RNA–Protein interactions for RNA: ENST00000526702.1

SNX15-205, Transcript of sorting nexin 15, humanhuman

TSL 2

Gene SNX15, Length 4,713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-205ENST00000526702 RAPGEF2Q9Y4G8 1499 aa16.82■□□□□ 0.28
SNX15-205ENST00000526702 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
SNX15-205ENST00000526702 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
SNX15-205ENST00000526702 CFDP1Q9UEE9 299 aaPredicted RBP16.8■□□□□ 0.28
SNX15-205ENST00000526702 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
SNX15-205ENST00000526702 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
SNX15-205ENST00000526702 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNX15-205ENST00000526702 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
SNX15-205ENST00000526702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNX15-205ENST00000526702 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
SNX15-205ENST00000526702 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
SNX15-205ENST00000526702 SETD5Q9C0A6 1442 aa16.75■□□□□ 0.27
SNX15-205ENST00000526702 ARHGAP35Q9NRY4 1499 aa16.75■□□□□ 0.27
SNX15-205ENST00000526702 FKBP8Q14318 412 aa16.74■□□□□ 0.27
SNX15-205ENST00000526702 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
SNX15-205ENST00000526702 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
SNX15-205ENST00000526702 HIRIP3Q9BW71 556 aaPredicted RBP16.72■□□□□ 0.27
SNX15-205ENST00000526702 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
SNX15-205ENST00000526702 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
SNX15-205ENST00000526702 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
SNX15-205ENST00000526702 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
SNX15-205ENST00000526702 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
SNX15-205ENST00000526702 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
SNX15-205ENST00000526702 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
SNX15-205ENST00000526702 CHGAP10645 457 aaKnown RBP16.65■□□□□ 0.26
SNX15-205ENST00000526702 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
SNX15-205ENST00000526702 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
SNX15-205ENST00000526702 NEFMP07197 916 aa16.62■□□□□ 0.25
SNX15-205ENST00000526702 CANXP27824 592 aaKnown RBP16.6■□□□□ 0.25
SNX15-205ENST00000526702 CARMIL2Q6F5E8 1435 aa16.59■□□□□ 0.25
SNX15-205ENST00000526702 IGF1RP08069 1367 aa16.59■□□□□ 0.25
SNX15-205ENST00000526702 FHOD3Q2V2M9 1422 aa16.59■□□□□ 0.25
SNX15-205ENST00000526702 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
SNX15-205ENST00000526702 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
SNX15-205ENST00000526702 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
SNX15-205ENST00000526702 KIF21BO75037 1637 aa16.54■□□□□ 0.24
SNX15-205ENST00000526702 CFTRP13569 1480 aa16.53■□□□□ 0.24
SNX15-205ENST00000526702 CARD11Q9BXL7 1154 aa16.52■□□□□ 0.24
SNX15-205ENST00000526702 RGL3Q3MIN7 710 aa16.51■□□□□ 0.23
SNX15-205ENST00000526702 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
SNX15-205ENST00000526702 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNX15-205ENST00000526702 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
SNX15-205ENST00000526702 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
SNX15-205ENST00000526702 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
SNX15-205ENST00000526702 DHX57Q6P158 1386 aaKnown RBP16.48■□□□□ 0.23
SNX15-205ENST00000526702 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
SNX15-205ENST00000526702 CCER2I3L3R5 266 aa16.47■□□□□ 0.23
SNX15-205ENST00000526702 ZBTB47Q9UFB7 747 aaPredicted RBP16.47■□□□□ 0.23
SNX15-205ENST00000526702 PPP1R15AO75807 674 aaPredicted RBP16.45■□□□□ 0.22
SNX15-205ENST00000526702 CCDC136Q96JN2 1154 aa16.45■□□□□ 0.22
SNX15-205ENST00000526702 SALL2Q9Y467 1007 aaPredicted RBP16.45■□□□□ 0.22
SNX15-205ENST00000526702 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
SNX15-205ENST00000526702 MPHOSPH9Q99550 1183 aa16.44■□□□□ 0.22
SNX15-205ENST00000526702 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
SNX15-205ENST00000526702 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
SNX15-205ENST00000526702 TOP2BQ02880 1626 aa16.42■□□□□ 0.22
SNX15-205ENST00000526702 RAD54L2Q9Y4B4 1467 aa16.41■□□□□ 0.22
SNX15-205ENST00000526702 ANKRD30AQ9BXX3 1397 aa16.41■□□□□ 0.22
SNX15-205ENST00000526702 BICRAQ9NZM4 1560 aa16.41■□□□□ 0.22
SNX15-205ENST00000526702 PRXQ9BXM0 1461 aa16.4■□□□□ 0.22
SNX15-205ENST00000526702 HSPA5P11021 654 aaKnown RBP16.39■□□□□ 0.21
SNX15-205ENST00000526702 PKD2Q13563 968 aa16.39■□□□□ 0.21
SNX15-205ENST00000526702 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
SNX15-205ENST00000526702 DCAF11Q8TEB1 546 aa16.37■□□□□ 0.21
SNX15-205ENST00000526702 KNSTRNQ9Y448 316 aa16.37■□□□□ 0.21
SNX15-205ENST00000526702 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
SNX15-205ENST00000526702 RSPH4AQ5TD94 716 aa16.36■□□□□ 0.21
SNX15-205ENST00000526702 IRX6P78412 446 aaPredicted RBP16.34■□□□□ 0.21
SNX15-205ENST00000526702 KANK1Q14678 1352 aa16.33■□□□□ 0.2
SNX15-205ENST00000526702 FOXD1Q16676 465 aa16.33■□□□□ 0.2
SNX15-205ENST00000526702 SUPT16HQ9Y5B9 1047 aaKnown RBP16.33■□□□□ 0.2
SNX15-205ENST00000526702 CUX1P39880 1505 aa16.32■□□□□ 0.2
SNX15-205ENST00000526702 PEG3Q9GZU2 1588 aa16.32■□□□□ 0.2
SNX15-205ENST00000526702 NUP155O75694 1391 aa16.32■□□□□ 0.2
SNX15-205ENST00000526702 ARAP1Q96P48 1450 aa16.32■□□□□ 0.2
SNX15-205ENST00000526702 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
SNX15-205ENST00000526702 LRRC9Q6ZRR7 1453 aa16.31■□□□□ 0.2
SNX15-205ENST00000526702 NPM2Q86SE8 214 aaKnown RBP16.3■□□□□ 0.2
SNX15-205ENST00000526702 CASKIN1Q8WXD9 1431 aa16.3■□□□□ 0.2
SNX15-205ENST00000526702 TMF1P82094 1093 aa16.29■□□□□ 0.2
SNX15-205ENST00000526702 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
SNX15-205ENST00000526702 FGD6Q6ZV73 1430 aa16.27■□□□□ 0.2
SNX15-205ENST00000526702 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.19
SNX15-205ENST00000526702 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
SNX15-205ENST00000526702 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
SNX15-205ENST00000526702 CFAP53Q96M91 514 aa16.25■□□□□ 0.19
SNX15-205ENST00000526702 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
SNX15-205ENST00000526702 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
SNX15-205ENST00000526702 UPF2Q9HAU5 1272 aaKnown RBP16.24■□□□□ 0.19
SNX15-205ENST00000526702 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
SNX15-205ENST00000526702 TOPBP1Q92547 1522 aa16.22■□□□□ 0.19
SNX15-205ENST00000526702 EFCAB5A4FU69 1503 aa16.22■□□□□ 0.19
SNX15-205ENST00000526702 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
SNX15-205ENST00000526702 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
SNX15-205ENST00000526702 PTPRGP23470 1445 aa16.2■□□□□ 0.18
SNX15-205ENST00000526702 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNX15-205ENST00000526702 POLA1P09884 1462 aaPredicted RBP16.19■□□□□ 0.18
SNX15-205ENST00000526702 NESP48681 1621 aa16.18■□□□□ 0.18
SNX15-205ENST00000526702 ROCK2O75116 1388 aaKnown RBP16.18■□□□□ 0.18
SNX15-205ENST00000526702 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms