RNA–Protein interactions for RNA: ENST00000531429.1

SCUBE2-211, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-211ENST00000531429 BBXQ8WY36 941 aaPredicted RBP13.14□□□□□ -0.31
SCUBE2-211ENST00000531429 CADPSQ9ULU8 1353 aa13.12□□□□□ -0.31
SCUBE2-211ENST00000531429 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCUBE2-211ENST00000531429 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
SCUBE2-211ENST00000531429 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
SCUBE2-211ENST00000531429 PRKCSHP14314 528 aaPredicted RBP13.09□□□□□ -0.31
SCUBE2-211ENST00000531429 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
SCUBE2-211ENST00000531429 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
SCUBE2-211ENST00000531429 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
SCUBE2-211ENST00000531429 PAXIP1Q6ZW49 1069 aaPredicted RBP13.06□□□□□ -0.32
SCUBE2-211ENST00000531429 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
SCUBE2-211ENST00000531429 PLCD3Q8N3E9 789 aa13.05□□□□□ -0.32
SCUBE2-211ENST00000531429 SSUH2Q9Y2M2 353 aa13.05□□□□□ -0.32
SCUBE2-211ENST00000531429 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
SCUBE2-211ENST00000531429 RGL2O15211 777 aa13.04□□□□□ -0.32
SCUBE2-211ENST00000531429 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
SCUBE2-211ENST00000531429 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
SCUBE2-211ENST00000531429 SPDYE2BA6NHP3 402 aa13.02□□□□□ -0.33
SCUBE2-211ENST00000531429 SPDYE6P0CI01 402 aa13.02□□□□□ -0.33
SCUBE2-211ENST00000531429 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
SCUBE2-211ENST00000531429 CFAP44Q96MT7 982 aa13.02□□□□□ -0.33
SCUBE2-211ENST00000531429 WDR62O43379 1518 aa13.01□□□□□ -0.33
SCUBE2-211ENST00000531429 TOP2AP11388 1531 aaKnown RBP13□□□□□ -0.33
SCUBE2-211ENST00000531429 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
SCUBE2-211ENST00000531429 DSG3P32926 999 aa12.97□□□□□ -0.33
SCUBE2-211ENST00000531429 CFTRP13569 1480 aa12.97□□□□□ -0.33
SCUBE2-211ENST00000531429 MIER1Q8N108 512 aa12.96□□□□□ -0.33
SCUBE2-211ENST00000531429 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
SCUBE2-211ENST00000531429 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
SCUBE2-211ENST00000531429 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
SCUBE2-211ENST00000531429 TRIM41Q8WV44 630 aa12.88□□□□□ -0.35
SCUBE2-211ENST00000531429 TSHZ2Q9NRE2 1034 aa12.88□□□□□ -0.35
SCUBE2-211ENST00000531429 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
SCUBE2-211ENST00000531429 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
SCUBE2-211ENST00000531429 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
SCUBE2-211ENST00000531429 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
SCUBE2-211ENST00000531429 PRDM2Q13029 1718 aa12.81□□□□□ -0.36
SCUBE2-211ENST00000531429 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
SCUBE2-211ENST00000531429 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
SCUBE2-211ENST00000531429 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
SCUBE2-211ENST00000531429 IFT140Q96RY7 1462 aa12.74□□□□□ -0.37
SCUBE2-211ENST00000531429 HS6ST3Q8IZP7 471 aa12.74□□□□□ -0.37
SCUBE2-211ENST00000531429 DNMBPQ6XZF7 1577 aa12.69□□□□□ -0.38
SCUBE2-211ENST00000531429 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
SCUBE2-211ENST00000531429 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
SCUBE2-211ENST00000531429 EIF4G3O43432 1585 aaKnown RBP12.67□□□□□ -0.38
SCUBE2-211ENST00000531429 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
SCUBE2-211ENST00000531429 GSE1Q14687 1217 aa12.63□□□□□ -0.39
SCUBE2-211ENST00000531429 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCUBE2-211ENST00000531429 POLA1P09884 1462 aaPredicted RBP12.62□□□□□ -0.39
SCUBE2-211ENST00000531429 NBR1Q14596 966 aa12.61□□□□□ -0.39
SCUBE2-211ENST00000531429 RIMBP3CA6NJZ7 1639 aa12.61□□□□□ -0.39
SCUBE2-211ENST00000531429 RIMBP3BA6NNM3 1639 aa12.61□□□□□ -0.39
SCUBE2-211ENST00000531429 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
SCUBE2-211ENST00000531429 RIMBP3Q9UFD9 1639 aa12.61□□□□□ -0.39
SCUBE2-211ENST00000531429 NUBP1P53384 320 aa12.6□□□□□ -0.39
SCUBE2-211ENST00000531429 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
SCUBE2-211ENST00000531429 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
SCUBE2-211ENST00000531429 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
SCUBE2-211ENST00000531429 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
SCUBE2-211ENST00000531429 SOGA1O94964 1423 aa12.56□□□□□ -0.4
SCUBE2-211ENST00000531429 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
SCUBE2-211ENST00000531429 CHD1O14646 1710 aa12.56□□□□□ -0.4
SCUBE2-211ENST00000531429 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
SCUBE2-211ENST00000531429 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
SCUBE2-211ENST00000531429 CUX1P39880 1505 aa12.52□□□□□ -0.4
SCUBE2-211ENST00000531429 SNAPC4Q5SXM2 1469 aa12.52□□□□□ -0.41
SCUBE2-211ENST00000531429 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
SCUBE2-211ENST00000531429 CYB5RLQ6IPT4 315 aa12.51□□□□□ -0.41
SCUBE2-211ENST00000531429 GTPBP6O43824 516 aaPredicted RBP12.5□□□□□ -0.41
SCUBE2-211ENST00000531429 CHMP7Q8WUX9 453 aaPredicted RBP12.47□□□□□ -0.41
SCUBE2-211ENST00000531429 ARAP1Q96P48 1450 aa12.46□□□□□ -0.41
SCUBE2-211ENST00000531429 STK25O00506 426 aa12.46□□□□□ -0.41
SCUBE2-211ENST00000531429 GRIN2BQ13224 1484 aa12.46□□□□□ -0.42
SCUBE2-211ENST00000531429 WDR97A6NE52 1622 aa12.45□□□□□ -0.42
SCUBE2-211ENST00000531429 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
SCUBE2-211ENST00000531429 FAM212AQ96EL1 285 aa12.45□□□□□ -0.42
SCUBE2-211ENST00000531429 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
SCUBE2-211ENST00000531429 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
SCUBE2-211ENST00000531429 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
SCUBE2-211ENST00000531429 SYNJ1O43426 1573 aa12.42□□□□□ -0.42
SCUBE2-211ENST00000531429 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
SCUBE2-211ENST00000531429 MNX1P50219 401 aaPredicted RBP12.41□□□□□ -0.42
SCUBE2-211ENST00000531429 SYNJ2O15056 1496 aa12.4□□□□□ -0.42
SCUBE2-211ENST00000531429 PBRM1Q86U86 1689 aa12.4□□□□□ -0.42
SCUBE2-211ENST00000531429 CLASP1Q7Z460 1538 aa12.4□□□□□ -0.42
SCUBE2-211ENST00000531429 ABCA10Q8WWZ4 1543 aa12.38□□□□□ -0.43
SCUBE2-211ENST00000531429 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
SCUBE2-211ENST00000531429 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
SCUBE2-211ENST00000531429 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
SCUBE2-211ENST00000531429 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
SCUBE2-211ENST00000531429 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
SCUBE2-211ENST00000531429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.35□□□□□ -0.43
SCUBE2-211ENST00000531429 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
SCUBE2-211ENST00000531429 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
SCUBE2-211ENST00000531429 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
SCUBE2-211ENST00000531429 WRNQ14191 1432 aaPredicted RBP eCLIP12.35□□□□□ -0.43
SCUBE2-211ENST00000531429 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
SCUBE2-211ENST00000531429 STK24Q9Y6E0 443 aa12.34□□□□□ -0.43
SCUBE2-211ENST00000531429 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms