RNA–Protein interactions for RNA: ENST00000526940.1

NFRKB-205, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 2 BASIC

Gene NFRKB, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-205ENST00000526940 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
NFRKB-205ENST00000526940 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
NFRKB-205ENST00000526940 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
NFRKB-205ENST00000526940 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
NFRKB-205ENST00000526940 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
NFRKB-205ENST00000526940 TOPBP1Q92547 1522 aa17.24■□□□□ 0.35
NFRKB-205ENST00000526940 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
NFRKB-205ENST00000526940 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
NFRKB-205ENST00000526940 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
NFRKB-205ENST00000526940 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
NFRKB-205ENST00000526940 CUX1P39880 1505 aa17.12■□□□□ 0.33
NFRKB-205ENST00000526940 PROM2Q8N271 834 aa17.12■□□□□ 0.33
NFRKB-205ENST00000526940 TARBP1Q13395 1621 aaKnown RBP17.11■□□□□ 0.33
NFRKB-205ENST00000526940 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
NFRKB-205ENST00000526940 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
NFRKB-205ENST00000526940 IFT140Q96RY7 1462 aa17.08■□□□□ 0.32
NFRKB-205ENST00000526940 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
NFRKB-205ENST00000526940 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
NFRKB-205ENST00000526940 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
NFRKB-205ENST00000526940 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
NFRKB-205ENST00000526940 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
NFRKB-205ENST00000526940 BIVM-ERCC5R4GMW8 1640 aa17.01■□□□□ 0.31
NFRKB-205ENST00000526940 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
NFRKB-205ENST00000526940 SYNJ1O43426 1573 aa17■□□□□ 0.31
NFRKB-205ENST00000526940 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
NFRKB-205ENST00000526940 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
NFRKB-205ENST00000526940 SOGA1O94964 1423 aa16.94■□□□□ 0.3
NFRKB-205ENST00000526940 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.32e-10■■■■□ 22.5
NFRKB-205ENST00000526940 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
NFRKB-205ENST00000526940 REM2Q8IYK8 340 aaPredicted RBP16.89■□□□□ 0.29
NFRKB-205ENST00000526940 CHD1O14646 1710 aa16.89■□□□□ 0.29
NFRKB-205ENST00000526940 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
NFRKB-205ENST00000526940 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
NFRKB-205ENST00000526940 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
NFRKB-205ENST00000526940 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
NFRKB-205ENST00000526940 SP7Q8TDD2 431 aaPredicted RBP16.85■□□□□ 0.29
NFRKB-205ENST00000526940 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
NFRKB-205ENST00000526940 FBXO3Q9UK99 471 aa16.78■□□□□ 0.28
NFRKB-205ENST00000526940 GRIN2BQ13224 1484 aa16.77■□□□□ 0.28
NFRKB-205ENST00000526940 GAPVD1Q14C86 1478 aa16.77■□□□□ 0.28
NFRKB-205ENST00000526940 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
NFRKB-205ENST00000526940 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
NFRKB-205ENST00000526940 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
NFRKB-205ENST00000526940 ADAMTS12P58397 1594 aa16.7■□□□□ 0.26
NFRKB-205ENST00000526940 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
NFRKB-205ENST00000526940 SYNJ2O15056 1496 aa16.67■□□□□ 0.26
NFRKB-205ENST00000526940 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
NFRKB-205ENST00000526940 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
NFRKB-205ENST00000526940 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
NFRKB-205ENST00000526940 RIMBP3CA6NJZ7 1639 aa16.65■□□□□ 0.26
NFRKB-205ENST00000526940 RIMBP3BA6NNM3 1639 aa16.65■□□□□ 0.26
NFRKB-205ENST00000526940 RIMBP3Q9UFD9 1639 aa16.65■□□□□ 0.26
NFRKB-205ENST00000526940 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
NFRKB-205ENST00000526940 GRIN2AQ12879 1464 aa16.59■□□□□ 0.25
NFRKB-205ENST00000526940 CEP170Q5SW79 1584 aa16.58■□□□□ 0.24
NFRKB-205ENST00000526940 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
NFRKB-205ENST00000526940 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
NFRKB-205ENST00000526940 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
NFRKB-205ENST00000526940 PRR29P0C7W0 189 aa16.54■□□□□ 0.24
NFRKB-205ENST00000526940 CUL7Q14999 1698 aa16.53■□□□□ 0.24
NFRKB-205ENST00000526940 NUP160Q12769 1436 aa16.53■□□□□ 0.24
NFRKB-205ENST00000526940 KIF27Q86VH2 1401 aa16.52■□□□□ 0.23
NFRKB-205ENST00000526940 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
NFRKB-205ENST00000526940 IGF1RP08069 1367 aa16.49■□□□□ 0.23
NFRKB-205ENST00000526940 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
NFRKB-205ENST00000526940 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
NFRKB-205ENST00000526940 ERCC6L2Q5T890 1561 aa16.45■□□□□ 0.22
NFRKB-205ENST00000526940 MIER1Q8N108 512 aa16.43■□□□□ 0.22
NFRKB-205ENST00000526940 PIP4P2Q8N4L2 257 aa16.43■□□□□ 0.22
NFRKB-205ENST00000526940 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
NFRKB-205ENST00000526940 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
NFRKB-205ENST00000526940 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
NFRKB-205ENST00000526940 CREBZFQ9NS37 354 aa16.38■□□□□ 0.21
NFRKB-205ENST00000526940 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
NFRKB-205ENST00000526940 IFNLR1Q8IU57 520 aaPredicted RBP16.36■□□□□ 0.21
NFRKB-205ENST00000526940 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
NFRKB-205ENST00000526940 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
NFRKB-205ENST00000526940 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
NFRKB-205ENST00000526940 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
NFRKB-205ENST00000526940 CTTNBP2Q8WZ74 1663 aa16.29■□□□□ 0.2
NFRKB-205ENST00000526940 HAX1O00165 279 aa16.28■□□□□ 0.2
NFRKB-205ENST00000526940 CHADLQ6NUI6 762 aa16.28■□□□□ 0.2
NFRKB-205ENST00000526940 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
NFRKB-205ENST00000526940 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
NFRKB-205ENST00000526940 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
NFRKB-205ENST00000526940 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
NFRKB-205ENST00000526940 MNX1P50219 401 aaPredicted RBP16.24■□□□□ 0.19
NFRKB-205ENST00000526940 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
NFRKB-205ENST00000526940 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
NFRKB-205ENST00000526940 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
NFRKB-205ENST00000526940 EVX2Q03828 476 aa16.19■□□□□ 0.18
NFRKB-205ENST00000526940 UGGT2Q9NYU1 1516 aa16.18■□□□□ 0.18
NFRKB-205ENST00000526940 EEA1Q15075 1411 aa16.18■□□□□ 0.18
NFRKB-205ENST00000526940 DISP1Q96F81 1524 aa16.17■□□□□ 0.18
NFRKB-205ENST00000526940 KIAA0556O60303 1618 aa16.16■□□□□ 0.18
NFRKB-205ENST00000526940 ADCY10Q96PN6 1610 aa16.16■□□□□ 0.18
NFRKB-205ENST00000526940 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
NFRKB-205ENST00000526940 KIF21BO75037 1637 aa16.14■□□□□ 0.17
NFRKB-205ENST00000526940 SPOCK2Q92563 424 aa16.13■□□□□ 0.17
NFRKB-205ENST00000526940 NPM1P06748 294 aaKnown RBP eCLIP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms