RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 CUX1P39880 1505 aa25.23■■□□□ 1.63
PDZD3-210ENST00000529098 CADPSQ9ULU8 1353 aa25.23■■□□□ 1.63
PDZD3-210ENST00000529098 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
PDZD3-210ENST00000529098 DNAJC5BQ9UF47 199 aa25.21■■□□□ 1.63
PDZD3-210ENST00000529098 MAPKBP1O60336 1514 aa25.17■■□□□ 1.62
PDZD3-210ENST00000529098 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
PDZD3-210ENST00000529098 ANP32CO43423 234 aa25.16■■□□□ 1.62
PDZD3-210ENST00000529098 KANK4Q5T7N3 995 aaPredicted RBP25.14■■□□□ 1.62
PDZD3-210ENST00000529098 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
PDZD3-210ENST00000529098 ERICH6BQ5W0A0 696 aa25.1■■□□□ 1.61
PDZD3-210ENST00000529098 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
PDZD3-210ENST00000529098 RANGAP1P46060 587 aaPredicted RBP25.09■■□□□ 1.61
PDZD3-210ENST00000529098 NESP48681 1621 aa25.09■■□□□ 1.61
PDZD3-210ENST00000529098 ARAP1Q96P48 1450 aa25.08■■□□□ 1.61
PDZD3-210ENST00000529098 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
PDZD3-210ENST00000529098 TIMELESSQ9UNS1 1208 aa25.03■■□□□ 1.6
PDZD3-210ENST00000529098 ANO8Q9HCE9 1232 aaPredicted RBP25.01■■□□□ 1.59
PDZD3-210ENST00000529098 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
PDZD3-210ENST00000529098 PPP4R2Q9NY27 417 aa24.97■■□□□ 1.59
PDZD3-210ENST00000529098 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
PDZD3-210ENST00000529098 NOP58Q9Y2X3 529 aaKnown RBP24.95■■□□□ 1.58
PDZD3-210ENST00000529098 IRX6P78412 446 aaPredicted RBP24.93■■□□□ 1.58
PDZD3-210ENST00000529098 SETD5Q9C0A6 1442 aa24.92■■□□□ 1.58
PDZD3-210ENST00000529098 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
PDZD3-210ENST00000529098 SIN3AQ96ST3 1273 aa24.89■■□□□ 1.57
PDZD3-210ENST00000529098 KIF27Q86VH2 1401 aa24.89■■□□□ 1.57
PDZD3-210ENST00000529098 HNRNPUQ00839 825 aaKnown RBP eCLIP24.88■■□□□ 1.57
PDZD3-210ENST00000529098 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
PDZD3-210ENST00000529098 NBR1Q14596 966 aa24.84■■□□□ 1.57
PDZD3-210ENST00000529098 HIRIP3Q9BW71 556 aaPredicted RBP24.83■■□□□ 1.57
PDZD3-210ENST00000529098 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
PDZD3-210ENST00000529098 SALL2Q9Y467 1007 aaPredicted RBP24.8■■□□□ 1.56
PDZD3-210ENST00000529098 PAK3O75914 559 aaPredicted RBP24.78■■□□□ 1.56
PDZD3-210ENST00000529098 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
PDZD3-210ENST00000529098 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
PDZD3-210ENST00000529098 RAD54L2Q9Y4B4 1467 aa24.74■■□□□ 1.55
PDZD3-210ENST00000529098 RTL5Q5HYW3 569 aaPredicted RBP24.73■■□□□ 1.55
PDZD3-210ENST00000529098 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.54
PDZD3-210ENST00000529098 IGF1RP08069 1367 aa24.7■■□□□ 1.54
PDZD3-210ENST00000529098 B4GALNT3Q6L9W6 998 aa24.7■■□□□ 1.54
PDZD3-210ENST00000529098 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
PDZD3-210ENST00000529098 MAP3K1Q13233 1512 aa24.68■■□□□ 1.54
PDZD3-210ENST00000529098 ARHGAP35Q9NRY4 1499 aa24.66■■□□□ 1.54
PDZD3-210ENST00000529098 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
PDZD3-210ENST00000529098 IPO9Q96P70 1041 aaKnown RBP24.66■■□□□ 1.54
PDZD3-210ENST00000529098 PDS5BQ9NTI5 1447 aa24.65■■□□□ 1.54
PDZD3-210ENST00000529098 ANP32AP39687 249 aaKnown RBP24.63■■□□□ 1.53
PDZD3-210ENST00000529098 TIAM1Q13009 1591 aa24.61■■□□□ 1.53
PDZD3-210ENST00000529098 IL27Q8NEV9 243 aa24.6■■□□□ 1.53
PDZD3-210ENST00000529098 TONSLQ96HA7 1378 aa24.59■■□□□ 1.53
PDZD3-210ENST00000529098 ZBTB47Q9UFB7 747 aaPredicted RBP24.58■■□□□ 1.53
PDZD3-210ENST00000529098 CARMIL1Q5VZK9 1371 aa24.58■■□□□ 1.52
PDZD3-210ENST00000529098 ABCA10Q8WWZ4 1543 aa24.57■■□□□ 1.52
PDZD3-210ENST00000529098 UBE2Q2Q8WVN8 375 aa24.57■■□□□ 1.52
PDZD3-210ENST00000529098 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
PDZD3-210ENST00000529098 PHLDB1Q86UU1 1377 aa24.54■■□□□ 1.52
PDZD3-210ENST00000529098 CCDC136Q96JN2 1154 aa24.54■■□□□ 1.52
PDZD3-210ENST00000529098 WASHC2AQ641Q2 1341 aa24.53■■□□□ 1.52
PDZD3-210ENST00000529098 LRRC9Q6ZRR7 1453 aa24.53■■□□□ 1.52
PDZD3-210ENST00000529098 ZBED9Q6R2W3 1325 aa24.52■■□□□ 1.52
PDZD3-210ENST00000529098 FAM50AQ14320 339 aaKnown RBP24.52■■□□□ 1.52
PDZD3-210ENST00000529098 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
PDZD3-210ENST00000529098 RTN4Q9NQC3 1192 aaKnown RBP24.45■■□□□ 1.5
PDZD3-210ENST00000529098 USP35Q9P2H5 1018 aa24.44■■□□□ 1.5
PDZD3-210ENST00000529098 C11orf95C9JLR9 678 aaPredicted RBP24.42■■□□□ 1.5
PDZD3-210ENST00000529098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
PDZD3-210ENST00000529098 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
PDZD3-210ENST00000529098 CCDC184Q52MB2 194 aa24.39■■□□□ 1.5
PDZD3-210ENST00000529098 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.39■■□□□ 1.49
PDZD3-210ENST00000529098 CNTLNQ9NXG0 1405 aa24.39■■□□□ 1.49
PDZD3-210ENST00000529098 WASHC2CQ9Y4E1 1318 aa24.37■■□□□ 1.49
PDZD3-210ENST00000529098 FAM9BQ8IZU0 186 aa24.36■■□□□ 1.49
PDZD3-210ENST00000529098 KDM5BQ9UGL1 1544 aa24.35■■□□□ 1.49
PDZD3-210ENST00000529098 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
PDZD3-210ENST00000529098 SMG6Q86US8 1419 aaKnown RBP24.34■■□□□ 1.49
PDZD3-210ENST00000529098 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.49
PDZD3-210ENST00000529098 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
PDZD3-210ENST00000529098 PRKRIP1Q9H875 184 aaPredicted RBP24.33■■□□□ 1.49
PDZD3-210ENST00000529098 UACAQ9BZF9 1416 aa24.33■■□□□ 1.49
PDZD3-210ENST00000529098 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.48
PDZD3-210ENST00000529098 HSPA5P11021 654 aaKnown RBP24.32■■□□□ 1.48
PDZD3-210ENST00000529098 MRS2Q9HD23 443 aa24.32■■□□□ 1.48
PDZD3-210ENST00000529098 RNF123Q5XPI4 1314 aa24.32■■□□□ 1.48
PDZD3-210ENST00000529098 CFAP43Q8NDM7 1665 aa24.32■■□□□ 1.48
PDZD3-210ENST00000529098 CUL7Q14999 1698 aa24.3■■□□□ 1.48
PDZD3-210ENST00000529098 CCDC18Q5T9S5 1454 aa24.3■■□□□ 1.48
PDZD3-210ENST00000529098 NEFMP07197 916 aa24.29■■□□□ 1.48
PDZD3-210ENST00000529098 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
PDZD3-210ENST00000529098 AKNAQ7Z591 1439 aa24.24■■□□□ 1.47
PDZD3-210ENST00000529098 PPM1GO15355 546 aaPredicted RBP24.24■■□□□ 1.47
PDZD3-210ENST00000529098 EIF4G2P78344 907 aaKnown RBP eCLIP24.24■■□□□ 1.47
PDZD3-210ENST00000529098 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.47
PDZD3-210ENST00000529098 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
PDZD3-210ENST00000529098 NUDCQ9Y266 331 aa24.22■■□□□ 1.47
PDZD3-210ENST00000529098 ERCC6Q03468 1493 aa24.2■■□□□ 1.46
PDZD3-210ENST00000529098 LAS1LQ9Y4W2 734 aaKnown RBP24.19■■□□□ 1.46
PDZD3-210ENST00000529098 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
PDZD3-210ENST00000529098 CCDC7Q96M83 1385 aa24.17■■□□□ 1.46
PDZD3-210ENST00000529098 WDR62O43379 1518 aa24.17■■□□□ 1.46
PDZD3-210ENST00000529098 PTPN23Q9H3S7 1636 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms