RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
SCN3B-203ENST00000527125 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-203ENST00000527125 LRRIQ1Q96JM4 1722 aa13.45□□□□□ -0.26
SCN3B-203ENST00000527125 SETD5Q9C0A6 1442 aa13.45□□□□□ -0.26
SCN3B-203ENST00000527125 ANP32EQ9BTT0 268 aa13.44□□□□□ -0.26
SCN3B-203ENST00000527125 KCNH8Q96L42 1107 aa13.43□□□□□ -0.26
SCN3B-203ENST00000527125 IGF1RP08069 1367 aa13.43□□□□□ -0.26
SCN3B-203ENST00000527125 PHLDB1Q86UU1 1377 aa13.42□□□□□ -0.26
SCN3B-203ENST00000527125 AQRO60306 1485 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCN3B-203ENST00000527125 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
SCN3B-203ENST00000527125 CTTNBP2Q8WZ74 1663 aa13.4□□□□□ -0.26
SCN3B-203ENST00000527125 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
SCN3B-203ENST00000527125 FYCO1Q9BQS8 1478 aa13.36□□□□□ -0.27
SCN3B-203ENST00000527125 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
SCN3B-203ENST00000527125 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
SCN3B-203ENST00000527125 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
SCN3B-203ENST00000527125 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.28
SCN3B-203ENST00000527125 SAMD9Q5K651 1589 aa13.32□□□□□ -0.28
SCN3B-203ENST00000527125 POLR1AO95602 1720 aaPredicted RBP13.32□□□□□ -0.28
SCN3B-203ENST00000527125 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
SCN3B-203ENST00000527125 CUL7Q14999 1698 aa13.32□□□□□ -0.28
SCN3B-203ENST00000527125 FHAD1B1AJZ9 1412 aa13.31□□□□□ -0.28
SCN3B-203ENST00000527125 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
SCN3B-203ENST00000527125 CASKIN1Q8WXD9 1431 aa13.3□□□□□ -0.28
SCN3B-203ENST00000527125 GCC2Q8IWJ2 1684 aa13.3□□□□□ -0.28
SCN3B-203ENST00000527125 KIF21AQ7Z4S6 1674 aa13.28□□□□□ -0.28
SCN3B-203ENST00000527125 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.28
SCN3B-203ENST00000527125 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.28
SCN3B-203ENST00000527125 HECW1Q76N89 1606 aa13.27□□□□□ -0.28
SCN3B-203ENST00000527125 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
SCN3B-203ENST00000527125 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
SCN3B-203ENST00000527125 HFM1A2PYH4 1435 aa13.26□□□□□ -0.29
SCN3B-203ENST00000527125 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
SCN3B-203ENST00000527125 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
SCN3B-203ENST00000527125 ABCA5Q8WWZ7 1642 aa13.24□□□□□ -0.29
SCN3B-203ENST00000527125 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
SCN3B-203ENST00000527125 UACAQ9BZF9 1416 aa13.23□□□□□ -0.29
SCN3B-203ENST00000527125 SIN3AQ96ST3 1273 aa13.23□□□□□ -0.29
SCN3B-203ENST00000527125 RANGAP1P46060 587 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-203ENST00000527125 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
SCN3B-203ENST00000527125 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
SCN3B-203ENST00000527125 CCDC18Q5T9S5 1454 aa13.21□□□□□ -0.3
SCN3B-203ENST00000527125 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
SCN3B-203ENST00000527125 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
SCN3B-203ENST00000527125 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
SCN3B-203ENST00000527125 FKBP8Q14318 412 aa13.2□□□□□ -0.3
SCN3B-203ENST00000527125 MSH5O43196 834 aa13.19□□□□□ -0.3
SCN3B-203ENST00000527125 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
SCN3B-203ENST00000527125 TCOF1Q13428 1488 aaKnown RBP13.19□□□□□ -0.3
SCN3B-203ENST00000527125 NAIPQ13075 1403 aa13.19□□□□□ -0.3
SCN3B-203ENST00000527125 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
SCN3B-203ENST00000527125 SUPT6HQ7KZ85 1726 aaKnown RBP13.18□□□□□ -0.3
SCN3B-203ENST00000527125 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
SCN3B-203ENST00000527125 FANCIQ9NVI1 1328 aa13.16□□□□□ -0.3
SCN3B-203ENST00000527125 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
SCN3B-203ENST00000527125 FHOD3Q2V2M9 1422 aa13.15□□□□□ -0.3
SCN3B-203ENST00000527125 MAGI3Q5TCQ9 1506 aa13.15□□□□□ -0.3
SCN3B-203ENST00000527125 KDM6BO15054 1643 aa13.14□□□□□ -0.31
SCN3B-203ENST00000527125 EHBP1L1Q8N3D4 1523 aa13.14□□□□□ -0.31
SCN3B-203ENST00000527125 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
SCN3B-203ENST00000527125 TOPBP1Q92547 1522 aa13.12□□□□□ -0.31
SCN3B-203ENST00000527125 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
SCN3B-203ENST00000527125 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
SCN3B-203ENST00000527125 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
SCN3B-203ENST00000527125 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.31
SCN3B-203ENST00000527125 ITGAEP38570 1179 aa13.08□□□□□ -0.32
SCN3B-203ENST00000527125 BCANQ96GW7 911 aa13.08□□□□□ -0.32
SCN3B-203ENST00000527125 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
SCN3B-203ENST00000527125 RAD54L2Q9Y4B4 1467 aa13.07□□□□□ -0.32
SCN3B-203ENST00000527125 ANP32CO43423 234 aa13.06□□□□□ -0.32
SCN3B-203ENST00000527125 NCOA1Q15788 1441 aa13.06□□□□□ -0.32
SCN3B-203ENST00000527125 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
SCN3B-203ENST00000527125 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
SCN3B-203ENST00000527125 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
SCN3B-203ENST00000527125 WASHC2AQ641Q2 1341 aa13.04□□□□□ -0.32
SCN3B-203ENST00000527125 TEX14Q8IWB6 1497 aa13.03□□□□□ -0.32
SCN3B-203ENST00000527125 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
SCN3B-203ENST00000527125 TONSLQ96HA7 1378 aa13.02□□□□□ -0.33
SCN3B-203ENST00000527125 FAM50AQ14320 339 aaKnown RBP13.01□□□□□ -0.33
SCN3B-203ENST00000527125 HIRIP3Q9BW71 556 aaPredicted RBP13□□□□□ -0.33
SCN3B-203ENST00000527125 TARBP1Q13395 1621 aaKnown RBP13□□□□□ -0.33
SCN3B-203ENST00000527125 MBD5Q9P267 1494 aa13□□□□□ -0.33
SCN3B-203ENST00000527125 URB2Q14146 1524 aaKnown RBP12.99□□□□□ -0.33
SCN3B-203ENST00000527125 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
SCN3B-203ENST00000527125 NESP48681 1621 aa12.99□□□□□ -0.33
SCN3B-203ENST00000527125 NEFLP07196 543 aa12.98□□□□□ -0.33
SCN3B-203ENST00000527125 BCORL1Q5H9F3 1711 aa12.97□□□□□ -0.33
SCN3B-203ENST00000527125 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
SCN3B-203ENST00000527125 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
SCN3B-203ENST00000527125 WDR62O43379 1518 aa12.97□□□□□ -0.33
SCN3B-203ENST00000527125 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
SCN3B-203ENST00000527125 MIA2Q96PC5 1412 aa12.96□□□□□ -0.33
SCN3B-203ENST00000527125 E9PCH4 1651 aa12.96□□□□□ -0.34
SCN3B-203ENST00000527125 CROCC2H7BZ55 1655 aa12.94□□□□□ -0.34
SCN3B-203ENST00000527125 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
SCN3B-203ENST00000527125 CCDC184Q52MB2 194 aa12.94□□□□□ -0.34
SCN3B-203ENST00000527125 ADGBQ8N7X0 1667 aa12.93□□□□□ -0.34
SCN3B-203ENST00000527125 HSPA5P11021 654 aaKnown RBP12.93□□□□□ -0.34
SCN3B-203ENST00000527125 ZBED9Q6R2W3 1325 aa12.92□□□□□ -0.34
SCN3B-203ENST00000527125 C11orf95C9JLR9 678 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms