RNA–Protein interactions for RNA: ENST00000529947.1

UBTF-210, Transcript of upstream binding transcription factor, humanhuman

TSL 3

Gene UBTF, Length 685 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-210ENST00000529947 TOPBP1Q92547 1522 aa13.22□□□□□ -0.29
UBTF-210ENST00000529947 CARMIL1Q5VZK9 1371 aa13.21□□□□□ -0.29
UBTF-210ENST00000529947 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
UBTF-210ENST00000529947 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
UBTF-210ENST00000529947 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
UBTF-210ENST00000529947 RNF216Q9NWF9 866 aaPredicted RBP13.18□□□□□ -0.3
UBTF-210ENST00000529947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
UBTF-210ENST00000529947 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
UBTF-210ENST00000529947 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
UBTF-210ENST00000529947 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
UBTF-210ENST00000529947 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
UBTF-210ENST00000529947 KCNA4P22459 653 aa13.11□□□□□ -0.31
UBTF-210ENST00000529947 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
UBTF-210ENST00000529947 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
UBTF-210ENST00000529947 EIF4G3O43432 1585 aaKnown RBP13.09□□□□□ -0.31
UBTF-210ENST00000529947 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
UBTF-210ENST00000529947 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.32
UBTF-210ENST00000529947 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
UBTF-210ENST00000529947 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
UBTF-210ENST00000529947 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.33
UBTF-210ENST00000529947 FHAD1B1AJZ9 1412 aa13.02□□□□□ -0.33
UBTF-210ENST00000529947 AQRO60306 1485 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■□□ 16.4
UBTF-210ENST00000529947 WDR97A6NE52 1622 aa13.01□□□□□ -0.33
UBTF-210ENST00000529947 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
UBTF-210ENST00000529947 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
UBTF-210ENST00000529947 CHD1O14646 1710 aa12.98□□□□□ -0.33
UBTF-210ENST00000529947 GAPVD1Q14C86 1478 aa12.97□□□□□ -0.33
UBTF-210ENST00000529947 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
UBTF-210ENST00000529947 CUL7Q14999 1698 aa12.96□□□□□ -0.33
UBTF-210ENST00000529947 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
UBTF-210ENST00000529947 ATP1B4Q9UN42 357 aaPredicted RBP12.95□□□□□ -0.34
UBTF-210ENST00000529947 CLSPNQ9HAW4 1339 aa12.93□□□□□ -0.34
UBTF-210ENST00000529947 RRBP1Q9P2E9 1410 aaKnown RBP12.93□□□□□ -0.34
UBTF-210ENST00000529947 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
UBTF-210ENST00000529947 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
UBTF-210ENST00000529947 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
UBTF-210ENST00000529947 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
UBTF-210ENST00000529947 FMN1Q68DA7 1419 aa12.9□□□□□ -0.34
UBTF-210ENST00000529947 SNAPC4Q5SXM2 1469 aa12.89□□□□□ -0.35
UBTF-210ENST00000529947 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
UBTF-210ENST00000529947 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
UBTF-210ENST00000529947 GRIN2BQ13224 1484 aa12.88□□□□□ -0.35
UBTF-210ENST00000529947 RIMBP3CA6NJZ7 1639 aa12.88□□□□□ -0.35
UBTF-210ENST00000529947 RIMBP3BA6NNM3 1639 aa12.88□□□□□ -0.35
UBTF-210ENST00000529947 RIMBP3Q9UFD9 1639 aa12.88□□□□□ -0.35
UBTF-210ENST00000529947 LRRC9Q6ZRR7 1453 aa12.87□□□□□ -0.35
UBTF-210ENST00000529947 MAGI1Q96QZ7 1491 aaPredicted RBP12.87□□□□□ -0.35
UBTF-210ENST00000529947 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
UBTF-210ENST00000529947 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
UBTF-210ENST00000529947 FHOD3Q2V2M9 1422 aa12.85□□□□□ -0.35
UBTF-210ENST00000529947 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
UBTF-210ENST00000529947 ARHGEF11O15085 1522 aa12.83□□□□□ -0.35
UBTF-210ENST00000529947 ITGAEP38570 1179 aa12.82□□□□□ -0.36
UBTF-210ENST00000529947 SYNJ2O15056 1496 aa12.82□□□□□ -0.36
UBTF-210ENST00000529947 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
UBTF-210ENST00000529947 FBLN2P98095 1184 aa12.81□□□□□ -0.36
UBTF-210ENST00000529947 FAM50AQ14320 339 aaKnown RBP12.81□□□□□ -0.36
UBTF-210ENST00000529947 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
UBTF-210ENST00000529947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
UBTF-210ENST00000529947 ADAMTS12P58397 1594 aa12.78□□□□□ -0.36
UBTF-210ENST00000529947 DHX57Q6P158 1386 aaKnown RBP12.78□□□□□ -0.36
UBTF-210ENST00000529947 CTTNBP2Q8WZ74 1663 aa12.77□□□□□ -0.36
UBTF-210ENST00000529947 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.37
UBTF-210ENST00000529947 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
UBTF-210ENST00000529947 PHLDB1Q86UU1 1377 aa12.76□□□□□ -0.37
UBTF-210ENST00000529947 SETD5Q9C0A6 1442 aa12.76□□□□□ -0.37
UBTF-210ENST00000529947 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
UBTF-210ENST00000529947 SAMD9Q5K651 1589 aa12.73□□□□□ -0.37
UBTF-210ENST00000529947 GRIN2AQ12879 1464 aa12.73□□□□□ -0.37
UBTF-210ENST00000529947 CFAP43Q8NDM7 1665 aa12.71□□□□□ -0.37
UBTF-210ENST00000529947 RAB3GAP2Q9H2M9 1393 aa12.7□□□□□ -0.38
UBTF-210ENST00000529947 CEP170Q5SW79 1584 aa12.7□□□□□ -0.38
UBTF-210ENST00000529947 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
UBTF-210ENST00000529947 KIAA0586Q9BVV6 1533 aa12.7□□□□□ -0.38
UBTF-210ENST00000529947 CDK11AQ9UQ88 783 aaPredicted RBP12.69□□□□□ -0.38
UBTF-210ENST00000529947 CCDC18Q5T9S5 1454 aa12.69□□□□□ -0.38
UBTF-210ENST00000529947 NUP160Q12769 1436 aa12.69□□□□□ -0.38
UBTF-210ENST00000529947 IQGAP2Q13576 1575 aa12.69□□□□□ -0.38
UBTF-210ENST00000529947 ACIN1Q9UKV3 1341 aaKnown RBP12.66□□□□□ -0.38
UBTF-210ENST00000529947 FGD6Q6ZV73 1430 aa12.66□□□□□ -0.38
UBTF-210ENST00000529947 UGGT2Q9NYU1 1516 aa12.66□□□□□ -0.38
UBTF-210ENST00000529947 CYB5RLQ6IPT4 315 aa12.65□□□□□ -0.38
UBTF-210ENST00000529947 SHROOM2Q13796 1616 aa12.65□□□□□ -0.38
UBTF-210ENST00000529947 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
UBTF-210ENST00000529947 MYOM3Q5VTT5 1437 aa12.63□□□□□ -0.39
UBTF-210ENST00000529947 NCOA2Q15596 1464 aa12.63□□□□□ -0.39
UBTF-210ENST00000529947 EHBP1L1Q8N3D4 1523 aa12.62□□□□□ -0.39
UBTF-210ENST00000529947 CENPBP07199 599 aaPredicted RBP12.62□□□□□ -0.39
UBTF-210ENST00000529947 HECW1Q76N89 1606 aa12.61□□□□□ -0.39
UBTF-210ENST00000529947 CARMIL2Q6F5E8 1435 aa12.61□□□□□ -0.39
UBTF-210ENST00000529947 JPH4Q96JJ6 628 aa12.6□□□□□ -0.39
UBTF-210ENST00000529947 EPRSP07814 1512 aaKnown RBP12.6□□□□□ -0.39
UBTF-210ENST00000529947 MIA2Q96PC5 1412 aa12.58□□□□□ -0.4
UBTF-210ENST00000529947 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
UBTF-210ENST00000529947 NEUROD1Q13562 356 aa12.56□□□□□ -0.4
UBTF-210ENST00000529947 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
UBTF-210ENST00000529947 DISP1Q96F81 1524 aa12.55□□□□□ -0.4
UBTF-210ENST00000529947 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
UBTF-210ENST00000529947 TCOF1Q13428 1488 aaKnown RBP12.53□□□□□ -0.4
UBTF-210ENST00000529947 ARID3CA6NKF2 412 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms