRRC9Q6ZRR7 1453 aa16.17■□□□□ 0.18
RNPC3-206ENST00000531883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.17■□□□□ 0.18
RNPC3-206ENST00000531883 HNRNPUL2Q1KMD3 747 aaKnown RBP16.17■□□□□ 0.18
RNPC3-206ENST00000531883 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
RNPC3-206ENST00000531883 MAGI3Q5TCQ9 1506 aa16.17■□□□□ 0.18
RNPC3-206ENST00000531883 EHBP1L1Q8N3D4 1523 aa16.15■□□□□ 0.18
RNPC3-206ENST00000531883 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
RNPC3-206ENST00000531883 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
RNPC3-206ENST00000531883 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
RNPC3-206ENST00000531883 TROQ12816 1431 aaPredicted RBP16.1■□□□□ 0.17
RNPC3-206ENST00000531883 SUPT6HQ7KZ85 1726 aaKnown RBP16.09■□□□□ 0.17
RNPC3-206ENST00000531883 PLEKHD1A6NEE1 506 aa16.08■□□□□ 0.16
RNPC3-206ENST00000531883 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
RNPC3-206ENST00000531883 KIF14Q15058 1648 aa16.06■□□□□ 0.16
RNPC3-206ENST00000531883 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
RNPC3-206ENST00000531883 ASXL2Q76L83 1435 aa16.05■□□□□ 0.16
RNPC3-206ENST00000531883 WDR7Q9Y4E6 1490 aa16.04■□□□□ 0.16
RNPC3-206ENST00000531883 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms