RNA–Protein interactions for RNA: ENST00000529551.1

CPQ-208, Transcript of carboxypeptidase Q, human

TSL 2

Gene CPQ, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPQ-208	ENST00000529551	CADPS	Q9ULU8	1353 aa		14.2	□□□□□ -0.14
CPQ-208	ENST00000529551	PITPNM1	O00562	1244 aa		14.19	□□□□□ -0.14
CPQ-208	ENST00000529551	MRC2	Q9UBG0	1479 aa		14.17	□□□□□ -0.14
CPQ-208	ENST00000529551	FXR2	P51116	673 aa	Known RBP eCLIP	14.14	□□□□□ -0.15
CPQ-208	ENST00000529551	VASP	P50552	380 aa	Predicted RBP	14.13	□□□□□ -0.15
CPQ-208	ENST00000529551	PROM2	Q8N271	834 aa		14.13	□□□□□ -0.15
CPQ-208	ENST00000529551	WDR62	O43379	1518 aa		14.12	□□□□□ -0.15
CPQ-208	ENST00000529551	WIZ	O95785	1651 aa		14.09	□□□□□ -0.15
CPQ-208	ENST00000529551	MKRN4P	Q13434	485 aa	Predicted RBP	14.08	□□□□□ -0.16
CPQ-208	ENST00000529551	EVX2	Q03828	476 aa		14.07	□□□□□ -0.16
CPQ-208	ENST00000529551	CEP164	Q9UPV0	1460 aa		14.06	□□□□□ -0.16
CPQ-208	ENST00000529551	FANCD2	Q9BXW9	1451 aa		14.04	□□□□□ -0.16
CPQ-208	ENST00000529551	HAP1	P54257	671 aa	Predicted RBP	14.01	□□□□□ -0.17
CPQ-208	ENST00000529551	FBLN2	P98095	1184 aa		14.01	□□□□□ -0.17
CPQ-208	ENST00000529551	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.97	□□□□□ -0.17
CPQ-208	ENST00000529551	URB2	Q14146	1524 aa	Known RBP	13.95	□□□□□ -0.18
CPQ-208	ENST00000529551	CFTR	P13569	1480 aa		13.95	□□□□□ -0.18
CPQ-208	ENST00000529551	PLSCR2	Q9NRY7	297 aa		13.94	□□□□□ -0.18
CPQ-208	ENST00000529551	PKD2	Q13563	968 aa		13.88	□□□□□ -0.19
CPQ-208	ENST00000529551	RIMBP3C	A6NJZ7	1639 aa		13.88	□□□□□ -0.19
CPQ-208	ENST00000529551	RIMBP3B	A6NNM3	1639 aa		13.88	□□□□□ -0.19
CPQ-208	ENST00000529551	RIMBP3	Q9UFD9	1639 aa		13.88	□□□□□ -0.19
CPQ-208	ENST00000529551	RSF1	Q96T23	1441 aa	Predicted RBP	13.88	□□□□□ -0.19
CPQ-208	ENST00000529551	BCAN	Q96GW7	911 aa		13.87	□□□□□ -0.19
CPQ-208	ENST00000529551	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.86	□□□□□ -0.19
CPQ-208	ENST00000529551	TOP2A	P11388	1531 aa	Known RBP	13.84	□□□□□ -0.19
CPQ-208	ENST00000529551	PRKAR2A	P13861	404 aa	Known RBP	13.82	□□□□□ -0.2
CPQ-208	ENST00000529551	VSIG10	Q8N0Z9	540 aa		13.81	□□□□□ -0.2
CPQ-208	ENST00000529551	ARHGEF11	O15085	1522 aa		13.8	□□□□□ -0.2
CPQ-208	ENST00000529551	CYB5RL	Q6IPT4	315 aa		13.8	□□□□□ -0.2
CPQ-208	ENST00000529551	SPDYE2B	A6NHP3	402 aa		13.79	□□□□□ -0.2
CPQ-208	ENST00000529551	SPDYE6	P0CI01	402 aa		13.79	□□□□□ -0.2
CPQ-208	ENST00000529551	SPDYE2	Q495Y8	402 aa		13.79	□□□□□ -0.2
CPQ-208	ENST00000529551	IFT140	Q96RY7	1462 aa		13.77	□□□□□ -0.21
CPQ-208	ENST00000529551	CLEC11A	Q9Y240	323 aa		13.77	□□□□□ -0.21
CPQ-208	ENST00000529551	TOPBP1	Q92547	1522 aa		13.74	□□□□□ -0.21
CPQ-208	ENST00000529551	CCDC88B	A6NC98	1476 aa		13.74	□□□□□ -0.21
CPQ-208	ENST00000529551	PRDM2	Q13029	1718 aa		13.71	□□□□□ -0.21
CPQ-208	ENST00000529551	C19orf67	A6NJJ6	358 aa		13.71	□□□□□ -0.21
CPQ-208	ENST00000529551	AQR	O60306	1485 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
CPQ-208	ENST00000529551	EIF4G3	O43432	1585 aa	Known RBP	13.7	□□□□□ -0.22
CPQ-208	ENST00000529551	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.69	□□□□□ -0.22
CPQ-208	ENST00000529551	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.69	□□□□□ -0.22
CPQ-208	ENST00000529551	TAOK2	Q9UL54	1235 aa		13.69	□□□□□ -0.22
CPQ-208	ENST00000529551	GABBR2	O75899	941 aa		13.68	□□□□□ -0.22
CPQ-208	ENST00000529551	SPOCK2	Q92563	424 aa		13.68	□□□□□ -0.22
CPQ-208	ENST00000529551	ARAP1	Q96P48	1450 aa		13.67	□□□□□ -0.22
CPQ-208	ENST00000529551	PRKCSH	P14314	528 aa	Predicted RBP	13.67	□□□□□ -0.22
CPQ-208	ENST00000529551	BBX	Q8WY36	941 aa	Predicted RBP	13.67	□□□□□ -0.22
CPQ-208	ENST00000529551	CHD1	O14646	1710 aa		13.65	□□□□□ -0.22
CPQ-208	ENST00000529551	KLHL34	Q8N239	644 aa		13.65	□□□□□ -0.22
CPQ-208	ENST00000529551	ECM2	O94769	699 aa	Predicted RBP	13.63	□□□□□ -0.23
CPQ-208	ENST00000529551	LHX8	Q68G74	356 aa		13.63	□□□□□ -0.23
CPQ-208	ENST00000529551	DNMBP	Q6XZF7	1577 aa		13.62	□□□□□ -0.23
CPQ-208	ENST00000529551	TARBP1	Q13395	1621 aa	Known RBP	13.62	□□□□□ -0.23
CPQ-208	ENST00000529551	ABCC8	Q09428	1581 aa		13.61	□□□□□ -0.23
CPQ-208	ENST00000529551	CHADL	Q6NUI6	762 aa		13.6	□□□□□ -0.23
CPQ-208	ENST00000529551	RAD54L2	Q9Y4B4	1467 aa		13.6	□□□□□ -0.23
CPQ-208	ENST00000529551	TDRD9	Q8NDG6	1382 aa	Known RBP	13.58	□□□□□ -0.23
CPQ-208	ENST00000529551	ZNF692	Q9BU19	519 aa	Predicted RBP	13.58	□□□□□ -0.24
CPQ-208	ENST00000529551	POLA1	P09884	1462 aa	Predicted RBP	13.58	□□□□□ -0.24
CPQ-208	ENST00000529551	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.57	□□□□□ -0.24
CPQ-208	ENST00000529551	KDM2A	Q9Y2K7	1162 aa		13.56	□□□□□ -0.24
CPQ-208	ENST00000529551	SSUH2	Q9Y2M2	353 aa		13.56	□□□□□ -0.24
CPQ-208	ENST00000529551	NPM1	P06748	294 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CPQ-208	ENST00000529551	STAG3	Q9UJ98	1225 aa		13.54	□□□□□ -0.24
CPQ-208	ENST00000529551	SOGA1	O94964	1423 aa		13.54	□□□□□ -0.24
CPQ-208	ENST00000529551	CFAP44	Q96MT7	982 aa		13.53	□□□□□ -0.24
CPQ-208	ENST00000529551	SNAPC4	Q5SXM2	1469 aa		13.52	□□□□□ -0.25
CPQ-208	ENST00000529551	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.5	□□□□□ -0.25
CPQ-208	ENST00000529551	CLASP1	Q7Z460	1538 aa		13.49	□□□□□ -0.25
CPQ-208	ENST00000529551	TPRN	Q4KMQ1	711 aa		13.48	□□□□□ -0.25
CPQ-208	ENST00000529551	PLCD3	Q8N3E9	789 aa		13.48	□□□□□ -0.25
CPQ-208	ENST00000529551	RGL2	O15211	777 aa		13.47	□□□□□ -0.25
CPQ-208	ENST00000529551	FGD5	Q6ZNL6	1462 aa		13.47	□□□□□ -0.25
CPQ-208	ENST00000529551	PRR29	P0C7W0	189 aa		13.43	□□□□□ -0.26
CPQ-208	ENST00000529551	SPRYD3	Q8NCJ5	442 aa		13.43	□□□□□ -0.26
CPQ-208	ENST00000529551	SYNJ1	O43426	1573 aa		13.42	□□□□□ -0.26
CPQ-208	ENST00000529551	CUX1	P39880	1505 aa		13.42	□□□□□ -0.26
CPQ-208	ENST00000529551	GRIN2B	Q13224	1484 aa		13.41	□□□□□ -0.26
CPQ-208	ENST00000529551	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.41	□□□□□ -0.26
CPQ-208	ENST00000529551	POTEI	P0CG38	1075 aa		13.4	□□□□□ -0.26
CPQ-208	ENST00000529551	SYNJ2	O15056	1496 aa		13.39	□□□□□ -0.27
CPQ-208	ENST00000529551	GAPVD1	Q14C86	1478 aa		13.38	□□□□□ -0.27
CPQ-208	ENST00000529551	TSHZ2	Q9NRE2	1034 aa		13.37	□□□□□ -0.27
CPQ-208	ENST00000529551	WDR97	A6NE52	1622 aa		13.35	□□□□□ -0.27
CPQ-208	ENST00000529551	MIER1	Q8N108	512 aa		13.35	□□□□□ -0.27
CPQ-208	ENST00000529551	ERCC6L2	Q5T890	1561 aa		13.34	□□□□□ -0.27
CPQ-208	ENST00000529551	CD44	P16070	742 aa	Known RBP	13.34	□□□□□ -0.27
CPQ-208	ENST00000529551	PBRM1	Q86U86	1689 aa		13.31	□□□□□ -0.28
CPQ-208	ENST00000529551	CHGA	P10645	457 aa	Known RBP	13.31	□□□□□ -0.28
CPQ-208	ENST00000529551	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.3	□□□□□ -0.28
CPQ-208	ENST00000529551	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.27	□□□□□ -0.29
CPQ-208	ENST00000529551	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.27	□□□□□ -0.29
CPQ-208	ENST00000529551	ABCA10	Q8WWZ4	1543 aa		13.26	□□□□□ -0.29
CPQ-208	ENST00000529551	ABCA5	Q8WWZ7	1642 aa		13.26	□□□□□ -0.29
CPQ-208	ENST00000529551	GRIN2A	Q12879	1464 aa		13.24	□□□□□ -0.29
CPQ-208	ENST00000529551	PLEKHG5	O94827	1062 aa		13.24	□□□□□ -0.29
CPQ-208	ENST00000529551	CEP170	Q5SW79	1584 aa		13.23	□□□□□ -0.29
CPQ-208	ENST00000529551	NUP160	Q12769	1436 aa		13.21	□□□□□ -0.3

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