RNA–Protein interactions for RNA: ENST00000531309.1

DKK3-210, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-210ENST00000531309 PEG3Q9GZU2 1588 aa10.99□□□□□ -0.65
DKK3-210ENST00000531309 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
DKK3-210ENST00000531309 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
DKK3-210ENST00000531309 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
DKK3-210ENST00000531309 CHD1O14646 1710 aa10.93□□□□□ -0.66
DKK3-210ENST00000531309 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
DKK3-210ENST00000531309 SPDYE6P0CI01 402 aa10.93□□□□□ -0.66
DKK3-210ENST00000531309 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
DKK3-210ENST00000531309 ILDR1Q86SU0 546 aaPredicted RBP10.93□□□□□ -0.66
DKK3-210ENST00000531309 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
DKK3-210ENST00000531309 FANCD2Q9BXW9 1451 aa10.9□□□□□ -0.66
DKK3-210ENST00000531309 STAG3Q9UJ98 1225 aa10.89□□□□□ -0.67
DKK3-210ENST00000531309 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
DKK3-210ENST00000531309 URB2Q14146 1524 aaKnown RBP10.83□□□□□ -0.68
DKK3-210ENST00000531309 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
DKK3-210ENST00000531309 KLHL34Q8N239 644 aa10.82□□□□□ -0.68
DKK3-210ENST00000531309 RSF1Q96T23 1441 aaPredicted RBP10.81□□□□□ -0.68
DKK3-210ENST00000531309 PKD2Q13563 968 aa10.8□□□□□ -0.68
DKK3-210ENST00000531309 SPOCK2Q92563 424 aa10.8□□□□□ -0.68
DKK3-210ENST00000531309 EIF4G3O43432 1585 aaKnown RBP10.8□□□□□ -0.68
DKK3-210ENST00000531309 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
DKK3-210ENST00000531309 MROH2BQ7Z745 1585 aa10.78□□□□□ -0.68
DKK3-210ENST00000531309 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
DKK3-210ENST00000531309 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
DKK3-210ENST00000531309 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
DKK3-210ENST00000531309 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
DKK3-210ENST00000531309 WIZO95785 1651 aa10.73□□□□□ -0.69
DKK3-210ENST00000531309 MIER1Q8N108 512 aa10.72□□□□□ -0.69
DKK3-210ENST00000531309 CFTRP13569 1480 aa10.72□□□□□ -0.69
DKK3-210ENST00000531309 KIF13AQ9H1H9 1805 aa10.66□□□□□ -0.7
DKK3-210ENST00000531309 ECM2O94769 699 aaPredicted RBP10.66□□□□□ -0.7
DKK3-210ENST00000531309 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
DKK3-210ENST00000531309 SYNJ1O43426 1573 aa10.65□□□□□ -0.7
DKK3-210ENST00000531309 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
DKK3-210ENST00000531309 CLASP1Q7Z460 1538 aa10.63□□□□□ -0.71
DKK3-210ENST00000531309 AQRO60306 1485 aaKnown RBP eCLIP10.62□□□□□ -0.71
DKK3-210ENST00000531309 TOPBP1Q92547 1522 aa10.62□□□□□ -0.71
DKK3-210ENST00000531309 TARBP1Q13395 1621 aaKnown RBP10.59□□□□□ -0.71
DKK3-210ENST00000531309 GAPVD1Q14C86 1478 aa10.59□□□□□ -0.71
DKK3-210ENST00000531309 ABCC8Q09428 1581 aa10.59□□□□□ -0.71
DKK3-210ENST00000531309 HAP1P54257 671 aaPredicted RBP10.58□□□□□ -0.72
DKK3-210ENST00000531309 DNMBPQ6XZF7 1577 aa10.56□□□□□ -0.72
DKK3-210ENST00000531309 ERCC6L2Q5T890 1561 aa10.56□□□□□ -0.72
DKK3-210ENST00000531309 BBXQ8WY36 941 aaPredicted RBP10.55□□□□□ -0.72
DKK3-210ENST00000531309 KDM4FA0A1W2PPD8 638 aa10.54□□□□□ -0.72
DKK3-210ENST00000531309 CHMP7Q8WUX9 453 aaPredicted RBP10.54□□□□□ -0.72
DKK3-210ENST00000531309 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.54□□□□□ -0.72
DKK3-210ENST00000531309 RBM42Q9BTD8 480 aaKnown RBP10.53□□□□□ -0.72
DKK3-210ENST00000531309 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
DKK3-210ENST00000531309 SNAPC4Q5SXM2 1469 aa10.53□□□□□ -0.72
DKK3-210ENST00000531309 RGL2O15211 777 aa10.52□□□□□ -0.73
DKK3-210ENST00000531309 KDM6BO15054 1643 aa10.51□□□□□ -0.73
DKK3-210ENST00000531309 TSPOAP1O95153 1857 aa10.51□□□□□ -0.73
DKK3-210ENST00000531309 TOP2AP11388 1531 aaKnown RBP10.49□□□□□ -0.73
DKK3-210ENST00000531309 SUPT5HO00267 1087 aaKnown RBP10.49□□□□□ -0.73
DKK3-210ENST00000531309 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
DKK3-210ENST00000531309 AKT1S1Q96B36 256 aa10.49□□□□□ -0.73
DKK3-210ENST00000531309 HECW2Q9P2P5 1572 aa10.48□□□□□ -0.73
DKK3-210ENST00000531309 WDR97A6NE52 1622 aa10.48□□□□□ -0.73
DKK3-210ENST00000531309 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
DKK3-210ENST00000531309 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
DKK3-210ENST00000531309 PBRM1Q86U86 1689 aa10.47□□□□□ -0.73
DKK3-210ENST00000531309 VSIG10Q8N0Z9 540 aa10.46□□□□□ -0.73
DKK3-210ENST00000531309 POLA1P09884 1462 aaPredicted RBP10.46□□□□□ -0.74
DKK3-210ENST00000531309 FBXO41Q8TF61 875 aa10.45□□□□□ -0.74
DKK3-210ENST00000531309 SYNJ2O15056 1496 aa10.44□□□□□ -0.74
DKK3-210ENST00000531309 TDRD9Q8NDG6 1382 aaKnown RBP10.44□□□□□ -0.74
DKK3-210ENST00000531309 GSE1Q14687 1217 aa10.44□□□□□ -0.74
DKK3-210ENST00000531309 PAXIP1Q6ZW49 1069 aaPredicted RBP10.43□□□□□ -0.74
DKK3-210ENST00000531309 LMTK3Q96Q04 1460 aa10.42□□□□□ -0.74
DKK3-210ENST00000531309 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
DKK3-210ENST00000531309 SOGA1O94964 1423 aa10.41□□□□□ -0.74
DKK3-210ENST00000531309 PRR29P0C7W0 189 aa10.4□□□□□ -0.74
DKK3-210ENST00000531309 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
DKK3-210ENST00000531309 CLEC11AQ9Y240 323 aa10.4□□□□□ -0.74
DKK3-210ENST00000531309 GRIN2BQ13224 1484 aa10.4□□□□□ -0.74
DKK3-210ENST00000531309 NUBP1P53384 320 aa10.39□□□□□ -0.75
DKK3-210ENST00000531309 FAM69CQ0P6D2 419 aa10.39□□□□□ -0.75
DKK3-210ENST00000531309 ADGRL1O94910 1474 aa10.38□□□□□ -0.75
DKK3-210ENST00000531309 CHGAP10645 457 aaKnown RBP10.38□□□□□ -0.75
DKK3-210ENST00000531309 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
DKK3-210ENST00000531309 CEP170Q5SW79 1584 aa10.37□□□□□ -0.75
DKK3-210ENST00000531309 REM2Q8IYK8 340 aaPredicted RBP10.37□□□□□ -0.75
DKK3-210ENST00000531309 DIP2BQ9P265 1576 aa10.37□□□□□ -0.75
DKK3-210ENST00000531309 ABCC10Q5T3U5 1492 aa10.36□□□□□ -0.75
DKK3-210ENST00000531309 DCAF8Q5TAQ9 597 aa10.35□□□□□ -0.75
DKK3-210ENST00000531309 CREBZFQ9NS37 354 aa10.35□□□□□ -0.75
DKK3-210ENST00000531309 BCANQ96GW7 911 aa10.33□□□□□ -0.76
DKK3-210ENST00000531309 CCDC88BA6NC98 1476 aa10.33□□□□□ -0.76
DKK3-210ENST00000531309 FGD5Q6ZNL6 1462 aa10.32□□□□□ -0.76
DKK3-210ENST00000531309 TAOK2Q9UL54 1235 aa10.32□□□□□ -0.76
DKK3-210ENST00000531309 SHROOM2Q13796 1616 aa10.32□□□□□ -0.76
DKK3-210ENST00000531309 HS6ST3Q8IZP7 471 aa10.31□□□□□ -0.76
DKK3-210ENST00000531309 FAM212AQ96EL1 285 aa10.31□□□□□ -0.76
DKK3-210ENST00000531309 MAPKBP1O60336 1514 aa10.3□□□□□ -0.76
DKK3-210ENST00000531309 SOCS7O14512 581 aa10.3□□□□□ -0.76
DKK3-210ENST00000531309 MNX1P50219 401 aaPredicted RBP10.3□□□□□ -0.76
DKK3-210ENST00000531309 RNF25Q96BH1 459 aaPredicted RBP10.28□□□□□ -0.76
DKK3-210ENST00000531309 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
DKK3-210ENST00000531309 GRIN2AQ12879 1464 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms